Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26785

Experiment: L-tyrosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (C) 10 mM
5,981,500	+		PFLU_RS26775	0.82	+0.0
5,981,500	+		PFLU_RS26775	0.82	+0.5
5,981,501	-		PFLU_RS26775	0.82	+2.3
5,981,522	+		PFLU_RS26775	0.85	+0.5
5,981,522	+		PFLU_RS26775	0.85	-0.6
5,981,522	+		PFLU_RS26775	0.85	+0.1
5,981,523	-		PFLU_RS26775	0.85	-0.1
5,981,548	+		PFLU_RS26775	0.88	+2.6
5,981,548	+		PFLU_RS26775	0.88	-0.5
5,981,548	+		PFLU_RS26775	0.88	-1.4
5,981,548	+		PFLU_RS26775	0.88	-0.4
5,981,549	-		PFLU_RS26775	0.88	-0.9
5,981,549	-		PFLU_RS26775	0.88	+0.2
5,981,549	-		PFLU_RS26775	0.88	-0.7
5,981,549	-		PFLU_RS26775	0.88	+0.4
5,981,549	-		PFLU_RS26775	0.88	-0.3
5,981,570	-				+0.7
5,981,596	-				+0.6
5,981,647	+				+1.3
5,981,647	+				+0.8
5,981,647	+				+0.0
5,981,647	+				+2.9
5,981,648	-				-0.3
5,981,648	-				+0.6
5,981,648	-				-0.4
5,981,648	-				+1.6
5,981,648	-				-0.4
5,981,648	-				-0.4
5,981,686	+				+0.3
5,981,686	+				-1.1
5,981,686	+				+0.3
5,981,686	+				-1.1
5,981,735	+				+0.6
5,982,269	+				-1.1
5,982,269	+				-2.8
5,982,384	-				+1.0
5,982,405	+				-0.7
5,982,413	+				-0.3
5,982,413	+				+1.0
5,982,419	+				+0.6
5,982,419	+				+0.3
5,982,420	-				-1.3
5,982,420	-				-0.9
5,982,420	-				-0.3
5,982,420	-				-0.3
5,982,420	-				+0.8
5,982,420	-				+0.8
5,982,431	+				-0.8
5,982,431	+				-0.4
5,982,432	-				-0.1
5,982,457	-				+0.4
5,982,494	-				-0.3
5,982,499	+				-1.3
5,982,499	+				-0.9
5,982,499	+				-0.1
5,982,500	-				+2.3
5,982,500	-				+0.5
5,982,500	-				+0.3
5,982,500	-				+0.4
5,982,615	+		PFLU_RS26785	0.16	+1.0
5,982,615	+		PFLU_RS26785	0.16	+1.3
5,982,615	+		PFLU_RS26785	0.16	+0.0
5,982,615	+		PFLU_RS26785	0.16	+0.2
5,982,615	+		PFLU_RS26785	0.16	+0.9
5,982,615	+		PFLU_RS26785	0.16	+0.2
5,982,615	+		PFLU_RS26785	0.16	-0.5
5,982,616	-		PFLU_RS26785	0.16	-0.7
5,982,616	-		PFLU_RS26785	0.16	+0.7
5,982,773	+		PFLU_RS26785	0.36	+0.1
5,982,773	+		PFLU_RS26785	0.36	+0.5
5,982,773	+		PFLU_RS26785	0.36	-0.8
5,982,773	+		PFLU_RS26785	0.36	+1.3
5,982,773	+		PFLU_RS26785	0.36	+0.3
5,982,773	+		PFLU_RS26785	0.36	+0.4
5,982,773	+		PFLU_RS26785	0.36	+0.6
5,982,774	-		PFLU_RS26785	0.36	-0.2
5,982,774	-		PFLU_RS26785	0.36	+0.1
5,982,774	-		PFLU_RS26785	0.36	+0.4
5,982,890	+		PFLU_RS26785	0.51	-0.3
5,982,892	-		PFLU_RS26785	0.51	+1.0
5,982,917	+		PFLU_RS26785	0.54	+0.1
5,982,917	+		PFLU_RS26785	0.54	+1.5
5,982,917	+		PFLU_RS26785	0.54	+1.1
5,982,917	+		PFLU_RS26785	0.54	+1.4
5,982,917	+		PFLU_RS26785	0.54	-0.5
