Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22600

Experiment: L-tyrosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (C) 10 mM
5,087,668	-		PFLU_RS22595	0.10	+1.3
5,087,668	-		PFLU_RS22595	0.10	+1.3
5,087,718	-		PFLU_RS22595	0.15	+1.3
5,087,756	-		PFLU_RS22595	0.19	+1.3
5,087,756	-		PFLU_RS22595	0.19	+1.3
5,087,756	-		PFLU_RS22595	0.19	+1.3
5,087,770	-		PFLU_RS22595	0.21	+1.3
5,087,796	+		PFLU_RS22595	0.23	+1.3
5,087,797	-		PFLU_RS22595	0.23	+1.3
5,087,805	-		PFLU_RS22595	0.24	+1.3
5,087,805	-		PFLU_RS22595	0.24	+1.3
5,087,805	-		PFLU_RS22595	0.24	+1.3
5,087,805	-		PFLU_RS22595	0.24	+1.3
5,087,859	-		PFLU_RS22595	0.30	+1.3
5,087,859	-		PFLU_RS22595	0.30	+1.3
5,087,865	-		PFLU_RS22595	0.30	+1.3
5,087,892	-		PFLU_RS22595	0.33	+1.3
5,088,140	+		PFLU_RS22595	0.58	+1.3
5,088,431	-		PFLU_RS22595	0.88	+1.3
5,088,575	-				+1.3
5,088,617	-				+1.3
5,088,631	-				+1.3
5,088,636	+				-0.0
5,088,636	+				+1.9
5,088,636	+				+0.3
5,088,636	+				+1.3
5,088,637	-				+1.3
5,088,637	-				+1.3
5,088,637	-				+1.3
5,088,637	-				-0.3
5,088,637	-				+1.3
5,088,637	-				+1.6
5,088,643	+				+2.3
5,088,643	+				+3.3
5,088,643	+				+2.3
5,088,644	-				+1.3
5,088,644	-				+0.3
5,088,644	-				+0.7
5,088,644	-				-0.3
5,088,644	-				+1.9
5,088,657	+				-0.7
5,088,657	+				+3.3
5,088,657	+				+0.7
5,088,658	-				-0.0
5,088,658	-				+1.6
5,088,658	-				-0.3
5,088,690	-				+1.3
5,088,712	-				+1.3
5,088,822	+		PFLU_RS22600	0.28	+1.3
5,088,823	-		PFLU_RS22600	0.28	-1.9
5,088,823	-		PFLU_RS22600	0.28	-1.7
5,088,823	-		PFLU_RS22600	0.28	-0.3
5,088,967	-		PFLU_RS22600	0.53	-0.3
5,088,979	-		PFLU_RS22600	0.55	+2.3
5,088,979	-		PFLU_RS22600	0.55	+1.3
5,088,979	-		PFLU_RS22600	0.55	-1.0
5,089,027	-		PFLU_RS22600	0.63	+1.3
5,089,083	-		PFLU_RS22600	0.72	-2.0
5,089,083	-		PFLU_RS22600	0.72	-1.0
5,089,083	-		PFLU_RS22600	0.72	-1.2
5,089,087	-		PFLU_RS22600	0.73	-0.3
5,089,087	-		PFLU_RS22600	0.73	-0.3
5,089,120	-		PFLU_RS22600	0.79	+0.7
5,089,152	-		PFLU_RS22600	0.84	+0.6
5,089,216	-				-0.1
5,089,216	-				-1.3
5,089,216	-				+0.3
5,089,312	+				+0.7
5,089,312	+				+1.3
5,089,312	+				+0.3
5,089,313	-				-0.3
5,089,313	-				+0.8
5,089,313	-				-1.1
5,089,317	+				-1.0
5,089,317	+				+1.3
5,089,317	+				+3.3
5,089,317	+				+2.0
5,089,318	-				-2.8
5,089,342	+				+0.9
5,089,482	+		PFLU_RS22605	0.18	-1.0
5,089,482	+		PFLU_RS22605	0.18	+0.9
5,089,483	-		PFLU_RS22605	0.18	-2.4
5,089,483	-		PFLU_RS22605	0.18	-2.8
5,089,497	+		PFLU_RS22605	0.20	-0.0
5,089,497	+		PFLU_RS22605	0.20	-1.3
