Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04485

Experiment: Glycerol (C) 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C) 20 mM
1,005,360	-		PFLU_RS04480	0.25	-1.1
1,005,418	+		PFLU_RS04480	0.30	+0.7
1,005,418	+		PFLU_RS04480	0.30	+0.2
1,005,418	+		PFLU_RS04480	0.30	+0.5
1,005,418	+		PFLU_RS04480	0.30	+0.4
1,005,418	+		PFLU_RS04480	0.30	+0.8
1,005,418	+		PFLU_RS04480	0.30	-0.2
1,005,418	+		PFLU_RS04480	0.30	-1.2
1,005,419	-		PFLU_RS04480	0.30	-0.0
1,005,419	-		PFLU_RS04480	0.30	+1.1
1,005,419	-		PFLU_RS04480	0.30	-0.1
1,005,419	-		PFLU_RS04480	0.30	-0.5
1,005,419	-		PFLU_RS04480	0.30	+0.1
1,005,419	-		PFLU_RS04480	0.30	+0.1
1,005,419	-		PFLU_RS04480	0.30	+0.6
1,005,419	-		PFLU_RS04480	0.30	-0.1
1,005,419	-		PFLU_RS04480	0.30	+1.2
1,005,419	-		PFLU_RS04480	0.30	+1.0
1,005,419	-		PFLU_RS04480	0.30	-0.3
1,005,419	-		PFLU_RS04480	0.30	+0.7
1,005,419	-		PFLU_RS04480	0.30	-0.9
1,005,419	-		PFLU_RS04480	0.30	-1.7
1,005,419	-		PFLU_RS04480	0.30	-0.9
1,005,419	-		PFLU_RS04480	0.30	+0.3
1,005,457	+		PFLU_RS04480	0.33	-1.0
1,005,457	+		PFLU_RS04480	0.33	-0.2
1,005,457	+		PFLU_RS04480	0.33	+0.7
1,005,457	+		PFLU_RS04480	0.33	-0.5
1,005,457	+		PFLU_RS04480	0.33	+1.0
1,005,458	-		PFLU_RS04480	0.33	-0.1
1,005,458	-		PFLU_RS04480	0.33	-0.4
1,005,458	-		PFLU_RS04480	0.33	-0.4
1,005,458	-		PFLU_RS04480	0.33	-0.9
1,005,458	-		PFLU_RS04480	0.33	-1.0
1,005,524	+		PFLU_RS04480	0.38	-1.0
1,005,524	+		PFLU_RS04480	0.38	-0.9
1,005,524	+		PFLU_RS04480	0.38	+0.1
1,005,524	+		PFLU_RS04480	0.38	-0.1
1,005,524	+		PFLU_RS04480	0.38	-2.0
1,005,524	+		PFLU_RS04480	0.38	+0.4
1,005,525	-		PFLU_RS04480	0.38	+0.6
1,005,525	-		PFLU_RS04480	0.38	+1.2
1,005,525	-		PFLU_RS04480	0.38	+0.1
1,005,525	-		PFLU_RS04480	0.38	+0.1
1,005,525	-		PFLU_RS04480	0.38	-0.9
1,005,525	-		PFLU_RS04480	0.38	-0.3
1,005,550	+		PFLU_RS04480	0.40	+0.8
1,005,551	-		PFLU_RS04480	0.40	+0.9
1,005,593	+		PFLU_RS04480	0.43	+1.1
1,005,593	+		PFLU_RS04480	0.43	+0.2
1,005,594	-		PFLU_RS04480	0.44	+0.2
1,005,594	-		PFLU_RS04480	0.44	+0.4
1,005,625	-		PFLU_RS04480	0.46	+0.1
1,005,727	+		PFLU_RS04480	0.54	-0.6
1,005,727	+		PFLU_RS04480	0.54	+0.3
1,005,728	-		PFLU_RS04480	0.54	+0.8