5,982,917	+		PFLU_RS26785	0.54	+1.3
5,982,917	+		PFLU_RS26785	0.54	-0.3
5,982,917	+		PFLU_RS26785	0.54	+1.3
5,982,917	+		PFLU_RS26785	0.54	+0.3
5,982,917	+		PFLU_RS26785	0.54	+0.8
5,982,917	+		PFLU_RS26785	0.54	-0.0
5,982,917	+		PFLU_RS26785	0.54	+0.4
5,982,918	-		PFLU_RS26785	0.55	+0.9
5,982,918	-		PFLU_RS26785	0.55	+0.3
5,982,918	-		PFLU_RS26785	0.55	+0.3
5,982,918	-		PFLU_RS26785	0.55	+0.2
5,982,918	-		PFLU_RS26785	0.55	+0.9
5,982,918	-		PFLU_RS26785	0.55	+1.2
5,982,918	-		PFLU_RS26785	0.55	-0.2
5,982,918	-		PFLU_RS26785	0.55	-0.7
5,982,918	-		PFLU_RS26785	0.55	+1.5
5,982,918	-		PFLU_RS26785	0.55	+0.5
5,982,918	-		PFLU_RS26785	0.55	+0.3
5,982,918	-		PFLU_RS26785	0.55	+0.6
5,982,918	-		PFLU_RS26785	0.55	+0.5
5,982,918	-		PFLU_RS26785	0.55	-1.1
5,982,918	-		PFLU_RS26785	0.55	-0.5
5,982,918	-		PFLU_RS26785	0.55	-0.0
5,982,918	-		PFLU_RS26785	0.55	+0.7
5,982,918	-		PFLU_RS26785	0.55	-0.5
5,982,918	-		PFLU_RS26785	0.55	-0.9
5,983,030	+		PFLU_RS26785	0.69	-0.9
5,983,030	+		PFLU_RS26785	0.69	-0.3
5,983,030	+		PFLU_RS26785	0.69	+1.0
5,983,030	+		PFLU_RS26785	0.69	-0.3
5,983,030	+		PFLU_RS26785	0.69	+0.2
5,983,030	+		PFLU_RS26785	0.69	+0.8
5,983,030	+		PFLU_RS26785	0.69	+1.1
5,983,030	+		PFLU_RS26785	0.69	+1.0
5,983,031	-		PFLU_RS26785	0.69	+0.3
5,983,031	-		PFLU_RS26785	0.69	-1.3
5,983,031	-		PFLU_RS26785	0.69	-0.4
5,983,031	-		PFLU_RS26785	0.69	+0.3
5,983,046	+		PFLU_RS26785	0.71	+2.3
5,983,046	+		PFLU_RS26785	0.71	+1.3
5,983,046	+		PFLU_RS26785	0.71	+0.5
5,983,046	+		PFLU_RS26785	0.71	+1.3
5,983,046	+		PFLU_RS26785	0.71	+0.3
5,983,046	+		PFLU_RS26785	0.71	+0.3
5,983,046	+		PFLU_RS26785	0.71	+0.8
5,983,046	+		PFLU_RS26785	0.71	-0.4
5,983,046	+		PFLU_RS26785	0.71	+1.3
5,983,047	-		PFLU_RS26785	0.71	-0.8
5,983,047	-		PFLU_RS26785	0.71	-0.6
5,983,047	-		PFLU_RS26785	0.71	+1.2
5,983,047	-		PFLU_RS26785	0.71	+0.7
5,983,047	-		PFLU_RS26785	0.71	+1.8
5,983,047	-		PFLU_RS26785	0.71	+1.1
5,983,047	-		PFLU_RS26785	0.71	-0.1
5,983,047	-		PFLU_RS26785	0.71	+1.7
5,983,052	+		PFLU_RS26785	0.72	+2.0
5,983,052	+		PFLU_RS26785	0.72	+1.3
5,983,052	+		PFLU_RS26785	0.72	+1.0
5,983,052	+		PFLU_RS26785	0.72	+0.3
5,983,052	+		PFLU_RS26785	0.72	-1.5
5,983,052	+		PFLU_RS26785	0.72	+0.1
5,983,052	+		PFLU_RS26785	0.72	+0.4
5,983,053	-		PFLU_RS26785	0.72	+0.3
5,983,053	-		PFLU_RS26785	0.72	-0.1
5,983,053	-		PFLU_RS26785	0.72	+0.3
5,983,115	+		PFLU_RS26785	0.80	+1.8
5,983,115	+		PFLU_RS26785	0.80	+0.3
5,983,115	+		PFLU_RS26785	0.80	+0.9
5,983,115	+		PFLU_RS26785	0.80	+0.6
5,983,116	-		PFLU_RS26785	0.80	+0.7
