Experiment: L-Proline (C) 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02210 and PFLU_RS02215 are separated by 277 nucleotides PFLU_RS02215 and PFLU_RS02220 overlap by 4 nucleotides PFLU_RS02220 and PFLU_RS02225 overlap by 4 nucleotides
PFLU_RS02210: PFLU_RS02210 - methyl-accepting chemotaxis protein, at 496,151 to 497,776
_RS02210
PFLU_RS02215: PFLU_RS02215 - hypothetical protein, at 498,054 to 498,284
_RS02215
PFLU_RS02220: PFLU_RS02220 - cell division protein ZapA, at 498,281 to 498,574
_RS02220
PFLU_RS02225: PFLU_RS02225 - acyl-CoA dehydrogenase, at 498,571 to 500,373
_RS02225
Position (kb) 498
499 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 497.223 kb on + strand, within PFLU_RS02210 at 497.223 kb on + strand, within PFLU_RS02210 at 497.223 kb on + strand, within PFLU_RS02210 at 497.223 kb on + strand, within PFLU_RS02210 at 497.223 kb on + strand, within PFLU_RS02210 at 497.223 kb on + strand, within PFLU_RS02210 at 497.223 kb on + strand, within PFLU_RS02210 at 497.224 kb on - strand, within PFLU_RS02210 at 497.224 kb on - strand, within PFLU_RS02210 at 497.224 kb on - strand, within PFLU_RS02210 at 497.224 kb on - strand, within PFLU_RS02210 at 497.224 kb on - strand, within PFLU_RS02210 at 497.224 kb on - strand, within PFLU_RS02210 at 497.224 kb on - strand, within PFLU_RS02210 at 497.271 kb on + strand, within PFLU_RS02210 at 497.271 kb on + strand, within PFLU_RS02210 at 497.272 kb on - strand, within PFLU_RS02210 at 497.272 kb on - strand, within PFLU_RS02210 at 497.272 kb on - strand, within PFLU_RS02210 at 497.272 kb on - strand, within PFLU_RS02210 at 497.272 kb on - strand, within PFLU_RS02210 at 497.272 kb on - strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.321 kb on + strand, within PFLU_RS02210 at 497.322 kb on - strand, within PFLU_RS02210 at 497.322 kb on - strand, within PFLU_RS02210 at 497.322 kb on - strand, within PFLU_RS02210 at 497.322 kb on - strand, within PFLU_RS02210 at 497.322 kb on - strand, within PFLU_RS02210 at 497.322 kb on - strand, within PFLU_RS02210 at 497.322 kb on - strand, within PFLU_RS02210 at 497.403 kb on + strand, within PFLU_RS02210 at 497.403 kb on + strand, within PFLU_RS02210 at 497.404 kb on - strand, within PFLU_RS02210 at 497.424 kb on + strand, within PFLU_RS02210 at 497.424 kb on + strand, within PFLU_RS02210 at 497.424 kb on + strand, within PFLU_RS02210 at 497.424 kb on + strand, within PFLU_RS02210 at 497.424 kb on + strand, within PFLU_RS02210 at 497.425 kb on - strand, within PFLU_RS02210 at 497.425 kb on - strand, within PFLU_RS02210 at 497.425 kb on - strand, within PFLU_RS02210 at 497.425 kb on - strand, within PFLU_RS02210 at 497.433 kb on + strand, within