Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2922

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
3,415,021	-		Pf6N2E2_2921	0.11	-0.2
3,415,028	+		Pf6N2E2_2921	0.12	+1.0
3,415,122	-		Pf6N2E2_2921	0.20	-1.0
3,415,241	+		Pf6N2E2_2921	0.31	-1.0
3,415,241	+		Pf6N2E2_2921	0.31	+1.0
3,415,241	+		Pf6N2E2_2921	0.31	+1.0
3,415,241	+		Pf6N2E2_2921	0.31	-1.0
3,415,241	+		Pf6N2E2_2921	0.31	-0.7
3,415,241	+		Pf6N2E2_2921	0.31	+1.0
3,415,241	+		Pf6N2E2_2921	0.31	-0.6
3,415,241	+		Pf6N2E2_2921	0.31	-0.6
3,415,241	+		Pf6N2E2_2921	0.31	-1.0
3,415,241	+		Pf6N2E2_2921	0.31	+1.0
3,415,241	+		Pf6N2E2_2921	0.31	-0.6
3,415,241	+		Pf6N2E2_2921	0.31	-0.8
3,415,241	+		Pf6N2E2_2921	0.31	+1.0
3,415,241	+		Pf6N2E2_2921	0.31	+0.1
3,415,241	+		Pf6N2E2_2921	0.31	-0.0
3,415,241	+		Pf6N2E2_2921	0.31	+1.0
3,415,242	-		Pf6N2E2_2921	0.31	+1.0
3,415,242	-		Pf6N2E2_2921	0.31	-1.0
3,415,242	-		Pf6N2E2_2921	0.31	+1.0
3,415,242	-		Pf6N2E2_2921	0.31	-0.0
3,415,242	-		Pf6N2E2_2921	0.31	-1.3
3,415,242	-		Pf6N2E2_2921	0.31	+1.0
3,415,367	+		Pf6N2E2_2921	0.42	-0.0
3,415,367	+		Pf6N2E2_2921	0.42	-0.0
3,415,367	+		Pf6N2E2_2921	0.42	-0.0
3,415,367	+		Pf6N2E2_2921	0.42	-0.0
3,415,367	+		Pf6N2E2_2921	0.42	+1.0
3,415,367	+		Pf6N2E2_2921	0.42	+0.6
3,415,368	-		Pf6N2E2_2921	0.42	+1.0
3,415,368	-		Pf6N2E2_2921	0.42	-0.2
3,415,368	-		Pf6N2E2_2921	0.42	+1.0
3,415,368	-		Pf6N2E2_2921	0.42	+1.0
3,415,368	-		Pf6N2E2_2921	0.42	+1.0
3,415,368	-		Pf6N2E2_2921	0.42	-0.8
3,415,368	-		Pf6N2E2_2921	0.42	-0.0
3,415,368	-		Pf6N2E2_2921	0.42	-0.0
3,415,424	+		Pf6N2E2_2921	0.47	-0.0
3,415,424	+		Pf6N2E2_2921	0.47	-0.0
3,415,425	-		Pf6N2E2_2921	0.47	-0.8
3,415,568	+		Pf6N2E2_2921	0.60	+1.0
3,415,571	+		Pf6N2E2_2921	0.60	-0.0
3,415,664	-		Pf6N2E2_2921	0.68	-0.0
3,415,714	-		Pf6N2E2_2921	0.73	-0.6
3,415,977	-				-1.6
3,415,977	-				+1.0
3,415,999	+				-1.3
3,416,000	-				-0.0
3,416,047	+		Pf6N2E2_2922	0.18	-2.0
3,416,078	+		Pf6N2E2_2922	0.29	-1.0
3,416,079	-		Pf6N2E2_2922	0.30	-1.1
3,416,079	-		Pf6N2E2_2922	0.30	+1.0
3,416,085	-		Pf6N2E2_2922	0.32	-1.3
3,416,229	+		Pf6N2E2_2922	0.85	+1.0