5,983,168	-		PFLU_RS26785	0.87	+0.6
5,983,168	-		PFLU_RS26785	0.87	-0.6
5,983,225	-				+0.7
5,983,225	-				+0.0
5,983,243	+				+0.8
5,983,243	+				+0.1
5,983,244	-				+0.1
5,983,244	-				+1.2
5,983,283	+				+0.5
5,983,284	-				+0.9
5,983,284	-				-1.5
5,983,286	+				+0.8
5,983,287	-				+0.7
5,983,287	-				-2.0
5,983,287	-				-3.8
5,983,287	-				+0.5
5,983,287	-				-0.2
5,983,367	+		PFLU_RS31150	0.44	-0.8
5,983,367	+		PFLU_RS31150	0.44	+0.6
5,983,368	-		PFLU_RS31150	0.44	+0.3
5,983,368	-		PFLU_RS31150	0.44	-1.0
5,983,370	+		PFLU_RS31150	0.45	-1.3
5,983,370	+		PFLU_RS31150	0.45	-1.3
5,983,370	+		PFLU_RS31150	0.45	-0.1
5,983,370	+		PFLU_RS31150	0.45	-0.0
5,983,370	+		PFLU_RS31150	0.45	-0.6
5,983,370	+		PFLU_RS31150	0.45	+1.0
5,983,370	+		PFLU_RS31150	0.45	+1.2
5,983,371	-		PFLU_RS31150	0.46	+0.7
5,983,371	-		PFLU_RS31150	0.46	-0.5
5,983,371	-		PFLU_RS31150	0.46	-0.6
5,983,371	-		PFLU_RS31150	0.46	+1.1
5,983,371	-		PFLU_RS31150	0.46	-0.3
5,983,371	-		PFLU_RS31150	0.46	-1.0
5,983,371	-		PFLU_RS31150	0.46	-0.5
5,983,371	-		PFLU_RS31150	0.46	-0.2
5,983,371	-		PFLU_RS31150	0.46	+0.2
5,983,473	+				-0.3
5,983,473	+				-0.2
5,983,473	+				-0.2
5,983,474	-				+0.2
5,983,492	+				-0.1
5,983,557	+		PFLU_RS31335	0.28	+0.2
5,983,557	+		PFLU_RS31335	0.28	+2.3
5,983,557	+		PFLU_RS31335	0.28	+0.1
5,983,558	-		PFLU_RS31335	0.28	-0.3
5,983,558	-		PFLU_RS31335	0.28	+0.7
5,983,558	-		PFLU_RS31335	0.28	-0.5
5,983,558	-		PFLU_RS31335	0.28	-1.1
5,983,571	+		PFLU_RS31335	0.33	+0.1
5,983,571	+		PFLU_RS31335	0.33	+0.5
5,983,571	+		PFLU_RS31335	0.33	-0.3
5,983,572	-		PFLU_RS31335	0.33	+0.3
5,983,572	-		PFLU_RS31335	0.33	-1.5
5,983,611	+		PFLU_RS31335	0.48	-0.6
5,983,611	+		PFLU_RS31335	0.48	-2.1
5,983,611	+		PFLU_RS31335	0.48	-1.1
5,983,612	-		PFLU_RS31335	0.48	+1.4
5,983,629	+		PFLU_RS31335	0.55	+0.2
5,983,700	+		PFLU_RS31335	0.81	-1.1
5,983,755	+				+0.6
5,983,756	-				-2.6
5,983,789	+				+0.1
5,983,789	+				-0.6
5,983,789	+				+0.7
5,983,789	+				+0.5
5,983,789	+				+0.5
5,983,790	-				+1.0
5,983,790	-				+1.0
5,983,790	-				-0.7
5,983,790	-				-0.0
5,983,790	-				+1.6
5,983,790	-				-0.8
5,983,835	+				-0.7
5,983,835	+				-0.3
5,983,835	+				-0.3
5,983,835	+				-1.4
5,983,835	+				-0.9
5,983,835	+				+0.5
5,983,836	-				+1.2
5,983,836	-				-0.9
5,983,836	-				-0.6
5,983,853	+				+0.1
5,983,867	+				+0.1
5,983,867	+				+0.6
5,983,867	+				+0.6
5,983,867	+				+0.6
5,983,867	+				-0.3
5,983,868	-				-0.0
5,983,868	-				+0.5
5,983,868	-				+0.2
5,983,868	-				-1.4
5,983,878	-				-1.6
