Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_626 and Pf6N2E2_627 are separated by 791 nucleotides Pf6N2E2_627 and Pf6N2E2_628 are separated by 14 nucleotides
Pf6N2E2_626 - hypothetical protein, at 713,074 to 713,442
_626
Pf6N2E2_627 - 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43), at 714,234 to 715,211
_627
Pf6N2E2_628 - 2-ketogluconate transporter, at 715,226 to 716,524
_628
Position (kb) 714
715
716 Strain fitness (log2 ratio) -2
-1
0
1
2 at 713.440 kb on + strand at 713.440 kb on + strand at 713.440 kb on + strand at 713.441 kb on - strand at 713.473 kb on + strand at 713.473 kb on + strand at 713.474 kb on - strand at 713.531 kb on + strand at 713.542 kb on + strand at 713.542 kb on + strand at 713.542 kb on + strand at 713.542 kb on + strand at 713.542 kb on + strand at 713.542 kb on + strand at 713.542 kb on + strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.543 kb on - strand at 713.660 kb on + strand at 713.661 kb on - strand at 713.661 kb on - strand at 713.690 kb on + strand at 713.690 kb on + strand at 713.691 kb on - strand at 713.691 kb on - strand at 713.691 kb on - strand at 713.713 kb on + strand at 713.713 kb on + strand at 713.714 kb on - strand at 713.715 kb on + strand at 713.715 kb on + strand at 713.716 kb on - strand at 713.810 kb on + strand at 713.810 kb on + strand at 713.814 kb on + strand at 713.814 kb on + strand at 713.814 kb on + strand at 713.814 kb on + strand at 713.814 kb on + strand at 713.814 kb on + strand at 713.814 kb on + strand at 713.815 kb on - strand at 713.815 kb on - strand at 713.815 kb on - strand at 713.815 kb on - strand at 713.815 kb on - strand at 713.815 kb on - strand at 713.837 kb on + strand at 713.838 kb on - strand at 713.838 kb on - strand at 713.847 kb on - strand at 713.854 kb on + strand at 713.854 kb on + strand at 713.854 kb on + strand at 713.855 kb on - strand at 713.939 kb on + strand at 713.939 kb on + strand at 713.940 kb on - strand at 713.940 kb on - strand at 713.944 kb on + strand at 713.958 kb on + strand at 713.958 kb on + strand at 713.959 kb on - strand at 713.959 kb on - strand at 713.960 kb on + strand at 713.961 kb on - strand at 713.961 kb on - strand at 713.961 kb on - strand at 714.231 kb on + strand at 714.231 kb on + strand at 714.232 kb on - strand at 714.516 kb on - strand, within Pf6N2E2_627 at 714.516 kb on - strand, within Pf6N2E2_627 at 714.640 kb on + strand, within Pf6N2E2_627 at 714.691 kb on + strand, within Pf6N2E2_627 at 714.691 kb on + strand, within Pf6N2E2_627 at 714.692 kb on - strand, within Pf6N2E2_627 at 714.692 kb on - strand, within Pf6N2E2_627 at 714.961 kb on + strand, within Pf6N2E2_627 at 714.973 kb on + strand, within Pf6N2E2_627 at 714.973 kb on + strand, within Pf6N2E2_627 at 714.974 kb on - strand, within Pf6N2E2_627 at 714.974 kb on - strand, within Pf6N2E2_627 at 714.974 kb on - strand, within Pf6N2E2_627 at 714.974 kb on - strand, within Pf6N2E2_627 at 715.189 kb on + strand at 715.189 kb on + strand at 715.190 kb on - strand at 715.190 kb on - strand at 715.384 kb on - strand, within Pf6N2E2_628 at 715.512 kb on + strand, within Pf6N2E2_628 at 715.512 kb on + strand, within Pf6N2E2_628 at 715.513 kb on - strand, within Pf6N2E2_628 at 715.513 kb on - strand, within Pf6N2E2_628 at 