1,005,728	-		PFLU_RS04480	0.54	-1.0
1,005,728	-		PFLU_RS04480	0.54	-0.1
1,005,728	-		PFLU_RS04480	0.54	+1.1
1,005,728	-		PFLU_RS04480	0.54	+0.3
1,005,785	+		PFLU_RS04480	0.59	+0.2
1,005,785	+		PFLU_RS04480	0.59	+0.7
1,005,786	-		PFLU_RS04480	0.59	+0.3
1,005,786	-		PFLU_RS04480	0.59	+1.5
1,005,786	-		PFLU_RS04480	0.59	+0.0
1,005,856	+		PFLU_RS04480	0.64	+0.6
1,005,857	-		PFLU_RS04480	0.64	+0.6
1,005,887	+		PFLU_RS04480	0.67	+0.3
1,005,888	-		PFLU_RS04480	0.67	-0.7
1,005,888	-		PFLU_RS04480	0.67	-0.8
1,005,978	+		PFLU_RS04480	0.74	-0.1
1,005,978	+		PFLU_RS04480	0.74	+2.3
1,005,978	+		PFLU_RS04480	0.74	+0.3
1,005,978	+		PFLU_RS04480	0.74	+0.5
1,005,979	-		PFLU_RS04480	0.74	-1.1
1,005,979	-		PFLU_RS04480	0.74	+2.3
1,005,979	-		PFLU_RS04480	0.74	+0.6
1,005,979	-		PFLU_RS04480	0.74	+0.0
1,005,980	+		PFLU_RS04480	0.74	+1.9
1,005,980	+		PFLU_RS04480	0.74	-1.3
1,005,980	+		PFLU_RS04480	0.74	-1.0
1,005,981	-		PFLU_RS04480	0.74	+0.2
1,005,981	-		PFLU_RS04480	0.74	+0.2
1,005,981	-		PFLU_RS04480	0.74	-1.0
1,006,022	+		PFLU_RS04480	0.77	+0.2
1,006,022	+		PFLU_RS04480	0.77	-0.3
1,006,022	+		PFLU_RS04480	0.77	-0.4
1,006,022	+		PFLU_RS04480	0.77	+1.0
1,006,022	+		PFLU_RS04480	0.77	+0.7
1,006,022	+		PFLU_RS04480	0.77	-0.9
1,006,022	+		PFLU_RS04480	0.77	+0.2
1,006,023	-		PFLU_RS04480	0.77	+0.2
1,006,023	-		PFLU_RS04480	0.77	-0.7
1,006,023	-		PFLU_RS04480	0.77	+0.5
1,006,023	-		PFLU_RS04480	0.77	+0.0
1,006,023	-		PFLU_RS04480	0.77	+0.6
1,006,023	-		PFLU_RS04480	0.77	-0.3
1,006,023	-		PFLU_RS04480	0.77	-0.9
1,006,024	+		PFLU_RS04480	0.77	-0.3
1,006,024	+		PFLU_RS04480	0.77	-0.3
1,006,024	+		PFLU_RS04480	0.77	-0.3
1,006,024	+		PFLU_RS04480	0.77	-1.0
1,006,025	-		PFLU_RS04480	0.77	+0.6
1,006,025	-		PFLU_RS04480	0.77	+0.3
1,006,025	-		PFLU_RS04480	0.77	+0.4
1,006,169	+		PFLU_RS04480	0.89	-0.3
1,006,169	+		PFLU_RS04480	0.89	+0.6
1,006,170	-		PFLU_RS04480	0.89	-1.3
1,006,170	-		PFLU_RS04480	0.89	+0.8
1,006,249	-				-0.4
1,006,380	+		PFLU_RS04485	0.10	+0.2
1,006,380	+		PFLU_RS04485	0.10	+0.5
1,006,380	+		PFLU_RS04485	0.10	+0.0
1,006,381	-		PFLU_RS04485	0.10	-0.4
1,006,381	-		PFLU_RS04485	0.10	-0.6
1,006,381	-		PFLU_RS04485	0.10	-1.9
1,006,381	-		PFLU_RS04485	0.10	-0.3