5,983,934	-				+2.3
5,983,934	-				+1.4
5,983,944	+				-1.3
5,983,944	+				+2.2
5,983,945	-				-0.3
5,983,945	-				-1.0
5,983,945	-				+0.4
5,983,959	+				+1.0
5,983,959	+				+1.3
5,983,959	+				+0.0
5,983,959	+				+1.5
5,983,959	+				-0.2
5,983,959	+				-0.3
5,983,959	+				-1.7
5,983,959	+				+1.7
5,983,960	-				+1.8
5,983,960	-				+0.0
5,983,960	-				-1.7
5,983,960	-				-0.6
5,983,960	-				+1.0
5,983,960	-				-0.7
5,983,960	-				-0.3
5,983,960	-				-1.0
5,983,960	-				-3.0
5,983,960	-				-0.9
5,983,960	-				-0.7
5,983,960	-				+1.0
5,983,980	+				-1.1
5,983,980	+				-0.5
5,983,980	+				-0.6
5,983,980	+				-0.3
5,983,980	+				+2.7
5,983,980	+				+0.8
5,983,981	-				+0.1
5,983,981	-				+0.3
5,983,981	-				-1.3
5,983,981	-				-0.8
5,983,981	-				+0.3
5,983,981	-				-2.1
5,983,981	-				+0.4
5,983,981	-				-0.8
5,984,067	+				-0.3
5,984,067	+				-1.0
5,984,067	+				+0.1
5,984,067	+				+0.3
5,984,067	+				+0.6
5,984,067	+				-0.8
5,984,067	+				+0.4
5,984,067	+				-2.1
5,984,067	+				-2.4
5,984,068	-				-0.9
5,984,068	-				+0.2
5,984,068	-				+0.2
5,984,068	-				-1.0
5,984,068	-				-0.5
5,984,068	-				-0.6
5,984,068	-				+1.3
5,984,068	-				-0.5
5,984,068	-				+0.1
5,984,162	+		PFLU_RS31155	0.16	+0.0
5,984,224	+		PFLU_RS31155	0.27	-1.0
5,984,225	-		PFLU_RS31155	0.28	-1.3
5,984,235	-		PFLU_RS31155	0.29	-0.3
5,984,235	-		PFLU_RS31155	0.29	+0.3
5,984,235	-		PFLU_RS31155	0.29	-1.7
5,984,238	-		PFLU_RS31155	0.30	-0.3
5,984,244	+		PFLU_RS31155	0.31	-0.4
5,984,244	+		PFLU_RS31155	0.31	-1.6
5,984,244	+		PFLU_RS31155	0.31	+0.7
5,984,244	+		PFLU_RS31155	0.31	+1.1
5,984,245	-		PFLU_RS31155	0.31	+0.0
5,984,245	-		PFLU_RS31155	0.31	-0.5
5,984,245	-		PFLU_RS31155	0.31	+0.2
5,984,245	-		PFLU_RS31155	0.31	+0.5
5,984,245	-		PFLU_RS31155	0.31	-0.0
5,984,245	-		PFLU_RS31155	0.31	-0.6
5,984,247	+		PFLU_RS31155	0.31	+0.0
5,984,247	+		PFLU_RS31155	0.31	-0.0
5,984,247	+		PFLU_RS31155	0.31	-0.1
5,984,247	+		PFLU_RS31155	0.31	-0.6
5,984,247	+		PFLU_RS31155	0.31	+1.1
5,984,247	+		PFLU_RS31155	0.31	+0.2
5,984,247	+		PFLU_RS31155	0.31	+1.2
5,984,247	+		PFLU_RS31155	0.31	-0.4
5,984,247	+		PFLU_RS31155	0.31	+0.6
5,984,247	+		PFLU_RS31155	0.31	+0.9
5,984,248	-		PFLU_RS31155	0.32	-0.9
5,984,248	-		PFLU_RS31155	0.32	-0.8
5,984,248	-		PFLU_RS31155	0.32	-0.4
5,984,248	-		PFLU_RS31155	0.32	-0.2
5,984,248	-		PFLU_RS31155	0.32	+0.2
5,984,248	-		PFLU_RS31155	0.32	+0.9
5,984,248	-		PFLU_RS31155	0.32	-0.5
5,984,248	-		PFLU_RS31155	0.32	+0.5
5,984,248	-		PFLU_RS31155	0.32	-0.5
5,984,248	-		PFLU_RS31155	0.32	-1.3