Experiment: Carbon source D-Glucose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5342 and Pf6N2E2_5343 overlap by 4 nucleotides Pf6N2E2_5343 and Pf6N2E2_5344 are separated by 102 nucleotides Pf6N2E2_5344 and Pf6N2E2_5345 overlap by 1 nucleotides
Pf6N2E2_5342 - 21 kDa hemolysin precursor, at 6,136,430 to 6,137,008
_5342
Pf6N2E2_5343 - Phosphoheptose isomerase (EC 5.3.1.-), at 6,137,005 to 6,137,598
_5343
Pf6N2E2_5344 - Predicted endonuclease distantly related to archaeal Holliday junction resolvase, at 6,137,701 to 6,138,063
_5344
Pf6N2E2_5345 - LppC putative lipoprotein, at 6,138,063 to 6,139,874
_5345
Position (kb)
6137
6138
6139 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6136.704 kb on - strand, within Pf6N2E2_5342 at 6136.704 kb on - strand, within Pf6N2E2_5342 at 6136.704 kb on - strand, within Pf6N2E2_5342 at 6137.611 kb on - strand at 6137.611 kb on - strand at 6137.611 kb on - strand at 6137.611 kb on - strand at 6137.611 kb on - strand at 6137.611 kb on - strand at 6137.615 kb on - strand at 6137.814 kb on - strand, within Pf6N2E2_5344 at 6137.884 kb on - strand, within Pf6N2E2_5344 at 6137.912 kb on - strand, within Pf6N2E2_5344 at 6137.912 kb on - strand, within Pf6N2E2_5344 at 6137.915 kb on - strand, within Pf6N2E2_5344 at 6137.915 kb on - strand, within Pf6N2E2_5344 at 6137.915 kb on - strand, within Pf6N2E2_5344 at 6137.915 kb on - strand, within Pf6N2E2_5344 at 6137.915 kb on - strand, within Pf6N2E2_5344 at 6137.915 kb on - strand, within Pf6N2E2_5344 at 6137.920 kb on - strand, within Pf6N2E2_5344 at 6137.920 kb on - strand, within Pf6N2E2_5344 at 6138.132 kb on + strand at 6138.237 kb on + strand at 6138.237 kb on + strand at 6138.250 kb on + strand, within Pf6N2E2_5345 at 6138.250 kb on + strand, within Pf6N2E2_5345 at 6138.370 kb on + strand, within Pf6N2E2_5345 at 6138.371 kb on - strand, within Pf6N2E2_5345 at 6138.416 kb on - strand, within Pf6N2E2_5345 at 6138.436 kb on + strand, within Pf6N2E2_5345 at 6138.437 kb on - strand, within Pf6N2E2_5345 at 6138.847 kb on + strand, within Pf6N2E2_5345 at 6138.847 kb on + strand, within Pf6N2E2_5345 at 6138.847 kb on + strand, within Pf6N2E2_5345 at 6138.848 kb on - strand, within Pf6N2E2_5345 at 6138.848 kb on - strand, within Pf6N2E2_5345 at 6138.848 kb on - strand, within Pf6N2E2_5345 at 6138.996 kb on + strand, within Pf6N2E2_5345 at 6138.997 kb on + strand, within Pf6N2E2_5345 at 6138.997 kb on + strand, within Pf6N2E2_5345 at 6138.998 kb on - strand, within Pf6N2E2_5345 at 6139.043 kb on - strand, within Pf6N2E2_5345 at 6139.043 kb on - strand, within Pf6N2E2_5345
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 10 mM remove 6,136,704 - Pf6N2E2_5342 0.47 +1.6 6,136,704 - Pf6N2E2_5342 0.47 +1.2 6,136,704 - Pf6N2E2_5342 0.47 +1.2 6,137,611 - -0.7 6,137,611 - +0.6 6,137,611 - -2.1 6,137,611 - +0.2 6,137,611 - -0.1 6,137,611 - +0.2 6,137,615 - +1.2 6,137,814 - Pf6N2E2_5344 0.31 -1.4 6,137,884 - Pf6N2E2_5344 0.50 -0.8 6,137,912 - Pf6N2E2_5344 0.58 -0.4 6,137,912 - Pf6N2E2_5344 0.58 -1.9 6,137,915 - Pf6N2E2_5344 0.59 -1.2 6,137,915 - Pf6N2E2_5344 0.59 +1.2 6,137,915 - Pf6N2E2_5344 0.59 +3.0 6,137,915 - Pf6N2E2_5344 0.59 -0.2 6,137,915 - Pf6N2E2_5344 0.59 +0.5 6,137,915 - Pf6N2E2_5344 0.59 +0.2 6,137,920 - Pf6N2E2_5344 0.60 +1.2 6,137,920 - Pf6N2E2_5344 0.60 -0.2 6,138,132 + +0.2 6,138,237 + -1.0 6,138,237 + -0.1 6,138,250 + Pf6N2E2_5345 0.10 +0.4 6,138,250 + Pf6N2E2_5345 0.10 +0.1 6,138,370 + Pf6N2E2_5345 0.17 -2.1 6,138,371 - Pf6N2E2_5345 0.17 +1.2 6,138,416 - Pf6N2E2_5345 0.19 +0.1 6,138,436 + Pf6N2E2_5345 0.21 +1.0 6,138,437 - Pf6N2E2_5345 0.21 +0.9 6,138,847 + Pf6N2E2_5345 0.43 -0.6 6,138,847 + Pf6N2E2_5345 0.43 +0.4 6,138,847 + Pf6N2E2_5345 0.43 +0.3 6,138,848 - Pf6N2E2_5345 0.43 -0.5 6,138,848 - Pf6N2E2_5345 0.43 +1.2 6,138,848 - Pf6N2E2_5345 0.43 -0.2 6,138,996 + Pf6N2E2_5345 0.51 +1.2 6,138,997 + Pf6N2E2_5345 0.52 +0.6 6,138,997 + Pf6N2E2_5345 0.52 -0.4 6,138,998 - Pf6N2E2_5345 0.52 +0.1 6,139,043 - Pf6N2E2_5345 0.54 +0.2 6,139,043 - Pf6N2E2_5345 0.54 +1.2
Or see this region's nucleotide sequence