Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3114

Experiment: DAC16_cps7_0.1MOI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DAC16_cps7_0.1MOI
3,962,318	+		BT3113	0.39	+0.6
3,962,386	+		BT3113	0.45	-0.5
3,962,491	-		BT3113	0.54	-1.5
3,962,502	+		BT3113	0.55	-2.6
3,962,526	+		BT3113	0.57	-1.1
3,962,526	+		BT3113	0.57	-1.0
3,962,526	+		BT3113	0.57	+1.0
3,962,526	+		BT3113	0.57	-1.4
3,962,526	+		BT3113	0.57	-0.8
3,962,527	-		BT3113	0.57	-1.4
3,962,527	-		BT3113	0.57	-2.2
3,962,527	-		BT3113	0.57	-0.9
3,962,531	-		BT3113	0.58	-0.8
3,962,531	-		BT3113	0.58	-1.4
3,962,553	+		BT3113	0.59	-0.4
3,962,553	+		BT3113	0.59	-2.3
3,962,553	+		BT3113	0.59	-1.6
3,962,554	-		BT3113	0.60	-0.9
3,962,577	+		BT3113	0.62	-0.5
3,962,578	-		BT3113	0.62	+0.3
3,962,578	-		BT3113	0.62	-1.1
3,962,654	-		BT3113	0.68	-0.6
3,962,705	+		BT3113	0.73	-1.3
3,962,856	-		BT3113	0.86	+1.8
3,962,862	-		BT3113	0.87	-1.7
3,962,930	-				-0.5
3,962,989	+				-0.6
3,962,999	-				-0.0
3,962,999	-				-0.0
3,963,010	+				-0.6
3,963,042	-				-0.6
3,963,045	+				-0.6
3,963,079	+				-2.5
3,963,080	-				-2.6
3,963,087	+				+2.0
3,963,088	-				-0.9
3,963,106	+				-1.5
3,963,107	-				-1.4
3,963,161	-				-1.0
3,963,217	+				+1.1
3,963,275	+				-0.0
3,963,275	+				-2.0
3,963,276	-				-2.0
3,963,286	-				-1.9
3,963,289	-				-1.4
3,963,289	-				+0.0
3,963,381	+				+0.4
3,963,382	-				-1.0
3,963,415	+				-0.7
3,963,542	+				+2.3
3,963,543	-				-1.4
3,963,543	-				+0.4
3,963,607	+				-1.8
3,963,683	+		BT3114	0.12	-0.3
3,963,713	-		BT3114	0.13	+1.0
3,963,746	-		BT3114	0.14	-1.1
3,963,808	+		BT3114	0.16	-1.4
3,963,808	+		BT3114	0.16	-2.6
3,963,938	+		BT3114	0.20	-1.1
3,963,938	+		BT3114	0.20	-1.1
3,963,939	-		BT3114	0.20	-2.1
3,963,939	-		BT3114	0.20	-0.8
3,963,960	-		BT3114	0.20	-0.6
3,963,962	-		BT3114	0.20	-0.2
3,963,962	-		BT3114	0.20	+0.4
3,964,064	-		BT3114	0.23	+0.7
3,964,064	-		BT3114	0.23	-0.4
3,964,176	-		BT3114	0.27	+1.0
3,964,176	-		BT3114	0.27	+1.1
3,964,356	-		BT3114	0.32	-0.9
3,964,356	-		BT3114	0.32	-0.8
3,964,387	-		BT3114	0.33	+3.3
3,964,391	-		BT3114	0.33	-0.3
3,964,405	-		BT3114	0.33	-2.0
3,964,414	+		BT3114	0.34	-1.7
3,964,482	+		BT3114	0.36	-1.0
3,964,482	+		BT3114	0.36	-0.9
3,964,484	+		BT3114	0.36	-1.3
3,964,485	-		BT3114	0.36	+0.4
3,964,485	-		BT3114	0.36	-1.5
3,964,604	+		BT3114	0.39	+1.2
3,964,614	+		BT3114	0.40	+0.8
3,964,615	-		BT3114	0.40	-0.7
3,964,645	+		BT3114	0.40	-1.6
3,964,856	+		BT3114	0.47	-0.8
3,964,860	-		BT3114	0.47	+0.4
3,964,861	+		BT3114	0.47	-1.8
3,964,887	-		BT3114	0.48	+0.3
3,964,975	-		BT3114	0.50	-0.5
3,965,070	-		BT3114	0.53	+0.7
3,965,271	-		BT3114	0.59	-0.6
3,965,271	-		BT3114	0.59	-0.5
3,965,271	-		BT3114	0.59	-2.6
3,965,273	+		BT3114	0.59	+0.2
3,965,273	+		BT3114	0.59	-0.4
