Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2246

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
2,658,100	+				+1.0
2,658,220	+		Pf6N2E2_2244	0.40	-0.0
2,658,221	-				+1.0
2,658,353	+		Pf6N2E2_2244	0.86	-0.0
2,658,390	+				+1.0
2,658,418	+				-0.3
2,658,418	+				+1.0
2,658,418	+				-0.0
2,658,418	+				+1.0
2,658,418	+				+1.0
2,658,418	+				+1.0
2,658,418	+				-0.0
2,658,418	+				+1.0
2,658,419	-				-0.0
2,658,419	-				-0.9
2,658,419	-				+1.0
2,658,419	-				+1.0
2,658,419	-				+1.0
2,658,446	+				+1.0
2,658,491	+				+1.0
2,658,492	-				-0.0
2,658,492	-				+1.0
2,658,502	+				-0.8
2,658,502	+				-0.0
2,658,503	-				+1.0
2,658,503	-				+1.0
2,658,503	-				-1.0
2,658,503	-				-0.3
2,658,545	-				-0.4
2,658,633	+		Pf6N2E2_2245	0.22	-2.0
2,658,633	+		Pf6N2E2_2245	0.22	-0.0
2,658,643	-		Pf6N2E2_2245	0.24	-0.0
2,658,715	+		Pf6N2E2_2245	0.39	-0.0
2,658,715	+		Pf6N2E2_2245	0.39	+1.0
2,658,715	+		Pf6N2E2_2245	0.39	+1.0
2,658,715	+		Pf6N2E2_2245	0.39	+0.1
2,658,715	+		Pf6N2E2_2245	0.39	+1.0
2,658,715	+		Pf6N2E2_2245	0.39	+1.0
2,658,716	-		Pf6N2E2_2245	0.39	-0.6
2,658,716	-		Pf6N2E2_2245	0.39	-0.0
2,658,716	-		Pf6N2E2_2245	0.39	+1.0
2,658,744	+		Pf6N2E2_2245	0.45	+1.0
2,658,744	+		Pf6N2E2_2245	0.45	+1.0
2,658,750	+		Pf6N2E2_2245	0.46	+1.0
2,658,750	+		Pf6N2E2_2245	0.46	-0.6
2,658,750	+		Pf6N2E2_2245	0.46	-0.0
2,658,751	-		Pf6N2E2_2245	0.46	+1.0
2,658,751	-		Pf6N2E2_2245	0.46	-0.0
2,658,751	-		Pf6N2E2_2245	0.46	-0.5
2,658,751	-		Pf6N2E2_2245	0.46	-0.0
2,658,839	+		Pf6N2E2_2245	0.64	+1.0
2,658,839	+		Pf6N2E2_2245	0.64	-0.4
2,658,839	+		Pf6N2E2_2245	0.64	+1.0
2,658,839	+		Pf6N2E2_2245	0.64	+0.2
2,658,839	+		Pf6N2E2_2245	0.64	-1.0
2,658,839	+		Pf6N2E2_2245	0.64	-1.3
2,658,839	+		Pf6N2E2_2245	0.64	-0.6
2,658,839	+		Pf6N2E2_2245	0.64	+1.0
2,658,839	+		Pf6N2E2_2245	0.64	+1.0
2,658,840	-		Pf6N2E2_2245	0.64	-0.8
2,658,840	-		Pf6N2E2_2245	0.64	-0.0
2,658,840	-		Pf6N2E2_2245	0.64	+1.0
2,658,840	-		Pf6N2E2_2245	0.64	-0.9
2,658,840	-		Pf6N2E2_2245	0.64	-0.4
2,658,840	-		Pf6N2E2_2245	0.64	-0.6
2,658,840	-		Pf6N2E2_2245	0.64	+1.0
2,658,840	-		Pf6N2E2_2245	0.64	-0.0
2,658,840	-		Pf6N2E2_2245	0.64	-0.5
2,658,840	-		Pf6N2E2_2245	0.64	+1.0
2,658,840	-		Pf6N2E2_2245	0.64	+1.0
2,658,840	-		Pf6N2E2_2245	0.64	-0.3
2,658,840	-		Pf6N2E2_2245	0.64	+1.0
2,658,851	+		Pf6N2E2_2245	0.67	+1.0
2,658,851	+		Pf6N2E2_2245	0.67	-0.0
2,658,851	+		Pf6N2E2_2245	0.67	-0.0
2,658,851	+		Pf6N2E2_2245	0.67	+1.5
2,658,852	-		Pf6N2E2_2245	0.67	-0.0
2,658,852	-		Pf6N2E2_2245	0.67	-0.6
2,659,055	+				+1.0
2,659,056	-				-0.6
2,659,083	+				+1.0
2,659,084	-				-0.8
2,659,087	+				+1.0
2,659,088	-				-0.9
2,659,088	-				+0.1
2,659,088	-				-0.0
2,659,107	+				+1.0
2,659,107	+				+1.0
2,659,124	-				-0.0
2,659,355	+		Pf6N2E2_2246	0.22	+1.0
2,659,355	+		Pf6N2E2_2246	0.22	-1.4
2,659,614	+		Pf6N2E2_2246	0.43	-0.0
2,659,614	+		Pf6N2E2_2246	0.43	-0.6
2,659,615	-		Pf6N2E2_2246	0.43	-0.0
2,659,615	-		Pf6N2E2_2246	0.43	+1.0
2,659,615	-		Pf6N2E2_2246	0.43	-0.6
2,659,615	-		Pf6N2E2_2246	0.43	+1.0
2,660,004	+		Pf6N2E2_2246	0.75	+1.0
2,660,261	+				+1.0
2,660,262	-				+1.0
2,660,325	-				-1.5
2,660,325	-				+1.0
2,660,430	+				+1.0
2,660,431	-				-1.2
2,660,516	+				-0.0
2,660,517	-				+1.0
2,660,554	-				+1.0
2,660,578	-				+1.0
2,660,578	-				-1.2
2,660,578	-				-0.7
2,660,597	-				-1.0
2,660,598	+				-0.0
2,660,599	-				-0.0
2,660,614	+				-1.3
2,660,615	-				+1.0
2,660,622	+				+1.0
2,660,622	+				+1.0
2,660,622	+				+0.6
2,660,634	+				-2.0
2,660,692	+				-1.0
2,660,877	+				+1.0
2,660,878	-				+0.1
2,660,878	-				-0.6
2,661,285	+		Pf6N2E2_2247	0.61	+1.0
2,661,286	-		Pf6N2E2_2247	0.61	+0.6
2,661,286	-		Pf6N2E2_2247	0.61	-0.6