Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21580

Experiment: L-tyrosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (C) 10 mM
4,865,612	-				-0.8
4,865,634	+				+1.9
4,865,634	+				+0.3
4,865,668	-				+0.4
4,865,956	+		PFLU_RS21570	0.56	+0.1
4,865,956	+		PFLU_RS21570	0.56	-0.4
4,865,956	+		PFLU_RS21570	0.56	-0.4
4,865,957	-		PFLU_RS21570	0.57	-1.4
4,865,957	-		PFLU_RS21570	0.57	+1.9
4,865,957	-		PFLU_RS21570	0.57	+0.8
4,866,191	-				-1.7
4,866,215	+				-0.9
4,866,216	-				+0.6
4,866,216	-				+2.8
4,866,216	-				+0.0
4,866,261	+				+0.5
4,866,261	+				+0.2
4,866,261	+				-0.8
4,866,274	+				-0.1
4,866,275	-				+0.4
4,866,338	+		PFLU_RS21575	0.29	-1.5
4,866,338	+		PFLU_RS21575	0.29	+0.1
4,866,339	-		PFLU_RS21575	0.29	+0.7
4,866,517	+				+0.3
4,866,517	+				-0.2
4,866,517	+				+0.1
4,866,518	-				-0.7
4,866,518	-				+0.3
4,866,518	-				-1.2
4,866,518	-				+2.2
4,866,518	-				-0.9
4,866,592	+				+0.4
4,866,608	+				+0.5
4,866,608	+				-0.5
4,866,608	+				+0.2
4,866,608	+				+0.9
4,866,608	+				-0.3
4,866,609	-				-0.6
4,866,705	-		PFLU_RS21580	0.12	-0.1
4,866,771	+		PFLU_RS21580	0.20	-0.5
4,866,771	+		PFLU_RS21580	0.20	-2.1
4,867,190	+		PFLU_RS21580	0.72	-0.7
4,867,335	+				+1.8
4,867,335	+				+1.2
4,867,335	+				+0.3
4,867,358	-				+0.1
4,867,358	-				-2.1
4,867,358	-				-0.8
4,867,358	-				+0.3
4,867,391	+				+0.3
4,867,391	+				-0.2
4,867,391	+				-1.2
4,867,391	+				-2.1
4,867,391	+				-0.4
4,867,391	+				+0.7
4,867,391	+				-1.4
4,867,391	+				-0.3
4,867,392	-				-0.9
4,867,392	-				-1.0
4,867,392	-				+0.0
4,867,392	-				+0.6
4,867,392	-				+0.2
4,867,435	+				-0.4
4,867,435	+				+1.2
4,867,435	+				-0.3
4,867,447	+				-0.3
4,867,447	+				-0.3
4,867,447	+				-0.6
4,867,447	+				+0.2
4,867,447	+				-0.8
4,867,447	+				-0.4
4,867,447	+				+0.5
4,867,447	+				-1.4
4,867,447	+				-0.1
4,867,447	+				-0.3
4,867,447	+				-1.4
4,867,447	+				+1.7
4,867,447	+				-0.1
4,867,447	+				-1.6
4,867,447	+				-1.3
4,867,447	+				+1.2
4,867,447	+				+0.5
4,867,447	+				-0.6
4,867,447	+				-0.5
4,867,447	+				-0.5
4,867,447	+				-0.4
4,867,447	+				-1.2
4,867,447	+				-1.6
4,867,447	+				-1.6
4,867,447	+				-0.5
4,867,448	-				+1.2
4,867,448	-				+0.6
4,867,448	-				+0.2
4,867,448	-				+0.4
4,867,448	-				-0.1
4,867,448	-				-0.4
4,867,448	-				+0.3
4,867,448	-				-0.3
4,867,449	+				-0.0
4,867,450	-				-0.2
4,867,450	-				-0.4
4,867,460	+				-1.3
4,867,460	+				-0.8
4,867,460	+				+0.2
4,867,460	+				-1.0
4,867,460	+				-0.1
4,867,460	+				-0.4
4,867,460	+				-0.1
4,867,460	+				-0.2
