Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04475

Experiment: L-tyrosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (C) 10 mM
1,002,935	-		PFLU_RS04470	0.26	-2.7
1,002,935	-		PFLU_RS04470	0.26	-3.1
1,002,935	-		PFLU_RS04470	0.26	-1.9
1,002,935	-		PFLU_RS04470	0.26	-1.6
1,002,997	+		PFLU_RS04470	0.31	+0.4
1,002,997	+		PFLU_RS04470	0.31	-0.9
1,002,997	+		PFLU_RS04470	0.31	-1.8
1,002,997	+		PFLU_RS04470	0.31	-2.1
1,002,997	+		PFLU_RS04470	0.31	-2.5
1,002,997	+		PFLU_RS04470	0.31	-2.2
1,002,997	+		PFLU_RS04470	0.31	-1.8
1,002,997	+		PFLU_RS04470	0.31	-3.5
1,002,997	+		PFLU_RS04470	0.31	-3.7
1,002,997	+		PFLU_RS04470	0.31	-1.8
1,002,998	-		PFLU_RS04470	0.31	-1.9
1,002,998	-		PFLU_RS04470	0.31	-1.9
1,002,998	-		PFLU_RS04470	0.31	-2.8
1,002,998	-		PFLU_RS04470	0.31	+1.4
1,002,998	-		PFLU_RS04470	0.31	-1.8
1,003,022	-		PFLU_RS04470	0.33	-3.1
1,003,201	+		PFLU_RS04470	0.46	-2.2
1,003,201	+		PFLU_RS04470	0.46	-1.2
1,003,202	-		PFLU_RS04470	0.46	-1.9
1,003,202	-		PFLU_RS04470	0.46	-1.5
1,003,202	-		PFLU_RS04470	0.46	-1.2
1,003,230	+		PFLU_RS04470	0.48	-0.6
1,003,255	+		PFLU_RS04470	0.50	-0.9
1,003,255	+		PFLU_RS04470	0.50	-1.6
1,003,255	+		PFLU_RS04470	0.50	-1.1
1,003,255	+		PFLU_RS04470	0.50	-1.7
1,003,255	+		PFLU_RS04470	0.50	-2.5
1,003,255	+		PFLU_RS04470	0.50	-1.6
1,003,255	+		PFLU_RS04470	0.50	-0.9
1,003,255	+		PFLU_RS04470	0.50	-1.9
1,003,255	+		PFLU_RS04470	0.50	-1.9
1,003,255	+		PFLU_RS04470	0.50	-2.1
1,003,255	+		PFLU_RS04470	0.50	-1.8
1,003,255	+		PFLU_RS04470	0.50	+0.8
1,003,255	+		PFLU_RS04470	0.50	-2.3
1,003,255	+		PFLU_RS04470	0.50	-2.9
1,003,255	+		PFLU_RS04470	0.50	-1.2
1,003,255	+		PFLU_RS04470	0.50	-1.8
1,003,255	+		PFLU_RS04470	0.50	-2.4
1,003,255	+		PFLU_RS04470	0.50	-0.9
1,003,255	+		PFLU_RS04470	0.50	+0.1
1,003,255	+		PFLU_RS04470	0.50	-3.5
1,003,255	+		PFLU_RS04470	0.50	-1.4
1,003,255	+		PFLU_RS04470	0.50	-1.8
1,003,256	-		PFLU_RS04470	0.50	-2.7
1,003,256	-		PFLU_RS04470	0.50	-3.0
1,003,256	-		PFLU_RS04470	0.50	-0.8
1,003,256	-		PFLU_RS04470	0.50	-2.5
1,003,256	-		PFLU_RS04470	0.50	-3.2
1,003,256	-		PFLU_RS04470	0.50	-0.2
1,003,256	-		PFLU_RS04470	0.50	-2.6
1,003,256	-		PFLU_RS04470	0.50	-2.1
1,003,256	-		PFLU_RS04470	0.50	-1.6
1,003,256	-		PFLU_RS04470	0.50	-2.4
1,003,256	-		PFLU_RS04470	0.50	-0.5
1,003,256	-		PFLU_RS04470	0.50	-2.4
1,003,256	-		PFLU_RS04470	0.50	+0.4
1,003,256	-		PFLU_RS04470	0.50	-2.3
1,003,256	-		PFLU_RS04470	0.50	-2.9