1,006,381	-		PFLU_RS04485	0.10	+0.2
1,006,381	-		PFLU_RS04485	0.10	-1.7
1,006,381	-		PFLU_RS04485	0.10	-1.1
1,006,381	-		PFLU_RS04485	0.10	+1.0
1,006,381	-		PFLU_RS04485	0.10	-0.6
1,006,381	-		PFLU_RS04485	0.10	-0.2
1,006,381	-		PFLU_RS04485	0.10	-0.7
1,006,381	-		PFLU_RS04485	0.10	-0.5
1,006,381	-		PFLU_RS04485	0.10	+0.5
1,006,419	+		PFLU_RS04485	0.16	-0.5
1,006,419	+		PFLU_RS04485	0.16	-0.0
1,006,419	+		PFLU_RS04485	0.16	-0.1
1,006,419	+		PFLU_RS04485	0.16	-0.3
1,006,420	-		PFLU_RS04485	0.16	+0.9
1,006,420	-		PFLU_RS04485	0.16	+0.4
1,006,420	-		PFLU_RS04485	0.16	+1.3
1,006,420	-		PFLU_RS04485	0.16	+0.6
1,006,617	+		PFLU_RS04485	0.47	+0.1
1,006,617	+		PFLU_RS04485	0.47	+1.5
1,006,617	+		PFLU_RS04485	0.47	-0.8
1,006,617	+		PFLU_RS04485	0.47	+1.3
1,006,617	+		PFLU_RS04485	0.47	+0.6
1,006,617	+		PFLU_RS04485	0.47	+1.0
1,006,618	-		PFLU_RS04485	0.47	+0.7
1,006,618	-		PFLU_RS04485	0.47	+0.3
1,006,618	-		PFLU_RS04485	0.47	-0.8
1,006,618	-		PFLU_RS04485	0.47	+0.8
1,006,618	-		PFLU_RS04485	0.47	-0.4
1,006,618	-		PFLU_RS04485	0.47	+0.3
1,006,618	-		PFLU_RS04485	0.47	+0.5
1,006,618	-		PFLU_RS04485	0.47	+0.6
1,006,621	+		PFLU_RS04485	0.48	-0.6
1,006,621	+		PFLU_RS04485	0.48	-1.1
1,006,621	+		PFLU_RS04485	0.48	-0.0
1,006,621	+		PFLU_RS04485	0.48	+2.9
1,006,621	+		PFLU_RS04485	0.48	+0.3
1,006,622	-		PFLU_RS04485	0.48	-0.5
1,006,622	-		PFLU_RS04485	0.48	-0.4
1,006,622	-		PFLU_RS04485	0.48	+0.3
1,006,622	-		PFLU_RS04485	0.48	-0.1
1,006,800	+		PFLU_RS04485	0.76	+0.2
1,006,800	+		PFLU_RS04485	0.76	-0.6
1,006,800	+		PFLU_RS04485	0.76	+0.6
1,006,800	+		PFLU_RS04485	0.76	-0.6
1,006,800	+		PFLU_RS04485	0.76	-0.8
1,006,800	+		PFLU_RS04485	0.76	+0.3
1,006,801	-		PFLU_RS04485	0.76	+0.5
1,006,801	-		PFLU_RS04485	0.76	-0.6
1,006,801	-		PFLU_RS04485	0.76	+0.4
1,006,801	-		PFLU_RS04485	0.76	-0.8
1,006,801	-		PFLU_RS04485	0.76	+0.7
1,006,801	-		PFLU_RS04485	0.76	-0.3
1,006,801	-		PFLU_RS04485	0.76	-0.6
1,006,801	-		PFLU_RS04485	0.76	+4.3
1,006,801	-		PFLU_RS04485	0.76	+0.3
1,006,801	-		PFLU_RS04485	0.76	-1.0
1,006,815	-		PFLU_RS04485	0.78	+0.5
1,006,815	-		PFLU_RS04485	0.78	+0.6
1,006,815	-		PFLU_RS04485	0.78	-0.5
1,006,833	+		PFLU_RS04485	0.81	+0.1