3,965,288	+		BT3114	0.59	-0.7
3,965,289	-		BT3114	0.59	-1.0
3,965,337	+		BT3114	0.61	-2.0
3,965,391	+		BT3114	0.62	-0.3
3,965,481	+		BT3114	0.65	-2.2
3,965,481	+		BT3114	0.65	-1.4
3,965,481	+		BT3114	0.65	-0.6
3,965,508	+				-0.0
3,965,528	+		BT3114	0.66	-0.5
3,965,529	-		BT3114	0.66	-1.5
3,965,529	-		BT3114	0.66	-0.8
3,965,641	-		BT3114	0.70	-0.0
3,965,641	-		BT3114	0.70	+0.1
3,965,641	-		BT3114	0.70	-1.4
3,965,642	+		BT3114	0.70	-1.0
3,965,643	-		BT3114	0.70	+0.2
3,965,722	-		BT3114	0.72	-3.9
3,965,743	-		BT3114	0.73	-1.5
3,965,834	+		BT3114	0.75	-0.6
3,965,835	-		BT3114	0.75	-1.3
3,965,835	-		BT3114	0.75	+0.5
3,965,837	-		BT3114	0.75	-1.0
3,965,842	-		BT3114	0.76	+0.2
3,965,850	+		BT3114	0.76	-0.8
3,965,854	+		BT3114	0.76	-1.6
3,965,854	+		BT3114	0.76	-1.1
3,965,893	+		BT3114	0.77	-1.2
3,965,993	+		BT3114	0.80	-0.9
3,965,994	-		BT3114	0.80	+0.2
3,965,994	-		BT3114	0.80	+0.7
3,965,995	+		BT3114	0.80	-1.3
3,965,996	-		BT3114	0.80	+2.4
3,965,996	-		BT3114	0.80	-0.4
3,965,996	-		BT3114	0.80	-2.2
3,966,007	+		BT3114	0.80	-0.6
3,966,007	+		BT3114	0.80	+0.5
3,966,033	-		BT3114	0.81	-1.1
3,966,050	-		BT3114	0.82	-1.6
3,966,050	-		BT3114	0.82	-0.6
3,966,070	+		BT3114	0.82	+1.5
3,966,141	-		BT3114	0.84	-1.4
3,966,141	-		BT3114	0.84	-0.0
3,966,141	-		BT3114	0.84	-2.2
3,966,168	+		BT3114	0.85	-2.4
3,966,169	-		BT3114	0.85	-1.4
3,966,174	+		BT3114	0.85	-0.3
3,966,174	+		BT3114	0.85	-2.0
3,966,175	-		BT3114	0.85	-3.2
3,966,301	+		BT3114	0.89	-1.9
3,966,302	-		BT3114	0.89	+0.4
3,966,326	+		BT3114	0.90	+3.5
3,966,405	+				-0.0
3,966,406	-				-2.4
3,966,462	+				-0.6
3,966,463	-				-1.8
3,966,466	+				-0.0
3,966,467	-				-1.8
3,966,468	+				-1.0
3,966,468	+				-0.0
3,966,469	-				+0.6
3,966,469	-				-0.3
3,966,469	-				-0.3
3,966,483	+				-2.0
3,966,497	+				-2.5
3,966,598	+				+1.3
3,966,622	-				-0.6
3,966,655	-				-1.3
3,966,655	-				+0.4
3,966,658	+				-1.6
3,966,658	+				-1.0
3,966,665	-				-0.6
3,966,669	-				-4.1
3,966,684	+				+1.2
3,966,688	+				-0.6
3,966,688	+				+0.8
3,966,689	-				-0.6
3,966,690	+				-2.1
3,966,708	-				+1.0
3,966,776	-				-2.1
3,966,809	+				-1.0
3,966,814	-				-0.8
3,966,836	+				-0.4
3,966,836	+				-1.4
3,966,837	-				+2.0
3,966,849	+				-0.1
3,966,849	+				+0.5
3,966,849	+				-0.8
3,966,908	+				-0.4
3,966,908	+				-2.1
3,966,936	+				-0.2
3,966,983	-				-1.2
3,966,993	-				+1.0
3,966,993	-				-1.4
3,966,995	+				-0.0
3,966,996	-				-0.3
3,967,009	-				-1.1
3,967,103	+				-1.7
3,967,107	+				-1.7
3,967,108	-				-1.4
3,967,307	+				+3.0
3,967,524	+		BT3115	0.12	-1.7
3,967,524	+		BT3115	0.12	-2.5
3,967,528	+		BT3115	0.12	-1.1
3,967,528	+		BT3115	0.12	-0.2
3,967,528	+		BT3115	0.12	-1.3
3,967,529	-		BT3115	0.12	-2.7
3,967,551	+		BT3115	0.13	+0.2