Experiment: Carbon source D,L-Lactate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_541 and Pf6N2E2_542 are separated by 748 nucleotides Pf6N2E2_542 and Pf6N2E2_543 are separated by 450 nucleotides
Pf6N2E2_541 - Transcriptional regulator, Cro/CI family, at 609,018 to 609,581
_541
Pf6N2E2_542 - hypothetical protein, at 610,330 to 611,763
_542
Pf6N2E2_543 - Myo-inositol 2-dehydrogenase (EC 1.1.1.18), at 612,214 to 613,329
_543
Position (kb) 610
611
612 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 609.387 kb on + strand, within Pf6N2E2_541 at 609.388 kb on - strand, within Pf6N2E2_541 at 609.429 kb on + strand, within Pf6N2E2_541 at 609.429 kb on + strand, within Pf6N2E2_541 at 609.429 kb on + strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.430 kb on - strand, within Pf6N2E2_541 at 609.562 kb on + strand at 609.629 kb on + strand at 609.629 kb on + strand at 609.630 kb on - strand at 609.650 kb on + strand at 609.650 kb on + strand at 609.651 kb on - strand at 609.651 kb on - strand at 609.686 kb on + strand at 609.687 kb on - strand at 609.710 kb on - strand at 609.747 kb on + strand at 609.747 kb on + strand at 609.748 kb on - strand at 609.752 kb on + strand at 609.753 kb on - strand at 609.816 kb on + strand at 609.980 kb on + strand at 609.980 kb on + strand at 609.981 kb on - strand at 609.981 kb on - strand at 609.991 kb on - strand at 610.030 kb on + strand at 610.033 kb on - strand at 610.035 kb on + strand at 610.035 kb on + strand at 610.039 kb on + strand at 610.039 kb on + strand at 610.039 kb on + strand at 610.040 kb on - strand at 610.089 kb on + strand at 610.093 kb on + strand at 610.206 kb on + strand at 610.206 kb on + strand at 610.206 kb on + strand at 610.210 kb on + strand at 610.210 kb on + strand at 610.210 kb on + strand at 610.237 kb on + strand at 610.237 kb on + strand at 610.493 kb on - strand, within Pf6N2E2_542 at 610.678 kb on + strand, within Pf6N2E2_542 at 610.678 kb on + strand, within Pf6N2E2_542 at 610.678 kb on + strand, within Pf6N2E2_542 at 610.678 kb on + strand, within Pf6N2E2_542 at 610.679 kb on - strand, within Pf6N2E2_542 at 610.817 kb on + strand, within Pf6N2E2_542 at 610.817 kb on + strand, within Pf6N2E2_542 at 610.817 kb on + strand, within Pf6N2E2_542 at 610.818 kb on - strand, within Pf6N2E2_542 at 611.282 kb on + strand, within Pf6N2E2_542 at 611.282 kb on + strand, within Pf6N2E2_542 at 611.282 kb on + strand, within Pf6N2E2_542 at 611.282 kb on + strand, within Pf6N2E2_542 at 611.282 kb on + strand, within Pf6N2E2_542 at 611.282 kb on + strand, within Pf6N2E2_542 at 611.283 kb on - strand, within Pf6N2E2_542 at 611.283 kb on - strand, within Pf6N2E2_542 at 611.283 kb on - strand, within Pf6N2E2_542 at 611.283 kb on - strand, within Pf6N2E2_542 at 611.504 kb on - strand, within Pf6N2E2_542 at 611.811 kb on + strand at 611.811 kb on + strand at 612.215 kb on + strand at 612.216 kb on - strand at 612.217 kb on + strand at 612.217 kb on + strand at 612.217 kb on + strand at 612.217 kb on + strand at 612.217 kb on + strand at 612.217 kb on + strand at 612.217 kb on + strand at 612.217 kb on + strand at 612.218 kb on - strand at 612.218 