1,006,833	+		PFLU_RS04485	0.81	-0.1
1,006,833	+		PFLU_RS04485	0.81	+0.6
1,006,833	+		PFLU_RS04485	0.81	+0.2
1,006,833	+		PFLU_RS04485	0.81	+0.5
1,006,833	+		PFLU_RS04485	0.81	-0.8
1,006,833	+		PFLU_RS04485	0.81	+1.3
1,006,833	+		PFLU_RS04485	0.81	-1.6
1,006,833	+		PFLU_RS04485	0.81	+1.3
1,006,834	-		PFLU_RS04485	0.81	+0.9
1,006,834	-		PFLU_RS04485	0.81	-1.5
1,006,834	-		PFLU_RS04485	0.81	+0.9
1,006,834	-		PFLU_RS04485	0.81	+0.3
1,006,834	-		PFLU_RS04485	0.81	+0.1
1,006,885	+		PFLU_RS04485	0.89	+0.1
1,006,885	+		PFLU_RS04485	0.89	-0.2
1,006,885	+		PFLU_RS04485	0.89	+1.7
1,006,886	-		PFLU_RS04485	0.89	-0.5
1,006,886	-		PFLU_RS04485	0.89	-0.3
1,006,886	-		PFLU_RS04485	0.89	-0.2
1,006,886	-		PFLU_RS04485	0.89	+1.3
1,006,886	-		PFLU_RS04485	0.89	-0.7
1,006,886	-		PFLU_RS04485	0.89	-0.0
1,006,886	-		PFLU_RS04485	0.89	+0.4
1,006,886	-		PFLU_RS04485	0.89	+1.0
1,006,990	+				+1.3
1,006,990	+				-0.9
1,006,990	+				-0.3
1,006,990	+				+0.8
1,006,991	-				+0.8
1,006,991	-				-0.3
1,006,995	+				+0.9
1,006,996	-				-0.6
1,006,996	-				+1.6
1,007,000	+				-1.1
1,007,000	+				-1.2
1,007,001	-				+2.9
1,007,001	-				-0.9
1,007,001	-				+0.2
1,007,001	-				-0.3
1,007,018	+				+0.8
1,007,018	+				-1.6
1,007,018	+				+0.7
1,007,019	-				-0.3
1,007,019	-				-0.6
1,007,019	-				-1.3
1,007,020	+				-1.5
1,007,020	+				-1.8
1,007,020	+				+1.5
1,007,020	+				-1.3
1,007,020	+				+0.1
1,007,020	+				-0.3
1,007,020	+				-0.0
1,007,020	+				-0.1
1,007,020	+				+0.1
1,007,021	-				+0.9
1,007,021	-				+0.9
1,007,021	-				+0.7
1,007,021	-				-0.2
1,007,021	-				+0.2
1,007,021	-				-0.2
1,007,021	-				+1.0
1,007,021	-				+1.2
1,007,021	-				+0.6
1,007,021	-				-0.2
1,007,021	-				+0.1
1,007,021	-				+0.3
1,007,021	-				-0.3
1,007,021	-				+0.5
1,007,028	+				-1.3
1,007,028	+				-2.9
1,007,028	+				+0.7
1,007,028	+				-0.8
1,007,028	+				-0.3
1,007,028	+				+1.1
1,007,028	+				-0.9
1,007,028	+				+0.2
1,007,028	+				+0.5
1,007,028	+				-0.5
1,007,028	+				-0.5
1,007,028	+				-1.3
1,007,028	+				+0.0
1,007,029	-				+0.0
1,007,029	-				-0.3
1,007,029	-				-0.1
1,007,029	-				-0.3
1,007,029	-				-1.9
1,007,029	-				+1.7
1,007,029	-				+0.4
1,007,029	-				+0.1
