Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06730

Experiment: L-tyrosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (C) 10 mM
1,503,482	+				-0.4
1,503,482	+				-1.0
1,503,482	+				-2.3
1,503,482	+				+0.4
1,503,483	-				-0.9
1,503,483	-				-0.8
1,503,485	+				-1.0
1,503,485	+				-1.5
1,503,485	+				+1.3
1,503,485	+				-0.0
1,503,485	+				-0.0
1,503,485	+				-0.7
1,503,485	+				-0.9
1,503,485	+				+1.3
1,503,485	+				-1.7
1,503,486	-				-0.3
1,503,486	-				-1.1
1,503,486	-				-0.2
1,503,486	-				+0.6
1,503,489	+				-1.4
1,503,489	+				+3.3
1,503,489	+				-0.0
1,503,490	-				+0.1
1,503,490	-				+1.0
1,503,490	-				-1.3
1,503,490	-				-1.1
1,503,490	-				+0.1
1,503,558	+				-1.2
1,503,558	+				+1.0
1,503,558	+				-0.3
1,503,558	+				-1.7
1,503,558	+				-2.7
1,503,559	-				-0.6
1,503,559	-				-2.0
1,503,701	-				-2.1
1,503,772	+		PFLU_RS06725	0.17	-0.9
1,503,772	+		PFLU_RS06725	0.17	+0.1
1,503,773	-		PFLU_RS06725	0.17	+0.8
1,503,791	+		PFLU_RS06725	0.20	+0.3
1,503,791	+		PFLU_RS06725	0.20	-1.6
1,503,792	-		PFLU_RS06725	0.20	-0.3
1,503,792	-		PFLU_RS06725	0.20	-1.3
1,503,792	-		PFLU_RS06725	0.20	-1.4
1,503,953	+		PFLU_RS06725	0.38	-1.7
1,503,954	-		PFLU_RS06725	0.39	+0.5
1,503,954	-		PFLU_RS06725	0.39	-0.2
1,503,954	-		PFLU_RS06725	0.39	+0.3
1,503,954	-		PFLU_RS06725	0.39	-2.1
1,503,999	-		PFLU_RS06725	0.44	-0.5
1,503,999	-		PFLU_RS06725	0.44	-2.5
1,504,138	+		PFLU_RS06725	0.60	-1.0
1,504,138	+		PFLU_RS06725	0.60	-1.5
1,504,138	+		PFLU_RS06725	0.60	+0.6
1,504,139	-		PFLU_RS06725	0.60	-2.7
1,504,139	-		PFLU_RS06725	0.60	+0.1
1,504,139	-		PFLU_RS06725	0.60	-0.7
1,504,293	+		PFLU_RS06725	0.78	-1.8
1,504,293	+		PFLU_RS06725	0.78	+0.2
1,504,294	-		PFLU_RS06725	0.78	-0.5
1,504,294	-		PFLU_RS06725	0.78	-0.2
1,504,316	+		PFLU_RS06725	0.81	-3.3
1,504,328	+		PFLU_RS06725	0.82	-1.5
1,504,328	+		PFLU_RS06725	0.82	+1.7
1,504,328	+		PFLU_RS06725	0.82	-3.2
1,504,328	+		PFLU_RS06725	0.82	-0.5
1,504,330	+		PFLU_RS06725	0.82	+0.3
1,504,330	+		PFLU_RS06725	0.82	+0.1
1,504,352	+		PFLU_RS06725	0.85	-2.7
1,504,352	+		PFLU_RS06725	0.85	-2.7
1,504,352	+		PFLU_RS06725	0.85	-1.2
1,504,352	+		PFLU_RS06725	0.85	+0.7
1,504,352	+		PFLU_RS06725	0.85	+0.3
1,504,352	+		PFLU_RS06725	0.85	-1.5
1,504,352	+		PFLU_RS06725	0.85	-1.3
1,504,352	+		PFLU_RS06725	0.85	-2.3
1,504,352	+		PFLU_RS06725	0.85	-0.8
1,504,353	-		PFLU_RS06725	0.85	-1.6
1,504,353	-		PFLU_RS06725	0.85	-0.8
1,504,353	-		PFLU_RS06725	0.85	-1.2
1,504,353	-		PFLU_RS06725	0.85	-0.3
1,504,412	+				-1.0
1,504,412	+				-0.7
1,504,412	+				-1.9
1,504,412	+				-0.0
1,504,412	+				+0.1
1,504,412	+				-0.7
1,504,412	+				-0.1
1,504,412	+				-0.0
1,504,412	+				+1.0
1,504,412	+				+0.1
1,504,412	+				+0.3
1,504,412	+				+1.5
1,504,412	+				+0.1
1,504,412	+				-0.1
1,504,412	+				+0.9
1,504,412	+				-1.0
1,504,412	+				-0.1
1,504,412	+				-1.6
1,504,412	+				-0.6
1,504,412	+				-1.0
1,504,412	+				-1.4
1,504,412	+				+0.9
1,504,412	+				-0.7
1,504,412	+				-0.9
1,504,413	-				-0.0
1,504,413	-				-1.7
1,504,413	-				-2.4
1,504,413	-				+0.4
1,504,413	-				-0.6
1,504,413	-				+1.1
1,504,413	-				+0.2
1,504,413	-				-0.6
1,504,413	-				-0.3
1,504,413	-				-0.7
1,504,413	-				-1.5
1,504,413	-				-0.0
1,504,413	-				-1.1
1,504,413	-				-0.5
