Experiment: Carbon source D-Glucose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_849 and Pf6N2E2_850 are separated by 282 nucleotides Pf6N2E2_850 and Pf6N2E2_851 are separated by 96 nucleotides Pf6N2E2_851 and Pf6N2E2_852 are separated by 227 nucleotides
Pf6N2E2_849 - Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77), at 993,711 to 995,078
_849
Pf6N2E2_850 - hypothetical protein, at 995,361 to 995,474
_850
Pf6N2E2_851 - Osmotically inducible protein Y precursor, at 995,571 to 996,218
_851
Pf6N2E2_852 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 996,446 to 998,728
_852
Position (kb) 995
996
997 Strain fitness (log2 ratio) -2
-1
0
1 at 994.607 kb on - strand, within Pf6N2E2_849 at 994.771 kb on + strand, within Pf6N2E2_849 at 994.771 kb on + strand, within Pf6N2E2_849 at 994.772 kb on - strand, within Pf6N2E2_849 at 994.772 kb on - strand, within Pf6N2E2_849 at 994.870 kb on - strand, within Pf6N2E2_849 at 994.873 kb on + strand, within Pf6N2E2_849 at 994.873 kb on + strand, within Pf6N2E2_849 at 994.874 kb on - strand, within Pf6N2E2_849 at 994.874 kb on - strand, within Pf6N2E2_849 at 995.018 kb on + strand at 995.019 kb on - strand at 995.029 kb on + strand at 995.030 kb on - strand at 995.041 kb on + strand at 995.125 kb on + strand at 995.125 kb on + strand at 995.125 kb on + strand at 995.125 kb on + strand at 995.126 kb on - strand at 995.126 kb on - strand at 995.126 kb on - strand at 995.215 kb on + strand at 995.219 kb on + strand at 995.219 kb on + strand at 995.219 kb on + strand at 995.220 kb on - strand at 995.225 kb on + strand at 995.226 kb on - strand at 995.290 kb on - strand at 995.297 kb on + strand at 995.323 kb on - strand at 995.362 kb on + strand at 995.739 kb on - strand, within Pf6N2E2_851 at 995.864 kb on - strand, within Pf6N2E2_851 at 995.928 kb on + strand, within Pf6N2E2_851 at 995.929 kb on - strand, within Pf6N2E2_851 at 995.929 kb on - strand, within Pf6N2E2_851 at 996.015 kb on + strand, within Pf6N2E2_851 at 996.015 kb on + strand, within Pf6N2E2_851 at 996.015 kb on + strand, within Pf6N2E2_851 at 996.016 kb on - strand, within Pf6N2E2_851 at 996.016 kb on - strand, within Pf6N2E2_851 at 996.016 kb on - strand at 996.192 kb on - strand at 996.197 kb on + strand at 996.267 kb on + strand at 996.305 kb on + strand at 996.306 kb on - strand at 996.340 kb on + strand at 996.431 kb on + strand at 996.446 kb on - strand at 996.699 kb on + strand, within Pf6N2E2_852 at 996.867 kb on + strand, within Pf6N2E2_852 at 996.868 kb on - strand, within Pf6N2E2_852 at 997.184 kb on + strand, within Pf6N2E2_852 at 997.185 kb on - strand, within Pf6N2E2_852 at 997.185 kb on - strand, within Pf6N2E2_852 at 997.185 kb on - strand, within Pf6N2E2_852 at 997.185 kb on - strand, within Pf6N2E2_852 at 997.185 kb on - strand, within Pf6N2E2_852
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 10 mM remove 994,607 - Pf6N2E2_849 0.65 +0.5 994,771 + Pf6N2E2_849 0.77 -0.8 994,771 + Pf6N2E2_849 0.77 +0.1 994,772 - Pf6N2E2_849 0.78 +0.5 994,772 - Pf6N2E2_849 0.78 -1.1 994,870 - Pf6N2E2_849 0.85 +0.1 994,873 + Pf6N2E2_849 0.85 +0.1 994,873 + Pf6N2E2_849 0.85 -1.1 994,874 - Pf6N2E2_849 0.85 -0.5 994,874 - Pf6N2E2_849 0.85 -0.4 995,018 + -0.1 995,019 - -1.1 995,029 + +0.5 995,030 - -1.1 995,041 + +0.5 995,125 + -0.5 995,125 + +0.5 995,125 + +0.2 995,125 + -0.1 995,126 - -0.7 995,126 - +0.5 995,126 - +0.4 995,215 + +0.2 995,219 + -1.5 995,219 + -0.7 995,219 + -1.1 995,220 - -1.4 995,225 + -0.4 995,226 - +1.1 995,290 - -0.5 995,297 + -1.5 995,323 - +0.6 995,362 + -0.2 995,739 - Pf6N2E2_851 0.26 -1.2 995,864 - Pf6N2E2_851 0.45 +0.6 995,928 + Pf6N2E2_851 0.55 +0.5 995,929 - Pf6N2E2_851 0.55 -0.5 995,929 - Pf6N2E2_851 0.55 -1.1 996,015 + Pf6N2E2_851 0.69 -2.3 996,015 + Pf6N2E2_851 0.69 +0.5 996,015 + Pf6N2E2_851 0.69 -2.1 996,016 - Pf6N2E2_851 0.69 +0.5 996,016 - Pf6N2E2_851 0.69 -0.8 996,016 - +0.5 996,192 - -0.1 996,197 + -0.3 996,267 + +0.5 996,305 + -0.4 996,306 - +0.5 996,340 + +1.6 996,431 + -0.0 996,446 - +0.5 996,699 + Pf6N2E2_852 0.11 -0.5 996,867 + Pf6N2E2_852 0.18 +0.2 996,868 - Pf6N2E2_852 0.18 +0.5 997,184 + Pf6N2E2_852 0.32 -1.1 997,185 - Pf6N2E2_852 0.32 -0.2 997,185 - Pf6N2E2_852 0.32 +0.8 997,185 - Pf6N2E2_852 0.32 +1.2 997,185 - Pf6N2E2_852 0.32 -1.5 997,185 - Pf6N2E2_852 0.32 -0.5
Or see this region's nucleotide sequence