Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2878

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
3,365,131	+				-0.7
3,365,239	-				-1.0
3,365,239	-				+1.0
3,365,239	-				-2.1
3,365,538	+		Pf6N2E2_2877	0.35	-1.3
3,365,538	+		Pf6N2E2_2877	0.35	-2.0
3,365,538	+		Pf6N2E2_2877	0.35	-2.2
3,365,538	+		Pf6N2E2_2877	0.35	-1.3
3,365,538	+		Pf6N2E2_2877	0.35	-0.7
3,365,538	+		Pf6N2E2_2877	0.35	-0.0
3,365,538	+		Pf6N2E2_2877	0.35	-0.9
3,365,538	+		Pf6N2E2_2877	0.35	+1.0
3,365,539	-		Pf6N2E2_2877	0.35	-0.0
3,365,539	-		Pf6N2E2_2877	0.35	-0.0
3,365,539	-		Pf6N2E2_2877	0.35	+1.0
3,365,539	-		Pf6N2E2_2877	0.35	-0.7
3,365,539	-		Pf6N2E2_2877	0.35	-0.7
3,365,539	-		Pf6N2E2_2877	0.35	-3.1
3,365,539	-		Pf6N2E2_2877	0.35	+1.0
3,365,539	-		Pf6N2E2_2877	0.35	+1.0
3,365,589	+		Pf6N2E2_2877	0.41	-3.8
3,365,589	+		Pf6N2E2_2877	0.41	-1.0
3,365,590	-		Pf6N2E2_2877	0.41	+1.0
3,365,590	-		Pf6N2E2_2877	0.41	-0.0
3,365,590	-		Pf6N2E2_2877	0.41	+0.2
3,365,590	-		Pf6N2E2_2877	0.41	+1.0
3,366,018	+				-0.0
3,366,018	+				+1.0
3,366,019	-				-0.0
3,366,019	-				-2.3
3,366,019	-				-0.0
3,366,019	-				+1.0
3,366,019	-				-2.7
3,366,019	-				-0.0
3,366,019	-				+1.0
3,366,019	-				+1.0
3,366,019	-				+1.0
3,366,019	-				-0.0
3,366,019	-				-0.0
3,366,022	-				+1.0
3,366,086	+				+1.0
3,366,087	-				+0.1
3,366,094	+				+1.0
3,366,094	+				-0.0
3,366,094	+				-0.0
3,366,094	+				+1.0
3,366,094	+				-0.0
3,366,094	+				+1.0
3,366,094	+				+1.0
3,366,094	+				-0.6
3,366,095	-				-0.0
3,366,095	-				-0.0
3,366,095	-				+1.0
3,366,095	-				+0.4
3,366,095	-				-0.6
3,366,095	-				-0.0
3,366,095	-				-0.3
3,366,095	-				-0.3
3,366,111	+				-0.0
3,366,111	+				-1.3
3,366,112	-				-0.8
3,366,134	-		Pf6N2E2_2878	0.12	-1.1
3,366,137	-		Pf6N2E2_2878	0.13	+1.0
3,366,156	+		Pf6N2E2_2878	0.22	-0.0
3,366,156	+		Pf6N2E2_2878	0.22	-0.0
3,366,156	+		Pf6N2E2_2878	0.22	-0.6
3,366,261	+		Pf6N2E2_2878	0.73	-2.2
3,366,262	-		Pf6N2E2_2878	0.73	+1.0
3,366,262	-		Pf6N2E2_2878	0.73	+1.0
3,366,661	+		Pf6N2E2_2879	0.18	-1.0
3,366,889	+		Pf6N2E2_2879	0.29	+1.0
3,366,889	+		Pf6N2E2_2879	0.29	+1.0
3,366,889	+		Pf6N2E2_2879	0.29	+1.0
3,366,890	-		Pf6N2E2_2879	0.29	+1.0
3,366,958	-		Pf6N2E2_2879	0.33	-0.0
3,367,048	-		Pf6N2E2_2879	0.37	-0.0
3,367,048	-		Pf6N2E2_2879	0.37	-0.9