Experiment: Carbon source Sucrose 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1202 and Pf6N2E2_1203 are separated by 139 nucleotides Pf6N2E2_1203 and Pf6N2E2_1204 are separated by 12 nucleotides
Pf6N2E2_1202 - hypothetical protein, at 1,404,775 to 1,408,689
_1202
Pf6N2E2_1203 - Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16), at 1,408,829 to 1,409,302
_1203
Pf6N2E2_1204 - Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16), at 1,409,315 to 1,411,552
_1204
Position (kb)
1408
1409
1410 Strain fitness (log2 ratio)
-2
-1
0
1 at 1407.927 kb on + strand, within Pf6N2E2_1202 at 1408.012 kb on + strand, within Pf6N2E2_1202 at 1408.012 kb on + strand, within Pf6N2E2_1202 at 1408.012 kb on + strand, within Pf6N2E2_1202 at 1408.013 kb on - strand, within Pf6N2E2_1202 at 1408.013 kb on - strand, within Pf6N2E2_1202 at 1408.013 kb on - strand, within Pf6N2E2_1202 at 1408.013 kb on - strand, within Pf6N2E2_1202 at 1408.017 kb on - strand, within Pf6N2E2_1202 at 1408.112 kb on + strand, within Pf6N2E2_1202 at 1408.265 kb on + strand, within Pf6N2E2_1202 at 1408.266 kb on - strand, within Pf6N2E2_1202 at 1408.290 kb on + strand, within Pf6N2E2_1202 at 1408.436 kb on - strand at 1408.436 kb on - strand at 1408.441 kb on + strand at 1408.442 kb on - strand at 1408.703 kb on + strand at 1408.780 kb on + strand at 1408.780 kb on + strand at 1408.788 kb on + strand at 1408.789 kb on - strand at 1408.789 kb on - strand at 1408.790 kb on + strand at 1408.829 kb on - strand at 1409.252 kb on + strand, within Pf6N2E2_1203 at 1409.253 kb on - strand, within Pf6N2E2_1203 at 1409.253 kb on - strand, within Pf6N2E2_1203 at 1409.253 kb on - strand, within Pf6N2E2_1203 at 1409.253 kb on - strand, within Pf6N2E2_1203 at 1409.253 kb on - strand, within Pf6N2E2_1203 at 1409.687 kb on + strand, within Pf6N2E2_1204 at 1409.748 kb on - strand, within Pf6N2E2_1204 at 1409.748 kb on - strand, within Pf6N2E2_1204 at 1410.139 kb on - strand, within Pf6N2E2_1204 at 1410.203 kb on + strand, within Pf6N2E2_1204 at 1410.204 kb on - strand, within Pf6N2E2_1204
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 2.5 mM remove 1,407,927 + Pf6N2E2_1202 0.81 -0.3 1,408,012 + Pf6N2E2_1202 0.83 -0.6 1,408,012 + Pf6N2E2_1202 0.83 -2.2 1,408,012 + Pf6N2E2_1202 0.83 +0.4 1,408,013 - Pf6N2E2_1202 0.83 -0.8 1,408,013 - Pf6N2E2_1202 0.83 +0.2 1,408,013 - Pf6N2E2_1202 0.83 +0.6 1,408,013 - Pf6N2E2_1202 0.83 -0.2 1,408,017 - Pf6N2E2_1202 0.83 -0.7 1,408,112 + Pf6N2E2_1202 0.85 +0.5 1,408,265 + Pf6N2E2_1202 0.89 -0.6 1,408,266 - Pf6N2E2_1202 0.89 +0.4 1,408,290 + Pf6N2E2_1202 0.90 +0.4 1,408,436 - +0.4 1,408,436 - -0.1 1,408,441 + +0.4 1,408,442 - -2.2 1,408,703 + +0.4 1,408,780 + +1.4 1,408,780 + -1.6 1,408,788 + +0.8 1,408,789 - -0.6 1,408,789 - +0.4 1,408,790 + +0.0 1,408,829 - +0.4 1,409,252 + Pf6N2E2_1203 0.89 +0.4 1,409,253 - Pf6N2E2_1203 0.89 -0.6 1,409,253 - Pf6N2E2_1203 0.89 -1.6 1,409,253 - Pf6N2E2_1203 0.89 -0.6 1,409,253 - Pf6N2E2_1203 0.89 -0.6 1,409,253 - Pf6N2E2_1203 0.89 -1.2 1,409,687 + Pf6N2E2_1204 0.17 -0.6 1,409,748 - Pf6N2E2_1204 0.19 -1.2 1,409,748 - Pf6N2E2_1204 0.19 +0.4 1,410,139 - Pf6N2E2_1204 0.37 -1.1 1,410,203 + Pf6N2E2_1204 0.40 +0.6 1,410,204 - Pf6N2E2_1204 0.40 +0.4
Or see this region's nucleotide sequence