1,003,334	+		PFLU_RS04470	0.56	-0.2
1,003,335	-		PFLU_RS04470	0.56	-2.8
1,003,467	+		PFLU_RS04470	0.66	-0.9
1,003,467	+		PFLU_RS04470	0.66	-0.9
1,003,467	+		PFLU_RS04470	0.66	-2.1
1,003,467	+		PFLU_RS04470	0.66	-2.8
1,003,467	+		PFLU_RS04470	0.66	-1.4
1,003,468	-		PFLU_RS04470	0.66	-1.8
1,003,693	+		PFLU_RS04470	0.83	-0.6
1,003,693	+		PFLU_RS04470	0.83	-0.8
1,003,693	+		PFLU_RS04470	0.83	-0.5
1,003,694	-		PFLU_RS04470	0.83	-0.9
1,003,694	-		PFLU_RS04470	0.83	+1.4
1,003,694	-		PFLU_RS04470	0.83	-2.1
1,003,762	+		PFLU_RS04470	0.88	-0.6
1,003,762	+		PFLU_RS04470	0.88	-1.1
1,003,762	+		PFLU_RS04470	0.88	-0.4
1,003,762	+		PFLU_RS04470	0.88	-0.6
1,003,762	+		PFLU_RS04470	0.88	-2.1
1,003,762	+		PFLU_RS04470	0.88	-0.2
1,003,762	+		PFLU_RS04470	0.88	-2.4
1,003,763	-		PFLU_RS04470	0.89	-1.9
1,003,763	-		PFLU_RS04470	0.89	+0.4
1,003,763	-		PFLU_RS04470	0.89	+0.1
1,003,763	-		PFLU_RS04470	0.89	-2.5
1,003,763	-		PFLU_RS04470	0.89	-2.2
1,003,763	-		PFLU_RS04470	0.89	-3.3
1,003,763	-		PFLU_RS04470	0.89	-2.7
1,003,886	-				-1.2
1,003,886	-				-2.3
1,003,924	-				-1.1
1,003,960	+				-2.3
1,003,960	+				-0.9
1,003,960	+				-1.5
1,003,960	+				+0.6
1,003,960	+				-1.1
1,003,960	+				-0.4
1,003,960	+				-0.6
1,003,960	+				-0.5
1,003,960	+				-1.1
1,003,960	+				-0.4
1,003,960	+				-0.8
1,003,961	-				-0.9
1,003,961	-				+1.4
1,003,961	-				-1.6
1,003,961	-				-3.4
1,003,961	-				-1.3
1,003,961	-				+0.7
1,003,961	-				+0.4
1,003,961	-				-1.0
1,003,961	-				-1.3
1,003,961	-				-1.2
1,003,961	-				-0.7
1,003,961	-				-0.6
1,003,961	-				+0.6
1,003,961	-				-0.4
1,003,961	-				-1.9
1,003,965	-				+0.2
1,004,131	+		PFLU_RS04475	0.20	-2.7
1,004,131	+		PFLU_RS04475	0.20	-2.5
1,004,131	+		PFLU_RS04475	0.20	-1.2
1,004,131	+		PFLU_RS04475	0.20	-1.1
1,004,131	+		PFLU_RS04475	0.20	-3.0
1,004,131	+		PFLU_RS04475	0.20	-2.0
1,004,131	+		PFLU_RS04475	0.20	-0.1
1,004,131	+		PFLU_RS04475	0.20	-0.9
1,004,131	+		PFLU_RS04475	0.20	+1.4
1,004,132	-		PFLU_RS04475	0.20	-0.5
1,004,132	-		PFLU_RS04475	0.20	-0.1
1,004,132	-		PFLU_RS04475	0.20	-0.6
1,004,132	-		PFLU_RS04475	0.20	-1.1
1,004,132	-		PFLU_RS04475	0.20	-0.3
1,004,132	-		PFLU_RS04475	0.20	-1.0
1,004,132	-		PFLU_RS04475	0.20	-0.0
1,004,132	-		PFLU_RS04475	0.20	-1.7
1,004,132	-		PFLU_RS04475	0.20	-1.5
1,004,132	-		PFLU_RS04475	0.20	-1.1
1,004,132	-		PFLU_RS04475	0.20	-2.2
1,004,132	-		PFLU_RS04475	0.20	+0.4
1,004,135	-		PFLU_RS04475	0.21	+1.4
1,004,248	+		PFLU_RS04475	0.31	-0.9
