Experiment: Vogels_fungal_media 0.1X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09845 and BWI76_RS09850 are separated by 183 nucleotides BWI76_RS09850 and BWI76_RS09855 overlap by 64 nucleotides BWI76_RS09855 and BWI76_RS09860 are separated by 149 nucleotides BWI76_RS09860 and BWI76_RS09865 are separated by 13 nucleotides
BWI76_RS09845: BWI76_RS09845 - chromosome partition protein MukB, at 2,064,817 to 2,069,265
_RS09845
BWI76_RS09850: BWI76_RS09850 - L,D-transpeptidase, at 2,069,449 to 2,071,242
_RS09850
BWI76_RS09855: BWI76_RS09855 - hypothetical protein, at 2,071,179 to 2,071,393
_RS09855
BWI76_RS09860: BWI76_RS09860 - hypothetical protein, at 2,071,543 to 2,072,094
_RS09860
BWI76_RS09865: BWI76_RS09865 - MBL fold hydrolase, at 2,072,108 to 2,072,755
_RS09865
Position (kb)
2069
2070
2071
2072 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2069.448 kb on - strand at 2069.544 kb on + strand at 2069.804 kb on + strand, within BWI76_RS09850 at 2069.872 kb on - strand, within BWI76_RS09850 at 2069.985 kb on + strand, within BWI76_RS09850 at 2070.054 kb on + strand, within BWI76_RS09850 at 2070.075 kb on + strand, within BWI76_RS09850 at 2070.386 kb on + strand, within BWI76_RS09850 at 2070.725 kb on - strand, within BWI76_RS09850 at 2070.731 kb on + strand, within BWI76_RS09850 at 2070.739 kb on - strand, within BWI76_RS09850 at 2070.907 kb on - strand, within BWI76_RS09850 at 2070.953 kb on - strand, within BWI76_RS09850 at 2070.959 kb on - strand, within BWI76_RS09850 at 2071.000 kb on + strand, within BWI76_RS09850 at 2071.003 kb on - strand, within BWI76_RS09850 at 2071.038 kb on - strand, within BWI76_RS09850 at 2071.332 kb on + strand, within BWI76_RS09855 at 2071.433 kb on + strand at 2071.455 kb on + strand at 2071.455 kb on + strand at 2071.478 kb on + strand at 2071.818 kb on + strand, within BWI76_RS09860 at 2071.818 kb on + strand, within BWI76_RS09860 at 2071.826 kb on - strand, within BWI76_RS09860 at 2071.826 kb on - strand, within BWI76_RS09860 at 2072.025 kb on - strand, within BWI76_RS09860
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.1X remove 2,069,448 - -0.3 2,069,544 + -0.8 2,069,804 + BWI76_RS09850 0.20 -1.2 2,069,872 - BWI76_RS09850 0.24 -0.3 2,069,985 + BWI76_RS09850 0.30 -0.6 2,070,054 + BWI76_RS09850 0.34 +1.2 2,070,075 + BWI76_RS09850 0.35 -2.9 2,070,386 + BWI76_RS09850 0.52 -0.6 2,070,725 - BWI76_RS09850 0.71 -0.3 2,070,731 + BWI76_RS09850 0.71 -0.5 2,070,739 - BWI76_RS09850 0.72 -0.5 2,070,907 - BWI76_RS09850 0.81 -0.9 2,070,953 - BWI76_RS09850 0.84 -0.7 2,070,959 - BWI76_RS09850 0.84 -0.8 2,071,000 + BWI76_RS09850 0.86 -0.0 2,071,003 - BWI76_RS09850 0.87 -2.7 2,071,038 - BWI76_RS09850 0.89 -0.9 2,071,332 + BWI76_RS09855 0.71 +0.2 2,071,433 + +0.8 2,071,455 + -0.1 2,071,455 + -0.4 2,071,478 + -0.5 2,071,818 + BWI76_RS09860 0.50 -0.6 2,071,818 + BWI76_RS09860 0.50 -4.4 2,071,826 - BWI76_RS09860 0.51 -1.4 2,071,826 - BWI76_RS09860 0.51 -0.7 2,072,025 - BWI76_RS09860 0.87 +0.2
Or see this region's nucleotide sequence