5,089,497	+		PFLU_RS22605	0.20	-1.9
5,089,497	+		PFLU_RS22605	0.20	+0.3
5,089,497	+		PFLU_RS22605	0.20	+3.6
5,089,497	+		PFLU_RS22605	0.20	+1.8
5,089,497	+		PFLU_RS22605	0.20	-0.3
5,089,497	+		PFLU_RS22605	0.20	+1.3
5,089,497	+		PFLU_RS22605	0.20	-2.0
5,089,497	+		PFLU_RS22605	0.20	+1.0
5,089,497	+		PFLU_RS22605	0.20	+0.3
5,089,497	+		PFLU_RS22605	0.20	+0.3
5,089,497	+		PFLU_RS22605	0.20	-0.4
5,089,497	+		PFLU_RS22605	0.20	-0.9
5,089,497	+		PFLU_RS22605	0.20	-0.0
5,089,498	-		PFLU_RS22605	0.20	-0.7
5,089,498	-		PFLU_RS22605	0.20	-1.4
5,089,498	-		PFLU_RS22605	0.20	-2.4
5,089,498	-		PFLU_RS22605	0.20	-3.2
5,089,498	-		PFLU_RS22605	0.20	-3.0
5,089,498	-		PFLU_RS22605	0.20	-2.7
5,089,498	-		PFLU_RS22605	0.20	-3.6
5,089,498	-		PFLU_RS22605	0.20	-0.7
5,089,645	+		PFLU_RS22605	0.38	-0.7
5,089,645	+		PFLU_RS22605	0.38	+0.5
5,089,645	+		PFLU_RS22605	0.38	+0.6
5,089,645	+		PFLU_RS22605	0.38	-0.0
5,089,646	-		PFLU_RS22605	0.38	-1.9
5,089,646	-		PFLU_RS22605	0.38	-1.1
5,089,695	+		PFLU_RS22605	0.44	-0.6
5,089,696	-		PFLU_RS22605	0.44	-0.7
5,089,772	+		PFLU_RS22605	0.53	+0.7
5,089,773	-		PFLU_RS22605	0.53	-1.4
5,089,803	+		PFLU_RS22605	0.57	+0.8
5,089,803	+		PFLU_RS22605	0.57	+0.3
5,089,803	+		PFLU_RS22605	0.57	+1.9
5,089,803	+		PFLU_RS22605	0.57	-0.3
5,089,804	-		PFLU_RS22605	0.57	-3.0
5,089,825	+		PFLU_RS22605	0.60	+1.7
5,089,825	+		PFLU_RS22605	0.60	+0.7
5,089,825	+		PFLU_RS22605	0.60	+0.3
5,089,826	-		PFLU_RS22605	0.60	-0.9
5,089,893	+		PFLU_RS22605	0.68	+1.0
5,089,925	+		PFLU_RS22605	0.72	+0.1
5,089,926	-		PFLU_RS22605	0.72	-1.2
5,089,949	+		PFLU_RS22605	0.75	-0.4
5,089,949	+		PFLU_RS22605	0.75	+0.2
5,089,949	+		PFLU_RS22605	0.75	+1.7
5,089,949	+		PFLU_RS22605	0.75	+0.7
5,089,949	+		PFLU_RS22605	0.75	+0.1
5,089,949	+		PFLU_RS22605	0.75	-1.3
5,089,950	-		PFLU_RS22605	0.75	-1.8
5,089,950	-		PFLU_RS22605	0.75	-2.3
5,089,950	-		PFLU_RS22605	0.75	-3.3
5,090,158	+				+1.3
5,090,172	+				+0.3
5,090,172	+				+1.1
5,090,173	-				+0.4
5,090,173	-				-2.7
5,090,196	+		PFLU_RS22610	0.14	+0.4
5,090,196	+		PFLU_RS22610	0.14	+1.4
5,090,196	+		PFLU_RS22610	0.14	+0.7
5,090,197	-		PFLU_RS22610	0.15	-1.0
5,090,197	-		PFLU_RS22610	0.15	-0.7
5,090,197	-		PFLU_RS22610	0.15	+0.7
5,090,197	-		PFLU_RS22610	0.15	+0.2
5,090,215	+		PFLU_RS22610	0.22	-2.8
5,090,215	+		PFLU_RS22610	0.22	-1.2
5,090,215	+		PFLU_RS22610	0.22	-0.6
5,090,215	+		PFLU_RS22610	0.22	+2.3
5,090,215	+		PFLU_RS22610	0.22	+1.3
5,090,216	-		PFLU_RS22610	0.22	-0.5
5,090,216	-		PFLU_RS22610	0.22	-2.1