Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2012

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
2,394,003	+				-0.6
2,394,004	-				-3.1
2,394,004	-				+1.0
2,394,004	-				+0.0
2,394,004	-				+0.7
2,394,004	-				+1.0
2,394,043	+				+1.0
2,394,043	+				-1.6
2,394,043	+				-0.8
2,394,044	-				+1.4
2,394,044	-				-0.3
2,394,044	-				+0.3
2,394,044	-				+0.7
2,394,047	+				+1.0
2,394,047	+				+1.0
2,394,047	+				+0.8
2,394,047	+				+1.2
2,394,047	+				+0.0
2,394,047	+				+0.3
2,394,047	+				+0.0
2,394,047	+				-0.3
2,394,047	+				+0.6
2,394,047	+				+1.7
2,394,048	-				+0.0
2,394,048	-				+1.0
2,394,048	-				+0.0
2,394,048	-				+0.1
2,394,139	+				-0.1
2,394,158	-				+0.0
2,394,158	-				+0.8
2,394,203	+				-1.1
2,394,203	+				+0.1
2,394,203	+				+0.0
2,394,204	-				-1.3
2,394,357	+				+0.0
2,394,357	+				+0.0
2,394,367	+				-0.4
2,394,367	+				+0.7
2,394,368	-				+1.0
2,394,368	-				-0.7
2,394,368	-				+1.0
2,394,368	-				+0.0
2,394,368	-				-0.9
2,394,385	+				-0.6
2,394,409	+				+0.6
2,394,410	-				+0.0
2,394,431	-				-2.0
2,394,431	-				+1.0
2,394,468	-				-0.7
2,394,468	-				-0.2
2,394,589	+		Pf6N2E2_2011	0.34	+1.0
2,394,590	-		Pf6N2E2_2011	0.35	+0.3
2,394,590	-		Pf6N2E2_2011	0.35	-1.9
2,394,590	-		Pf6N2E2_2011	0.35	+1.0
2,394,590	-		Pf6N2E2_2011	0.35	-1.0
2,394,590	-		Pf6N2E2_2011	0.35	-1.6
2,394,590	-		Pf6N2E2_2011	0.35	+0.8
2,394,671	+		Pf6N2E2_2011	0.76	-1.0
2,394,671	+		Pf6N2E2_2011	0.76	+0.4
2,394,672	-		Pf6N2E2_2011	0.77	-0.2
2,394,672	-		Pf6N2E2_2011	0.77	+0.3
2,394,672	-		Pf6N2E2_2011	0.77	+0.4
2,394,672	-		Pf6N2E2_2011	0.77	+0.0
2,394,672	-		Pf6N2E2_2011	0.77	-0.6
2,394,690	+		Pf6N2E2_2011	0.86	+1.0
2,394,691	-		Pf6N2E2_2011	0.87	+1.0
2,394,691	-		Pf6N2E2_2011	0.87	+0.0
2,394,691	-		Pf6N2E2_2011	0.87	+0.1
2,394,732	-				+0.0
2,394,750	+				-0.6
2,394,806	-				+0.1
2,394,968	+				+0.0
2,394,980	-				+1.0
2,394,980	-				-0.0
2,395,004	-				+1.0
2,395,004	-				+0.0
2,395,031	+		Pf6N2E2_2012	0.22	-1.3
2,395,031	+		Pf6N2E2_2012	0.22	+0.0
2,395,031	+		Pf6N2E2_2012	0.22	+0.4
2,395,032	-		Pf6N2E2_2012	0.23	+1.0
2,395,048	+		Pf6N2E2_2012	0.35	-1.0
2,395,322	+				-0.6
2,395,322	+				+0.9
2,395,326	-				+1.0
2,395,338	-				+1.0
2,395,367	+				+1.3
2,395,398	+				+1.0
2,395,398	+				+1.0
2,395,398	+				+0.0
2,395,399	-				+1.0
2,395,403	+				-0.2
2,395,403	+				+0.0
2,395,403	+				+0.0
2,395,403	+				-0.6
2,395,414	+				+1.0
2,395,484	+				-0.7
2,395,538	+				+0.0
2,395,554	-				+0.0
2,395,590	+				+1.0
2,395,590	+				+0.0
2,395,591	-				+1.0
2,395,632	+				+1.0
2,395,632	+				-0.6
2,395,632	+				-1.3
2,395,632	+				+0.0
2,395,632	+				+0.0
2,395,632	+				-0.6
2,395,632	+				-0.6
2,395,632	+				+0.6
2,395,633	-				+1.0
2,395,694	+		Pf6N2E2_2013	0.12	+0.1
2,395,838	+				+1.0
2,395,838	+				-1.6
2,395,839	-				-1.0
2,395,839	-				+0.0
2,395,873	+				+0.6
2,395,874	-				+1.6
2,395,874	-				-0.4
2,395,874	-				+0.0
2,395,874	-				+1.0
2,395,912	-				-0.6
2,395,988	-		Pf6N2E2_2014	0.11	-0.6
2,395,988	-		Pf6N2E2_2014	0.11	-0.1
2,396,097	-		Pf6N2E2_2014	0.20	-0.6
2,396,119	+		Pf6N2E2_2014	0.22	-0.6