3,416,230	-		Pf6N2E2_2922	0.85	-1.2
3,416,265	+				+1.0
3,416,265	+				+1.0
3,416,266	-				-0.0
3,416,266	-				+0.6
3,416,266	-				-0.0
3,416,266	-				-0.0
3,416,313	+				+1.0
3,416,313	+				+1.0
3,416,313	+				-1.0
3,416,314	-				-1.1
3,416,314	-				-2.2
3,416,314	-				-0.9
3,416,314	-				-0.0
3,416,314	-				-0.0
3,416,314	-				+1.0
3,416,314	-				-0.5
3,416,314	-				-0.0
3,416,334	+				-0.0
3,416,335	-				-1.0
3,416,336	+				+1.0
3,416,337	-				-0.9
3,416,337	-				-0.0
3,416,337	-				-0.0
3,416,337	-				-0.6
3,416,337	-				-2.6
3,416,347	-		Pf6N2E2_2923	0.10	+1.0
3,416,347	-		Pf6N2E2_2923	0.10	+1.0
3,416,388	+		Pf6N2E2_2923	0.15	+1.0
3,416,388	+		Pf6N2E2_2923	0.15	-0.6
3,416,388	+		Pf6N2E2_2923	0.15	-1.0
3,416,388	+		Pf6N2E2_2923	0.15	+1.0
3,416,388	+		Pf6N2E2_2923	0.15	+1.0
3,416,388	+		Pf6N2E2_2923	0.15	+1.0
3,416,389	-		Pf6N2E2_2923	0.15	-0.0
3,416,389	-		Pf6N2E2_2923	0.15	-0.0
3,416,389	-		Pf6N2E2_2923	0.15	+1.0
3,416,389	-		Pf6N2E2_2923	0.15	+0.1
3,416,389	-		Pf6N2E2_2923	0.15	+0.4
3,416,389	-		Pf6N2E2_2923	0.15	+1.0
3,416,389	-		Pf6N2E2_2923	0.15	+1.0
3,416,389	-		Pf6N2E2_2923	0.15	-0.0
3,416,389	-		Pf6N2E2_2923	0.15	-0.6
3,416,389	-		Pf6N2E2_2923	0.15	-1.0
3,416,389	-		Pf6N2E2_2923	0.15	-0.0
3,416,403	+		Pf6N2E2_2923	0.16	-0.6
3,416,404	-		Pf6N2E2_2923	0.16	-0.6
3,416,404	-		Pf6N2E2_2923	0.16	+1.0
3,416,404	-		Pf6N2E2_2923	0.16	+1.0
3,416,404	-		Pf6N2E2_2923	0.16	-0.0
3,416,404	-		Pf6N2E2_2923	0.16	+1.0
3,416,508	+		Pf6N2E2_2923	0.28	-0.0
3,416,712	+		Pf6N2E2_2923	0.50	+1.0
3,416,712	+		Pf6N2E2_2923	0.50	+1.0
3,416,712	+		Pf6N2E2_2923	0.50	+1.0
3,416,928	+		Pf6N2E2_2923	0.73	-0.9
3,416,929	-		Pf6N2E2_2923	0.73	-1.0
3,417,084	+				-0.9
3,417,084	+				-2.6
3,417,084	+				-0.0
3,417,085	-				+1.0
3,417,085	-				-0.1
3,417,172	+				-1.0
3,417,172	+				+1.0
3,417,172	+				-0.6
3,417,173	-				-0.6
3,417,173	-				-0.6
3,417,173	-				-0.0
3,417,178	+				-0.0
3,417,179	-				-2.4
3,417,179	-				-0.5
3,417,179	-				-0.4
3,417,179	-				-0.0
3,417,179	-				-1.6
3,417,247	+				-0.0
3,417,248	-				-0.6
3,417,248	-				-0.6
3,417,265	+				-0.0