1,504,413	-				-1.3
1,504,413	-				-0.7
1,504,413	-				-1.4
1,504,413	-				-0.5
1,504,413	-				-1.5
1,504,413	-				-1.7
1,504,413	-				-0.2
1,504,413	-				-1.2
1,504,413	-				+0.4
1,504,413	-				-1.2
1,504,413	-				-2.0
1,504,413	-				-2.5
1,504,413	-				+1.3
1,504,487	-				+1.9
1,504,617	-		PFLU_RS06730	0.18	-0.7
1,504,617	-		PFLU_RS06730	0.18	-0.2
1,504,624	+		PFLU_RS06730	0.18	-1.1
1,504,624	+		PFLU_RS06730	0.18	-2.1
1,504,624	+		PFLU_RS06730	0.18	-2.0
1,504,624	+		PFLU_RS06730	0.18	+1.0
1,504,624	+		PFLU_RS06730	0.18	-0.5
1,504,624	+		PFLU_RS06730	0.18	-1.7
1,504,624	+		PFLU_RS06730	0.18	-2.0
1,504,624	+		PFLU_RS06730	0.18	-2.1
1,504,624	+		PFLU_RS06730	0.18	-1.1
1,504,624	+		PFLU_RS06730	0.18	-3.1
1,504,624	+		PFLU_RS06730	0.18	-0.0
1,504,625	-		PFLU_RS06730	0.19	+0.5
1,504,625	-		PFLU_RS06730	0.19	+0.7
1,504,625	-		PFLU_RS06730	0.19	-1.7
1,504,625	-		PFLU_RS06730	0.19	-2.4
1,504,625	-		PFLU_RS06730	0.19	-1.2
1,504,625	-		PFLU_RS06730	0.19	-1.0
1,504,625	-		PFLU_RS06730	0.19	-0.1
1,504,625	-		PFLU_RS06730	0.19	-0.9
1,504,625	-		PFLU_RS06730	0.19	-1.2
1,504,625	-		PFLU_RS06730	0.19	-1.0
1,504,709	+		PFLU_RS06730	0.29	+3.6
1,504,710	-		PFLU_RS06730	0.29	-1.2
1,504,710	-		PFLU_RS06730	0.29	-1.4
1,504,710	-		PFLU_RS06730	0.29	-1.4
1,504,828	+		PFLU_RS06730	0.45	-2.0
1,504,828	+		PFLU_RS06730	0.45	-0.8
1,504,828	+		PFLU_RS06730	0.45	-1.8
1,504,828	+		PFLU_RS06730	0.45	-1.2
1,504,829	-		PFLU_RS06730	0.45	-0.7
1,504,829	-		PFLU_RS06730	0.45	+0.3
1,504,829	-		PFLU_RS06730	0.45	-1.0
1,504,829	-		PFLU_RS06730	0.45	-1.1
1,504,989	+		PFLU_RS06730	0.65	-0.3
1,504,989	+		PFLU_RS06730	0.65	-3.1
1,505,022	-		PFLU_RS06730	0.69	+0.1
1,505,022	-		PFLU_RS06730	0.69	-2.3
1,505,022	-		PFLU_RS06730	0.69	+1.7
1,505,028	+		PFLU_RS06730	0.70	-1.3
1,505,028	+		PFLU_RS06730	0.70	+0.5
1,505,028	+		PFLU_RS06730	0.70	-0.9
1,505,028	+		PFLU_RS06730	0.70	-2.0
1,505,028	+		PFLU_RS06730	0.70	-2.1
1,505,028	+		PFLU_RS06730	0.70	-1.5
1,505,029	-		PFLU_RS06730	0.70	-0.5
1,505,029	-		PFLU_RS06730	0.70	+0.3
1,505,029	-		PFLU_RS06730	0.70	-0.2
1,505,029	-		PFLU_RS06730	0.70	-1.5
1,505,031	+		PFLU_RS06730	0.71	-2.7
1,505,273	+				-3.0
1,505,273	+				+0.3
1,505,273	+				-1.0
1,505,273	+				-0.1
1,505,273	+				+1.3
1,505,273	+				-0.4
1,505,273	+				+0.7
1,505,274	-				-0.7
1,505,274	-				+0.2
1,505,274	-				-3.2
1,505,524	+		PFLU_RS06735	0.22	+0.2
1,505,524	+		PFLU_RS06735	0.22	+1.0
1,505,525	-		PFLU_RS06735	0.22	-0.7
1,505,525	-		PFLU_RS06735	0.22	+1.3
1,505,705	+		PFLU_RS06735	0.37	+0.3
1,505,706	-		PFLU_RS06735	0.37	-0.2
1,505,706	-		PFLU_RS06735	0.37	+0.8
1,505,706	-		PFLU_RS06735	0.37	-1.0
1,505,731	-		PFLU_RS06735	0.39	-1.3
1,505,778	+		PFLU_RS06735	0.43	-0.7
1,505,778	+		PFLU_RS06735	0.43	+0.3
1,505,778	+		PFLU_RS06735	0.43	-1.1
1,505,778	+		PFLU_RS06735	0.43	-1.8
1,505,778	+		PFLU_RS06735	0.43	+0.0
1,505,778	+		PFLU_RS06735	0.43	-1.3
1,505,778	+		PFLU_RS06735	0.43	-1.0
1,505,778	+		PFLU_RS06735	0.43	+0.3
1,505,779	-		PFLU_RS06735	0.43	+0.5
1,505,779	-		PFLU_RS06735	0.43	-1.1
1,505,779	-		PFLU_RS06735	0.43	+0.1
1,505,779	-		PFLU_RS06735	0.43	-0.1
1,505,779	-		PFLU_RS06735	0.43	-0.7
1,505,779	-		PFLU_RS06735	0.43	+1.2
1,505,875	+		PFLU_RS06735	0.51	-0.0
1,506,097	+		PFLU_RS06735	0.70	+0.1