kb on - strand at 612.218 kb on - strand at 612.218 kb on - strand at 612.218 kb on - strand at 612.218 kb on - strand at 612.378 kb on - strand, within Pf6N2E2_543 at 612.378 kb on - strand, within Pf6N2E2_543 at 612.648 kb on + strand, within Pf6N2E2_543 at 612.648 kb on + strand, within Pf6N2E2_543 at 612.648 kb on + strand, within Pf6N2E2_543 at 612.648 kb on + strand, within Pf6N2E2_543 at 612.648 kb on + strand, within Pf6N2E2_543 at 612.648 kb on + strand, within Pf6N2E2_543 at 612.648 kb on + strand, within Pf6N2E2_543 at 612.649 kb on - strand, within Pf6N2E2_543 at 612.649 kb on - strand, within Pf6N2E2_543 at 612.649 kb on - strand, within Pf6N2E2_543
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D,L-Lactate 10 mM remove 609,387 + Pf6N2E2_541 0.65 +0.6 609,388 - Pf6N2E2_541 0.66 +0.1 609,429 + Pf6N2E2_541 0.73 -0.1 609,429 + Pf6N2E2_541 0.73 -2.1 609,429 + Pf6N2E2_541 0.73 -0.3 609,430 - Pf6N2E2_541 0.73 -0.3 609,430 - Pf6N2E2_541 0.73 -1.6 609,430 - Pf6N2E2_541 0.73 -0.9 609,430 - Pf6N2E2_541 0.73 +0.7 609,430 - Pf6N2E2_541 0.73 +2.0 609,430 - Pf6N2E2_541 0.73 +0.2 609,430 - Pf6N2E2_541 0.73 +0.4 609,430 - Pf6N2E2_541 0.73 +2.7 609,430 - Pf6N2E2_541 0.73 -1.1 609,562 + +0.7 609,629 + -0.3 609,629 + +0.4 609,630 - -0.3 609,650 + -0.3 609,650 + -0.3 609,651 - -0.9 609,651 - +1.0 609,686 + +2.2 609,687 - -1.4 609,710 - -0.6 609,747 + -0.9 609,747 + +0.1 609,748 - -0.9 609,752 + -1.4 609,753 - +0.7 609,816 + -0.3 609,980 + -1.4 609,980 + +0.7 609,981 - -1.3 609,981 - -0.0 609,991 - -0.3 610,030 + -0.3 610,033 - +0.7 610,035 + -0.9 610,035 + +0.0 610,039 + -1.6 610,039 + +0.7 610,039 + -1.3 610,040 - -0.3 610,089 + +0.1 610,093 + -0.3 610,206 + -1.3 610,206 + +0.9 610,206 + -1.6 610,210 + +0.5 610,210 + -0.2 610,210 + +0.7 610,237 + +0.7 610,237 + +0.7 610,493 - Pf6N2E2_542 0.11 +0.6 610,678 + Pf6N2E2_542 0.24 +0.7 610,678 + Pf6N2E2_542 0.24 +0.7 610,678 + Pf6N2E2_542 0.24 -0.3 610,678 + Pf6N2E2_542 0.24 -0.9 610,679 - Pf6N2E2_542 0.24 +0.7 610,817 + Pf6N2E2_542 0.34 +0.7 610,817 + Pf6N2E2_542 0.34 -0.4 610,817 + Pf6N2E2_542 0.34 -2.1 610,818 - Pf6N2E2_542 0.34 -0.4 611,282 + Pf6N2E2_542 0.66 -1.5 611,282 + Pf6N2E2_542 0.66 -0.1 611,282 + Pf6N2E2_542 0.66 -0.6 611,282 + Pf6N2E2_542 0.66 -3.1 611,282 + Pf6N2E2_542 0.66 -1.0 611,282 + Pf6N2E2_542 0.66 +0.2 611,283 - Pf6N2E2_542 0.66 -0.6 611,283 - Pf6N2E2_542 0.66 -0.6 611,283 - Pf6N2E2_542 0.66 -0.7 611,283 - Pf6N2E2_542 0.66 +0.2 611,504 - Pf6N2E2_542 0.82 -1.9 611,811 + +0.8 611,811 + -1.7 612,215 + +0.7 612,216 - -0.7 612,217 + +0.3 612,217 + -1.3 612,217 + -1.3 612,217 + +0.7 612,217 + -1.3 612,217 + -0.3 612,217 + -0.9 612,217 + -2.9 612,218 - +0.5 612,218 - -3.2 612,218 - +0.2 612,218 - -1.4 612,218 - +0.5 612,218 - -1.3 612,378 - Pf6N2E2_543 0.15 -0.9 612,378 - Pf6N2E2_543 0.15 +1.7 612,648 + Pf6N2E2_543 0.39 -0.3 612,648 + Pf6N2E2_543 0.39 -0.3 612,648 + Pf6N2E2_543 0.39 -0.3 612,648 + Pf6N2E2_543 0.39 -1.9 612,648 + Pf6N2E2_543 0.39 -0.2 612,648 + Pf6N2E2_543 0.39 -0.9 612,648 + Pf6N2E2_543 0.39 +0.7 612,649 - Pf6N2E2_543 0.39 -0.9 612,649 - Pf6N2E2_543 0.39 +0.4 612,649 - Pf6N2E2_543 0.39 -1.1
Or see this region's nucleotide sequence