4,867,461	-				-0.2
4,867,461	-				+0.8
4,867,461	-				+0.4
4,867,461	-				-1.2
4,867,504	+				+0.3
4,867,504	+				+1.1
4,867,504	+				-0.1
4,867,504	+				-1.4
4,867,504	+				+0.2
4,867,504	+				+0.6
4,867,504	+				+0.2
4,867,504	+				+0.8
4,867,504	+				-2.5
4,867,504	+				-0.8
4,867,504	+				-0.5
4,867,504	+				+0.1
4,867,504	+				-0.2
4,867,504	+				-0.1
4,867,504	+				-0.4
4,867,504	+				-0.8
4,867,505	-				+0.2
4,867,505	-				+1.0
4,867,505	-				-0.3
4,867,505	-				-0.6
4,867,505	-				-1.1
4,867,505	-				+1.2
4,867,505	-				-0.3
4,867,613	+		PFLU_RS21585	0.16	+0.5
4,867,613	+		PFLU_RS21585	0.16	-1.1
4,867,613	+		PFLU_RS21585	0.16	-2.3
4,867,613	+		PFLU_RS21585	0.16	-0.0
4,867,614	-		PFLU_RS21585	0.16	-0.1
4,867,614	-		PFLU_RS21585	0.16	+1.6
4,867,614	-		PFLU_RS21585	0.16	+0.8
4,867,752	+		PFLU_RS21585	0.31	-0.7
4,867,752	+		PFLU_RS21585	0.31	+0.1
4,867,752	+		PFLU_RS21585	0.31	+0.4
4,867,752	+		PFLU_RS21585	0.31	+0.3
4,867,752	+		PFLU_RS21585	0.31	+0.4
4,867,752	+		PFLU_RS21585	0.31	+1.1
4,867,752	+		PFLU_RS21585	0.31	-0.5
4,867,753	-		PFLU_RS21585	0.31	-0.3
4,867,753	-		PFLU_RS21585	0.31	-0.2
4,867,753	-		PFLU_RS21585	0.31	-0.4
4,867,753	-		PFLU_RS21585	0.31	-1.3
4,867,753	-		PFLU_RS21585	0.31	+0.6
4,867,782	+		PFLU_RS21585	0.34	+1.2
4,867,782	+		PFLU_RS21585	0.34	+1.9
4,867,783	-		PFLU_RS21585	0.34	-0.2
4,867,925	+		PFLU_RS21585	0.49	-0.1
4,867,925	+		PFLU_RS21585	0.49	-0.8
4,867,925	+		PFLU_RS21585	0.49	+0.1
4,867,925	+		PFLU_RS21585	0.49	-1.1
4,867,925	+		PFLU_RS21585	0.49	+1.3
4,867,926	-		PFLU_RS21585	0.49	-2.1
4,867,926	-		PFLU_RS21585	0.49	-0.6
4,867,926	-		PFLU_RS21585	0.49	-0.8
4,868,006	+		PFLU_RS21585	0.58	-0.1
4,868,006	+		PFLU_RS21585	0.58	-1.4
4,868,006	+		PFLU_RS21585	0.58	+0.0
4,868,006	+		PFLU_RS21585	0.58	-0.3
4,868,006	+		PFLU_RS21585	0.58	+0.1
4,868,006	+		PFLU_RS21585	0.58	-0.6
4,868,006	+		PFLU_RS21585	0.58	+0.9
4,868,007	-		PFLU_RS21585	0.58	-0.5
4,868,007	-		PFLU_RS21585	0.58	+1.0
4,868,007	-		PFLU_RS21585	0.58	+1.0
4,868,007	-		PFLU_RS21585	0.58	+1.8
4,868,007	-		PFLU_RS21585	0.58	-0.2
4,868,110	-		PFLU_RS21585	0.69	-0.7
4,868,111	+		PFLU_RS21585	0.69	+0.4
4,868,111	+		PFLU_RS21585	0.69	+0.7
4,868,111	+		PFLU_RS21585	0.69	-0.6
4,868,111	+		PFLU_RS21585	0.69	+0.1
4,868,112	-		PFLU_RS21585	0.69	-0.3
4,868,112	-		PFLU_RS21585	0.69	+0.1
4,868,377	+				+0.3
4,868,377	+				-0.4
4,868,377	+				+0.3
4,868,377	+				-0.6
4,868,377	+				-0.8
4,868,377	+				-0.1
4,868,377	+				+0.0
4,868,378	-				+0.5
4,868,378	-				+0.7
4,868,378	-				-0.2
4,868,402	-				-1.8