PFLU_RS02210 at 497.433 kb on + strand, within PFLU_RS02210 at 497.434 kb on - strand, within PFLU_RS02210 at 497.472 kb on + strand, within PFLU_RS02210 at 497.473 kb on - strand, within PFLU_RS02210 at 497.473 kb on - strand, within PFLU_RS02210 at 497.568 kb on + strand, within PFLU_RS02210 at 497.695 kb on + strand at 497.722 kb on + strand at 497.723 kb on - strand at 497.755 kb on + strand at 497.756 kb on - strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.761 kb on + strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.762 kb on - strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.764 kb on + strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.765 kb on - strand at 497.768 kb on + strand at 497.768 kb on + strand at 497.769 kb on - strand at 497.769 kb on - strand at 497.769 kb on - strand at 497.769 kb on - strand at 497.843 kb on + strand at 497.843 kb on + strand at 497.844 kb on - strand at 497.849 kb on + strand at 497.849 kb on + strand at 497.902 kb on + strand at 497.935 kb on + strand at 497.936 kb on - strand at 497.936 kb on - strand at 498.016 kb on + strand at 498.016 kb on + strand at 498.058 kb on + strand at 498.103 kb on + strand, within PFLU_RS02215 at 498.103 kb on + strand, within PFLU_RS02215 at 498.104 kb on - strand, within PFLU_RS02215 at 498.104 kb on - strand, within PFLU_RS02215 at 498.104 kb on - strand, within PFLU_RS02215 at 498.294 kb on + strand at 498.295 kb on - strand at 498.295 kb on - strand at 498.352 kb on + strand, within PFLU_RS02220 at 498.352 kb on + strand, within PFLU_RS02220 at 498.353 kb on - strand, within PFLU_RS02220 at 498.438 kb on + strand, within PFLU_RS02220 at 498.438 kb on + strand, within PFLU_RS02220 at 498.438 kb on + strand, within PFLU_RS02220 at 498.438 kb on + strand, within PFLU_RS02220 at 498.439 kb on - strand, within PFLU_RS02220 at 498.439 kb on - strand, within PFLU_RS02220 at 498.439 kb on - strand, within PFLU_RS02220 at 498.439 kb on - strand, within PFLU_RS02220 at 498.439 kb on - strand, within PFLU_RS02220 at 498.439 kb on - strand, within PFLU_RS02220 at 498.572 kb on + strand at 498.572 kb on + strand at 498.572 kb on + strand at 498.572 kb on + strand at 498.572 kb on + strand at 498.572 kb on + strand at 498.572 kb on + strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.573 kb on - strand at 498.591 kb on + strand at 498.591 kb on + strand at 498.591 kb on + strand at 498.591 kb on + strand at 498.592 kb on - strand at 498.592 kb on - strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.603 kb on + strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.604 kb on - strand at 498.649 kb on + strand at 498.649 kb on + strand at 498.668 