1,007,029	-				-0.6
1,007,029	-				-0.7
1,007,031	+				+0.4
1,007,031	+				-0.6
1,007,031	+				+0.3
1,007,031	+				-0.8
1,007,031	+				-1.0
1,007,031	+				-0.0
1,007,031	+				-0.1
1,007,031	+				+0.6
1,007,031	+				+0.7
1,007,031	+				+0.7
1,007,031	+				+0.6
1,007,031	+				-1.0
1,007,031	+				+0.3
1,007,031	+				+0.1
1,007,031	+				-0.5
1,007,031	+				-1.0
1,007,031	+				-0.5
1,007,032	-				-1.8
1,007,032	-				+0.8
1,007,032	-				-0.1
1,007,032	-				+0.5
1,007,032	-				+0.7
1,007,032	-				+1.2
1,007,032	-				-1.2
1,007,032	-				+0.3
1,007,032	-				+0.2
1,007,032	-				+0.1
1,007,037	-				+1.1
1,007,037	-				-0.0
1,007,037	-				-0.6
1,007,044	+				-1.6
1,007,044	+				-0.1
1,007,045	-				+0.1
1,007,073	+				+0.1
1,007,073	+				+0.1
1,007,073	+				-2.1
1,007,073	+				-0.4
1,007,074	-				+0.8
1,007,074	-				-0.1
1,007,140	-				+0.6
1,007,140	-				-0.6
1,007,173	+				-1.7
1,007,173	+				-0.1
1,007,173	+				+0.8
1,007,174	-				-1.1
1,007,245	-		PFLU_RS04490	0.23	-0.3
1,007,332	+		PFLU_RS04490	0.38	-0.7
1,007,332	+		PFLU_RS04490	0.38	-0.7
1,007,333	-		PFLU_RS04490	0.38	+0.6
1,007,599	+		PFLU_RS04490	0.86	+1.0
1,007,599	+		PFLU_RS04490	0.86	-0.7
1,007,600	-		PFLU_RS04490	0.86	-0.2
1,007,600	-		PFLU_RS04490	0.86	-0.7
1,007,600	-		PFLU_RS04490	0.86	-0.8
1,007,600	-		PFLU_RS04490	0.86	+2.3
1,007,600	-		PFLU_RS04490	0.86	-1.2
1,007,623	+				+0.9
1,007,623	+				-0.8
1,007,623	+				+2.0
1,007,623	+				+1.0
1,007,623	+				-1.3
1,007,623	+				+0.4
1,007,623	+				+0.6
1,007,623	+				-0.8
1,007,623	+				-1.3
1,007,623	+				+0.9
1,007,623	+				-1.2
1,007,623	+				-0.3
1,007,624	-				+0.3
1,007,624	-				+1.0
1,007,624	-				+0.2
1,007,624	-				-0.7
1,007,624	-				+0.1
1,007,624	-				-2.3
1,007,624	-				-1.3
1,007,624	-				-1.3
1,007,624	-				+1.3
1,007,624	-				+0.4
1,007,624	-				+0.1
1,007,624	-				-0.3
1,007,633	-				+0.2
1,007,656	+				+0.3
1,007,656	+				+0.6
1,007,656	+				-1.9
1,007,656	+				+0.7
1,007,656	+				-2.1
1,007,656	+				-0.6
1,007,656	+				-0.6
1,007,656	+				+0.5
1,007,656	+				-2.0
1,007,657	-				-0.0
1,007,657	-				+0.5
1,007,657	-				+0.6
1,007,657	-				-1.3
1,007,657	-				+0.7
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