Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1954

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
2,317,690	-		Pf6N2E2_1952	0.68	-0.0
2,317,717	-		Pf6N2E2_1952	0.71	+1.0
2,317,717	-		Pf6N2E2_1952	0.71	-0.5
2,317,717	-		Pf6N2E2_1952	0.71	+0.1
2,317,885	+		Pf6N2E2_1952	0.89	-0.2
2,317,885	+		Pf6N2E2_1952	0.89	-0.4
2,317,885	+		Pf6N2E2_1952	0.89	+0.1
2,317,885	+		Pf6N2E2_1952	0.89	-0.6
2,318,007	+				-0.6
2,318,007	+				+1.0
2,318,008	-				-0.4
2,318,008	-				-0.4
2,318,132	+		Pf6N2E2_1953	0.14	+1.0
2,318,132	+		Pf6N2E2_1953	0.14	-0.1
2,318,132	+		Pf6N2E2_1953	0.14	+0.8
2,318,132	+		Pf6N2E2_1953	0.14	-1.8
2,318,132	+		Pf6N2E2_1953	0.14	-0.6
2,318,133	-		Pf6N2E2_1953	0.15	+2.6
2,318,133	-		Pf6N2E2_1953	0.15	+1.0
2,318,194	+		Pf6N2E2_1953	0.32	-1.8
2,318,226	+		Pf6N2E2_1953	0.41	+0.2
2,318,226	+		Pf6N2E2_1953	0.41	-0.0
2,318,227	-		Pf6N2E2_1953	0.41	+1.0
2,318,227	-		Pf6N2E2_1953	0.41	-0.0
2,318,227	-		Pf6N2E2_1953	0.41	+0.2
2,318,366	+		Pf6N2E2_1953	0.81	+1.0
2,318,434	+				-0.2
2,318,555	+				+1.0
2,318,583	+				+1.0
2,318,656	+				-0.0
2,318,659	+				+0.7
2,318,660	-				+1.0
2,318,755	+		Pf6N2E2_1954	0.18	+1.0
2,318,755	+		Pf6N2E2_1954	0.18	+0.8
2,318,767	-		Pf6N2E2_1954	0.19	-0.6
2,318,873	-		Pf6N2E2_1954	0.31	-0.0
2,318,873	-		Pf6N2E2_1954	0.31	+1.7
2,318,906	+		Pf6N2E2_1954	0.35	-0.0
2,318,906	+		Pf6N2E2_1954	0.35	-0.0
2,318,907	-		Pf6N2E2_1954	0.35	-2.3
2,318,920	-		Pf6N2E2_1954	0.37	-0.0
2,319,091	+		Pf6N2E2_1954	0.56	+1.0
2,319,189	-		Pf6N2E2_1954	0.67	+1.0
2,319,191	+		Pf6N2E2_1954	0.67	-0.0
2,319,192	-		Pf6N2E2_1954	0.67	+0.6
2,319,279	+		Pf6N2E2_1954	0.77	-0.0
2,319,297	+		Pf6N2E2_1954	0.79	-1.0
2,319,302	+		Pf6N2E2_1954	0.80	-0.0
2,319,302	+		Pf6N2E2_1954	0.80	-0.6
2,319,303	-		Pf6N2E2_1954	0.80	-1.8
2,319,303	-		Pf6N2E2_1954	0.80	-1.2
2,319,303	-		Pf6N2E2_1954	0.80	+1.0
2,319,309	+		Pf6N2E2_1954	0.80	-0.0
2,319,310	-		Pf6N2E2_1954	0.81	-0.6
2,319,330	-		Pf6N2E2_1954	0.83	-0.6
2,319,399	+				-0.6
2,319,399	+				+2.0
2,319,403	-				+1.0
2,319,453	+				-0.7
2,319,453	+				-0.0
2,319,511	-				-0.0
2,319,521	-				+1.3
2,319,569	+				+0.2
2,319,570	-				+0.4
2,319,570	-				-0.3
2,319,570	-				+1.0
2,319,574	+				+0.1
2,319,575	-				-0.0
2,319,601	+				+0.2
2,319,601	+				-0.0
2,319,603	+				-0.0
2,319,603	+				-1.1
2,319,603	+				+0.5
2,319,678	-				-0.4
2,319,678	-				+2.0
2,319,818	+				-0.5
2,319,818	+				+0.4
2,319,818	+				-1.0
2,319,819	-				-0.6
2,320,099	+		Pf6N2E2_1955	0.23	+1.0
2,320,099	+		Pf6N2E2_1955	0.23	+2.2
2,320,100	-		Pf6N2E2_1955	0.23	+1.0
2,320,122	+		Pf6N2E2_1955	0.27	-0.6
2,320,122	+		Pf6N2E2_1955	0.27	-0.0
2,320,123	-		Pf6N2E2_1955	0.27	-0.0
2,320,123	-		Pf6N2E2_1955	0.27	-1.5
2,320,124	+		Pf6N2E2_1955	0.27	+0.5
2,320,124	+		Pf6N2E2_1955	0.27	+0.6
2,320,124	+		Pf6N2E2_1955	0.27	+0.1
2,320,124	+		Pf6N2E2_1955	0.27	+1.0
2,320,124	+		Pf6N2E2_1955	0.27	+1.0
2,320,124	+		Pf6N2E2_1955	0.27	-0.0
2,320,124	+		Pf6N2E2_1955	0.27	-0.6
2,320,125	-		Pf6N2E2_1955	0.28	-0.5
2,320,125	-		Pf6N2E2_1955	0.28	-0.7
2,320,125	-		Pf6N2E2_1955	0.28	+1.0
2,320,125	-		Pf6N2E2_1955	0.28	+0.4
2,320,125	-		Pf6N2E2_1955	0.28	+1.5
2,320,164	+		Pf6N2E2_1955	0.34	+1.2
2,320,164	+		Pf6N2E2_1955	0.34	+1.0
2,320,165	-		Pf6N2E2_1955	0.34	+0.2
2,320,165	-		Pf6N2E2_1955	0.34	-0.8
2,320,165	-		Pf6N2E2_1955	0.34	-0.4
2,320,185	-		Pf6N2E2_1955	0.38	-0.0
2,320,246	-		Pf6N2E2_1955	0.48	-0.6
2,320,316	+		Pf6N2E2_1955	0.59	+1.0
2,320,317	-		Pf6N2E2_1955	0.59	-0.3