kb on + strand at 498.668 kb on + strand at 498.693 kb on + strand at 498.694 kb on - strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.695 kb on + strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.696 kb on - strand at 498.780 kb on + strand, within PFLU_RS02225 at 498.780 kb on + strand, within PFLU_RS02225 at 498.781 kb on - strand, within PFLU_RS02225 at 498.800 kb on + strand, within PFLU_RS02225 at 498.800 kb on + strand, within PFLU_RS02225 at 498.800 kb on + strand, within PFLU_RS02225 at 498.800 kb on + strand, within PFLU_RS02225 at 498.801 kb on - strand, within PFLU_RS02225 at 498.801 kb on - strand, within PFLU_RS02225 at 498.801 kb on - strand, within PFLU_RS02225 at 498.929 kb on + strand, within PFLU_RS02225 at 498.929 kb on + strand, within PFLU_RS02225 at 499.080 kb on - strand, within PFLU_RS02225 at 499.080 kb on - strand, within PFLU_RS02225 at 499.082 kb on + strand, within PFLU_RS02225 at 499.082 kb on + strand, within PFLU_RS02225 at 499.082 kb on + strand, within PFLU_RS02225 at 499.082 kb on + strand, within PFLU_RS02225 at 499.082 kb on + strand, within PFLU_RS02225 at 499.082 kb on + strand, within PFLU_RS02225 at 499.083 kb on - strand, within PFLU_RS02225 at 499.083 kb on - strand, within PFLU_RS02225 at 499.083 kb on - strand, within PFLU_RS02225 at 499.083 kb on - strand, within PFLU_RS02225 at 499.083 kb on - strand, within PFLU_RS02225 at 499.109 kb on + strand, within PFLU_RS02225 at 499.109 kb on + strand, within PFLU_RS02225 at 499.110 kb on - strand, within PFLU_RS02225 at 499.110 kb on - strand, within PFLU_RS02225 at 499.110 kb on - strand, within PFLU_RS02225 at 499.110 kb on - strand, within PFLU_RS02225 at 499.110 kb on - strand, within PFLU_RS02225 at 499.110 kb on - strand, within PFLU_RS02225
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) 10 mM remove 497,223 + PFLU_RS02210 0.66 -0.3 497,223 + PFLU_RS02210 0.66 +0.8 497,223 + PFLU_RS02210 0.66 -0.1 497,223 + PFLU_RS02210 0.66 +0.2 497,223 + PFLU_RS02210 0.66 +0.7 497,223 + PFLU_RS02210 0.66 -0.6 497,223 + PFLU_RS02210 0.66 +0.4 497,224 - PFLU_RS02210 0.66 -0.1 497,224 - PFLU_RS02210 0.66 -0.3 497,224 - PFLU_RS02210 0.66 -0.1 497,224 - PFLU_RS02210 0.66 -1.3 497,224 - PFLU_RS02210 0.66 +0.7 497,224 - PFLU_RS02210 0.66 +1.1 497,224 - PFLU_RS02210 0.66 +0.7 497,271 + PFLU_RS02210 0.69 -0.8 497,271 + PFLU_RS02210 0.69 +0.4 497,272 - PFLU_RS02210 0.69 -0.3 497,272 - PFLU_RS02210 0.69 +0.2 497,272 - PFLU_RS02210 0.69 +0.3 497,272 - PFLU_RS02210 0.69 -0.9 497,272 - PFLU_RS02210 0.69 -0.0 497,272 - PFLU_RS02210 0.69 +0.5 497,321 + PFLU_RS02210 0.72 -0.4 497,321 + PFLU_RS02210 0.72 +0.8 497,321 + PFLU_RS02210 0.72 -0.6 497,321 + PFLU_RS02210 0.72 -0.8 497,321 + PFLU_RS02210 0.72 +0.6 497,321 + PFLU_RS02210 0.72 +0.1 497,321 + PFLU_RS02210 0.72 -0.9 497,321 + PFLU_RS02210 0.72 -2.4 497,321 + PFLU_RS02210 0.72 +1.4 497,321 + PFLU_RS02210 0.72 -1.3 497,321 + PFLU_RS02210 0.72 -0.1 497,321 + PFLU_RS02210 0.72 +0.4 497,322 - PFLU_RS02210 0.72 +0.8 497,322 - PFLU_RS02210 0.72 -0.2 497,322 - PFLU_RS02210 0.72 -0.4 497,322 - PFLU_RS02210 0.72 +3.4 497,322 - PFLU_RS02210 0.72 +1.1 497,322 - PFLU_RS02210 0.72 +0.8 497,322 - PFLU_RS02210 0.72 -0.3 497,403 + PFLU_RS02210 0.77 +0.4 497,403 + PFLU_RS02210 0.77 -0.4 497,404 - PFLU_RS02210 0.77 +0.2 497,424 + PFLU_RS02210 0.78 -0.9 497,424 + PFLU_RS02210 0.78 -0.4 497,424 + PFLU_RS02210 0.78 -0.9 497,424 + PFLU_RS02210 0.78 +1.1 497,424 + PFLU_RS02210 0.78 -0.3 497,425 - PFLU_RS02210 0.78 -1.3 497,425 - PFLU_RS02210 0.78 +0.1 497,425 - PFLU_RS02210 0.78 -0.4 497,425 - PFLU_RS02210 0.78 +0.3 497,433 + PFLU_RS02210 0.79 +0.3 497,433 + PFLU_RS02210 0.79 -0.8 497,434 - PFLU_RS02210 0.79 -0.2 497,472 + PFLU_RS02210 0.81 +0.1 497,473 - PFLU_RS02210 0.81 +0.8 497,473 - PFLU_RS02210 0.81 +0.1 497,568 + PFLU_RS02210 0.87 +0.1 497,695 + +0.5 497,722 + +0.5 497,723 - +0.9 497,755 + +2.1 497,756 - -0.9 497,761 + +0.8 497,761 + +0.1 497,761 + -0.9 497,761 + -0.0 497,761 + -0.0 497,761 + -0.3 497,761 + +0.1 497,761 + +1.1 497,761 + -0.5 497,761 + +0.3 497,761 + -1.1 497,761 + -0.5 497,762 - +0.4 497,762 - +0.1 497,762 - -0.7 497,762 - -0.6 497,762 - +0.6 497,762 - +0.0 497,762 - +0.3 497,762 - -1.3 497,762 - -0.0 497,762 - +1.0 497,762 - -0.6 497,762 - -0.1 497,762 - +3.0 497,762 - -0.3 497,764 + -0.2 497,764 + +1.0 497,764 + +0.0 497,764 + +0.2 497,764 + +0.6 497,764 + +0.2 497,764 + +0.2 497,764 + +0.1 497,764 + +0.4 497,764 + +0.4 497,765 - -0.7 497,765 - +1.4 497,765 - -0.2 497,765 - -1.3 497,765 - +1.6 497,765 - +1.1 497,765 - +0.6 497,765 - +1.1 497,765 - -2.9 497,765 - -0.3 497,765 - -0.1 497,765 - -1.2 497,765 - +1.1 497,768 + -0.2 497,768 + -0.3 497,769 - +1.0 497,769 - +0.5 497,769 - -0.5 497,769 - -0.2 497,843 + +0.2 497,843 + +0.7 497,844 - +1.0 497,849 + -0.9 497,849 + -0.6 497,902 + -0.4 497,935 + -0.5 497,936 - -2.0 497,936 - +0.5 498,016 + -1.9 498,016 + +0.2 498,058 + -0.9 498,103 + PFLU_RS02215 0.21 -1.4 498,103 + PFLU_RS02215 0.21 -0.9 498,104 - PFLU_RS02215 0.22 +0.7 498,104 - PFLU_RS02215 0.22 -0.6 498,104 - PFLU_RS02215 0.22 -0.8 498,294 + +1.0 498,295 - -0.3 498,295 - -0.5 498,352 + PFLU_RS02220 0.24 -0.4 498,352 + PFLU_RS02220 0.24 -0.5 498,353 - PFLU_RS02220 0.24 -0.3 498,438 + PFLU_RS02220 0.53 -0.6 498,438 + PFLU_RS02220 0.53 +0.8 498,438 + PFLU_RS02220 0.53 +0.5 498,438 + PFLU_RS02220 0.53 -0.3 498,439 - PFLU_RS02220 0.54 +0.6 498,439 - PFLU_RS02220 