1,004,248	+		PFLU_RS04475	0.31	-0.3
1,004,248	+		PFLU_RS04475	0.31	+0.5
1,004,249	-		PFLU_RS04475	0.31	+0.6
1,004,278	+		PFLU_RS04475	0.34	-2.3
1,004,278	+		PFLU_RS04475	0.34	+0.7
1,004,278	+		PFLU_RS04475	0.34	-1.2
1,004,278	+		PFLU_RS04475	0.34	-1.3
1,004,338	+		PFLU_RS04475	0.40	-0.9
1,004,338	+		PFLU_RS04475	0.40	+0.9
1,004,339	-		PFLU_RS04475	0.40	-0.2
1,004,339	-		PFLU_RS04475	0.40	-3.3
1,004,339	-		PFLU_RS04475	0.40	-0.4
1,004,467	+		PFLU_RS04475	0.52	-0.8
1,004,467	+		PFLU_RS04475	0.52	-1.9
1,004,467	+		PFLU_RS04475	0.52	+3.0
1,004,467	+		PFLU_RS04475	0.52	-1.8
1,004,467	+		PFLU_RS04475	0.52	-1.9
1,004,467	+		PFLU_RS04475	0.52	-0.6
1,004,467	+		PFLU_RS04475	0.52	-1.2
1,004,467	+		PFLU_RS04475	0.52	-0.5
1,004,467	+		PFLU_RS04475	0.52	-1.6
1,004,467	+		PFLU_RS04475	0.52	-2.0
1,004,467	+		PFLU_RS04475	0.52	-2.5
1,004,467	+		PFLU_RS04475	0.52	+0.4
1,004,467	+		PFLU_RS04475	0.52	-0.5
1,004,467	+		PFLU_RS04475	0.52	-1.0
1,004,467	+		PFLU_RS04475	0.52	-1.4
1,004,467	+		PFLU_RS04475	0.52	-1.5
1,004,467	+		PFLU_RS04475	0.52	-1.2
1,004,467	+		PFLU_RS04475	0.52	-0.6
1,004,467	+		PFLU_RS04475	0.52	+0.9
1,004,468	-		PFLU_RS04475	0.52	-0.7
1,004,468	-		PFLU_RS04475	0.52	-1.2
1,004,468	-		PFLU_RS04475	0.52	-0.4
1,004,468	-		PFLU_RS04475	0.52	-2.4
1,004,468	-		PFLU_RS04475	0.52	+0.0
1,004,468	-		PFLU_RS04475	0.52	+0.1
1,004,468	-		PFLU_RS04475	0.52	-0.8
1,004,468	-		PFLU_RS04475	0.52	-1.2
1,004,468	-		PFLU_RS04475	0.52	-0.1
1,004,468	-		PFLU_RS04475	0.52	-1.3
1,004,468	-		PFLU_RS04475	0.52	-2.1
1,004,468	-		PFLU_RS04475	0.52	-0.0
1,004,504	+		PFLU_RS04475	0.56	-0.5
1,004,504	+		PFLU_RS04475	0.56	-1.0
1,004,505	-		PFLU_RS04475	0.56	+1.4
1,004,641	+		PFLU_RS04475	0.69	-0.7
1,004,698	+		PFLU_RS04475	0.74	-1.4
1,004,698	+		PFLU_RS04475	0.74	-0.8
1,004,699	-		PFLU_RS04475	0.74	-1.8
1,004,870	+				-1.2
1,004,870	+				-1.5
1,004,968	+				-0.9
1,004,968	+				-0.1
1,004,968	+				+0.2
1,004,968	+				+1.1
1,004,969	-				+0.6
1,004,969	-				+0.2
1,004,969	-				+0.7
1,005,033	+				+1.4
1,005,033	+				+4.1
1,005,033	+				+0.9
1,005,034	-				+0.8
1,005,034	-				-0.3
1,005,040	+				-0.6
1,005,040	+				-0.3
1,005,041	-				+0.4
1,005,041	-				+0.4
1,005,041	-				+0.2
1,005,041	-				+0.2
1,005,041	-				-0.6
1,005,041	-				+0.5
1,005,041	-				+1.3
1,005,041	-				+0.7
1,005,041	-				-0.6
1,005,041	-				-1.1
1,005,041	-				+0.6
1,005,360	-		PFLU_RS04480	0.25	-0.0
1,005,418	+		PFLU_RS04480	0.30	+1.1
1,005,418	+		PFLU_RS04480	0.30	-0.1