715.513 kb on - strand, within Pf6N2E2_628 at 715.513 kb on - strand, within Pf6N2E2_628 at 715.513 kb on - strand, within Pf6N2E2_628 at 715.513 kb on - strand, within Pf6N2E2_628 at 715.513 kb on - strand, within Pf6N2E2_628 at 715.513 kb on - strand, within Pf6N2E2_628 at 715.545 kb on + strand, within Pf6N2E2_628 at 715.545 kb on + strand, within Pf6N2E2_628 at 715.578 kb on + strand, within Pf6N2E2_628 at 715.579 kb on - strand, within Pf6N2E2_628 at 715.587 kb on + strand, within Pf6N2E2_628 at 715.588 kb on - strand, within Pf6N2E2_628 at 715.695 kb on + strand, within Pf6N2E2_628 at 715.854 kb on + strand, within Pf6N2E2_628 at 716.149 kb on - strand, within Pf6N2E2_628 at 716.149 kb on - strand, within Pf6N2E2_628 at 716.149 kb on - strand, within Pf6N2E2_628
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 713,440 + -2.1 713,440 + +0.4 713,440 + -0.1 713,441 - -0.0 713,473 + +0.2 713,473 + -1.5 713,474 - -0.1 713,531 + -0.3 713,542 + +0.9 713,542 + -1.5 713,542 + -0.5 713,542 + +0.7 713,542 + -1.7 713,542 + +0.9 713,542 + +1.1 713,543 - -0.7 713,543 - +0.9 713,543 - +0.5 713,543 - +0.3 713,543 - -0.2 713,543 - +0.3 713,543 - -1.5 713,543 - -0.1 713,543 - -0.6 713,543 - +0.9 713,543 - +1.3 713,543 - +0.9 713,660 + -0.3 713,661 - +0.3 713,661 - +0.5 713,690 + +2.2 713,690 + -1.5 713,691 - +0.0 713,691 - -0.3 713,691 - -0.1 713,713 + +0.3 713,713 + -0.7 713,714 - -0.1 713,715 + -1.5 713,715 + -0.1 713,716 - +0.9 713,810 + +0.9 713,810 + -0.7 713,814 + +1.4 713,814 + -0.7 713,814 + +0.0 713,814 + -0.8 713,814 + +1.4 713,814 + -0.7 713,814 + +0.4 713,815 - -0.0 713,815 - +0.9 713,815 - -1.7 713,815 - -0.1 713,815 - -0.1 713,815 - +0.9 713,837 + -0.6 713,838 - +0.3 713,838 - -0.5 713,847 - +1.0 713,854 + -0.1 713,854 + +0.5 713,854 + +0.0 713,855 - +0.6 713,939 + +0.4 713,939 + -2.6 713,940 - -0.1 713,940 - -1.1 713,944 + +0.1 713,958 + +0.1 713,958 + -0.1 713,959 - -0.1 713,959 - -1.1 713,960 + -0.5 713,961 - -0.1 713,961 - +0.0 713,961 - -1.1 714,231 + +0.5 714,231 + +0.0 714,232 - -1.1 714,516 - Pf6N2E2_627 0.29 +0.9 714,516 - Pf6N2E2_627 0.29 +0.7 714,640 + Pf6N2E2_627 0.42 -1.1 714,691 + Pf6N2E2_627 0.47 +0.3 714,691 + Pf6N2E2_627 0.47 -0.9 714,692 - Pf6N2E2_627 0.47 -0.1 714,692 - Pf6N2E2_627 0.47 -0.0 714,961 + Pf6N2E2_627 0.74 +0.9 714,973 + Pf6N2E2_627 0.76 -0.1 714,973 + Pf6N2E2_627 0.76 -0.0 714,974 - Pf6N2E2_627 0.76 +0.3 714,974 - Pf6N2E2_627 0.76 +1.6 714,974 - Pf6N2E2_627 0.76 +0.2 714,974 - Pf6N2E2_627 0.76 +0.7 715,189 + +1.4 715,189 + -0.1 715,190 - +0.9 715,190 - +0.9 715,384 - Pf6N2E2_628 0.12 +0.9 715,512 + Pf6N2E2_628 0.22 +0.6 715,512 + Pf6N2E2_628 0.22 -0.1 715,513 - Pf6N2E2_628 0.22 +0.3 715,513 - Pf6N2E2_628 0.22 +0.1 715,513 - Pf6N2E2_628 0.22 +0.2 715,513 - Pf6N2E2_628 0.22 -0.4 715,513 - Pf6N2E2_628 0.22 +0.9 715,513 - Pf6N2E2_628 0.22 -0.5 715,513 - Pf6N2E2_628 0.22 +1.3 715,513 - Pf6N2E2_628 0.22 +0.3 715,545 + Pf6N2E2_628 0.25 -1.1 715,545 + Pf6N2E2_628 0.25 -1.7 715,578 + Pf6N2E2_628 0.27 -2.2 715,579 - Pf6N2E2_628 0.27 +0.5 715,587 + Pf6N2E2_628 0.28 +0.1 715,588 - Pf6N2E2_628 0.28 -1.1 715,695 + Pf6N2E2_628 0.36 -1.7 715,854 + Pf6N2E2_628 0.48 -0.1 716,149 - Pf6N2E2_628 0.71 +0.1 716,149 - Pf6N2E2_628 0.71 -0.4 716,149 - Pf6N2E2_628 0.71 +1.5
Or see this region's nucleotide sequence