0.54 -1.3 498,439 - PFLU_RS02220 0.54 +1.1 498,439 - PFLU_RS02220 0.54 -0.3 498,439 - PFLU_RS02220 0.54 -0.5 498,439 - PFLU_RS02220 0.54 -1.1 498,572 + +0.2 498,572 + +1.4 498,572 + +0.8 498,572 + +1.3 498,572 + -0.1 498,572 + +0.3 498,572 + -0.5 498,573 - -0.2 498,573 - -1.3 498,573 - -0.5 498,573 - -0.5 498,573 - -0.2 498,573 - -0.7 498,573 - -0.7 498,573 - +0.8 498,573 - +0.3 498,573 - -0.0 498,591 + -0.9 498,591 + +0.2 498,591 + -1.0 498,591 + +0.9 498,592 - +0.3 498,592 - -0.6 498,603 + -0.2 498,603 + +0.6 498,603 + +0.5 498,603 + +0.2 498,603 + +0.6 498,603 + -0.2 498,603 + +0.3 498,603 + -0.1 498,603 + -1.0 498,603 + -0.3 498,603 + +1.0 498,603 + +0.1 498,603 + +0.4 498,603 + -0.2 498,604 - +1.5 498,604 - +0.1 498,604 - -0.8 498,604 - -0.3 498,604 - +0.1 498,604 - -0.4 498,604 - -0.1 498,604 - +2.4 498,604 - -0.0 498,604 - -1.5 498,604 - -1.0 498,604 - -0.4 498,604 - +2.4 498,604 - +0.1 498,604 - -0.1 498,604 - +1.4 498,604 - +0.1 498,604 - +0.1 498,604 - -0.1 498,649 + -0.2 498,649 + +0.7 498,668 + -0.2 498,668 + -0.2 498,693 + -0.4 498,694 - -1.6 498,695 + +0.1 498,695 + -0.8 498,695 + -0.2 498,695 + -0.3 498,695 + -0.4 498,695 + -0.8 498,695 + -0.5 498,695 + -0.4 498,695 + -0.3 498,695 + -1.4 498,695 + +0.6 498,695 + -0.3 498,695 + +0.2 498,695 + +0.3 498,695 + -0.2 498,695 + +1.9 498,695 + -1.4 498,696 - -0.1 498,696 - -0.3 498,696 - +1.4 498,696 - +0.8 498,696 - -0.5 498,696 - +0.2 498,696 - +2.3 498,696 - -0.5 498,696 - -0.4 498,696 - -0.7 498,696 - +0.5 498,696 - +0.8 498,696 - +0.4 498,696 - +0.1 498,696 - +0.2 498,696 - +0.3 498,780 + PFLU_RS02225 0.12 -0.1 498,780 + PFLU_RS02225 0.12 -0.3 498,781 - PFLU_RS02225 0.12 +0.6 498,800 + PFLU_RS02225 0.13 -0.3 498,800 + PFLU_RS02225 0.13 -0.8 498,800 + PFLU_RS02225 0.13 +0.3 498,800 + PFLU_RS02225 0.13 -0.1 498,801 - PFLU_RS02225 0.13 +0.1 498,801 - PFLU_RS02225 0.13 +0.1 498,801 - PFLU_RS02225 0.13 -0.2 498,929 + PFLU_RS02225 0.20 -1.1 498,929 + PFLU_RS02225 0.20 +0.3 499,080 - PFLU_RS02225 0.28 +0.3 499,080 - PFLU_RS02225 0.28 -1.9 499,082 + PFLU_RS02225 0.28 +0.2 499,082 + PFLU_RS02225 0.28 +0.7 499,082 + PFLU_RS02225 0.28 +0.0 499,082 + PFLU_RS02225 0.28 -0.3 499,082 + PFLU_RS02225 0.28 -0.1 499,082 + PFLU_RS02225 0.28 +0.8 499,083 - PFLU_RS02225 0.28 +0.6 499,083 - PFLU_RS02225 0.28 -1.7 499,083 - PFLU_RS02225 0.28 +0.3 499,083 - PFLU_RS02225 0.28 +2.9 499,083 - PFLU_RS02225 0.28 -0.4 499,109 + PFLU_RS02225 0.30 +0.3 499,109 + PFLU_RS02225 0.30 +0.1 499,110 - PFLU_RS02225 0.30 +1.2 499,110 - PFLU_RS02225 0.30 -0.2 499,110 - PFLU_RS02225 0.30 +1.1 499,110 - PFLU_RS02225 0.30 +2.4 499,110 - PFLU_RS02225 0.30 -1.9 499,110 - PFLU_RS02225 0.30 +1.4
Or see this region's nucleotide sequence