1,005,418	+		PFLU_RS04480	0.30	+0.4
1,005,418	+		PFLU_RS04480	0.30	+1.2
1,005,418	+		PFLU_RS04480	0.30	-0.4
1,005,418	+		PFLU_RS04480	0.30	-0.6
1,005,418	+		PFLU_RS04480	0.30	-0.1
1,005,419	-		PFLU_RS04480	0.30	+1.4
1,005,419	-		PFLU_RS04480	0.30	+1.0
1,005,419	-		PFLU_RS04480	0.30	-0.5
1,005,419	-		PFLU_RS04480	0.30	-0.6
1,005,419	-		PFLU_RS04480	0.30	-1.3
1,005,419	-		PFLU_RS04480	0.30	-2.4
1,005,419	-		PFLU_RS04480	0.30	+1.7
1,005,419	-		PFLU_RS04480	0.30	+0.2
1,005,419	-		PFLU_RS04480	0.30	+0.7
1,005,419	-		PFLU_RS04480	0.30	+1.4
1,005,419	-		PFLU_RS04480	0.30	-1.3
1,005,419	-		PFLU_RS04480	0.30	+1.1
1,005,419	-		PFLU_RS04480	0.30	+0.0
1,005,419	-		PFLU_RS04480	0.30	-1.0
1,005,419	-		PFLU_RS04480	0.30	-1.5
1,005,419	-		PFLU_RS04480	0.30	-0.6
1,005,457	+		PFLU_RS04480	0.33	+1.1
1,005,457	+		PFLU_RS04480	0.33	-0.6
1,005,457	+		PFLU_RS04480	0.33	+0.4
1,005,457	+		PFLU_RS04480	0.33	-0.7
1,005,457	+		PFLU_RS04480	0.33	+2.8
1,005,458	-		PFLU_RS04480	0.33	-0.4
1,005,458	-		PFLU_RS04480	0.33	-0.1
1,005,458	-		PFLU_RS04480	0.33	-1.3
1,005,458	-		PFLU_RS04480	0.33	-0.6
1,005,458	-		PFLU_RS04480	0.33	+0.7
1,005,524	+		PFLU_RS04480	0.38	-0.2
1,005,524	+		PFLU_RS04480	0.38	-0.4
1,005,524	+		PFLU_RS04480	0.38	-1.2
1,005,524	+		PFLU_RS04480	0.38	+0.1
1,005,524	+		PFLU_RS04480	0.38	-1.9
1,005,524	+		PFLU_RS04480	0.38	+0.4
1,005,525	-		PFLU_RS04480	0.38	-0.0
1,005,525	-		PFLU_RS04480	0.38	+1.1
1,005,525	-		PFLU_RS04480	0.38	-0.6
1,005,525	-		PFLU_RS04480	0.38	-0.1
1,005,525	-		PFLU_RS04480	0.38	-0.8
1,005,525	-		PFLU_RS04480	0.38	-1.1
1,005,550	+		PFLU_RS04480	0.40	+0.4
1,005,551	-		PFLU_RS04480	0.40	-0.0
1,005,593	+		PFLU_RS04480	0.43	+0.9
1,005,593	+		PFLU_RS04480	0.43	-1.3
1,005,594	-		PFLU_RS04480	0.44	+0.3
1,005,594	-		PFLU_RS04480	0.44	-0.2
1,005,625	-		PFLU_RS04480	0.46	+0.8
1,005,727	+		PFLU_RS04480	0.54	-3.3
1,005,727	+		PFLU_RS04480	0.54	+0.4
1,005,728	-		PFLU_RS04480	0.54	+0.3
1,005,728	-		PFLU_RS04480	0.54	+0.7
1,005,728	-		PFLU_RS04480	0.54	-1.3
1,005,728	-		PFLU_RS04480	0.54	+0.7
1,005,728	-		PFLU_RS04480	0.54	+0.1
1,005,785	+		PFLU_RS04480	0.59	+0.7
1,005,785	+		PFLU_RS04480	0.59	-0.1
1,005,786	-		PFLU_RS04480	0.59	-0.0
1,005,786	-		PFLU_RS04480	0.59	+1.2
1,005,786	-		PFLU_RS04480	0.59	+1.2
1,005,856	+		PFLU_RS04480	0.64	-2.3
1,005,857	-		PFLU_RS04480	0.64	+0.7
1,005,887	+		PFLU_RS04480	0.67	-0.2
1,005,888	-		PFLU_RS04480	0.67	-0.2
1,005,888	-		PFLU_RS04480	0.67	+1.3