Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_867 and Pf6N2E2_868 are separated by 319 nucleotides Pf6N2E2_868 and Pf6N2E2_869 are separated by 101 nucleotides
Pf6N2E2_867 - PhaK-like protein, at 1,015,416 to 1,016,696
_867
Pf6N2E2_868 - Transcriptional regulator, HxlR family, at 1,017,016 to 1,017,399
_868
Pf6N2E2_869 - FMN oxidoreductase, at 1,017,501 to 1,018,619
_869
Position (kb) 1017
1018 Strain fitness (log2 ratio) -2
-1
0
1 at 1016.305 kb on - strand, within Pf6N2E2_867 at 1016.305 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.510 kb on - strand, within Pf6N2E2_867 at 1016.565 kb on + strand, within Pf6N2E2_867 at 1016.677 kb on - strand at 1016.692 kb on + strand at 1016.694 kb on + strand at 1016.736 kb on + strand at 1016.736 kb on + strand at 1016.737 kb on - strand at 1016.737 kb on - strand at 1016.829 kb on - strand at 1016.829 kb on - strand at 1016.880 kb on + strand at 1016.882 kb on + strand at 1016.882 kb on + strand at 1016.986 kb on + strand at 1016.986 kb on + strand at 1016.986 kb on + strand at 1016.986 kb on + strand at 1016.995 kb on + strand at 1017.153 kb on - strand, within Pf6N2E2_868 at 1017.232 kb on - strand, within Pf6N2E2_868 at 1017.232 kb on - strand, within Pf6N2E2_868 at 1017.328 kb on - strand, within Pf6N2E2_868 at 1017.415 kb on + strand at 1017.416 kb on - strand at 1017.416 kb on - strand at 1017.416 kb on - strand at 1017.417 kb on + strand at 1017.418 kb on - strand at 1017.418 kb on - strand at 1017.418 kb on - strand at 1017.418 kb on - strand at 1017.422 kb on - strand at 1017.422 kb on - strand at 1017.463 kb on - strand at 1017.470 kb on - strand at 1017.526 kb on + strand at 1017.527 kb on - strand at 1017.636 kb on + strand, within Pf6N2E2_869 at 1017.636 kb on + strand, within Pf6N2E2_869 at 1017.687 kb on - strand, within Pf6N2E2_869 at 1017.687 kb on - strand, within Pf6N2E2_869 at 1017.840 kb on + strand, within Pf6N2E2_869 at 1018.026 kb on + strand, within Pf6N2E2_869 at 1018.026 kb on + strand, within Pf6N2E2_869 at 1018.056 kb on - strand, within Pf6N2E2_869 at 1018.201 kb on - strand, within Pf6N2E2_869
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 1,016,305 - Pf6N2E2_867 0.69 +1.0 1,016,305 - Pf6N2E2_867 0.69 +0.7 1,016,510 - Pf6N2E2_867 0.85 +1.0 1,016,510 - Pf6N2E2_867 0.85 -0.3 1,016,510 - Pf6N2E2_867 0.85 -1.4 1,016,510 - Pf6N2E2_867 0.85 +1.1 1,016,510 - Pf6N2E2_867 0.85 -0.0 1,016,510 - Pf6N2E2_867 0.85 +1.0 1,016,510 - Pf6N2E2_867 0.85 -1.0 1,016,510 - Pf6N2E2_867 0.85 +1.0 1,016,510 - Pf6N2E2_867 0.85 -0.4 1,016,510 - Pf6N2E2_867 0.85 +0.7 1,016,565 + Pf6N2E2_867 0.90 -0.0 1,016,677 - -0.0 1,016,692 + +0.5 1,016,694 + +1.0 1,016,736 + -0.0 1,016,736 + +1.0 1,016,737 - -0.4 1,016,737 - -0.2 1,016,829 - +1.7 1,016,829 - +0.1 1,016,880 + +0.4 1,016,882 + +0.5 1,016,882 + +0.2 1,016,986 + -0.2 1,016,986 + -0.3 1,016,986 + +0.2 1,016,986 + -1.8 1,016,995 + +0.1 1,017,153 - Pf6N2E2_868 0.36 +1.0 1,017,232 - Pf6N2E2_868 0.56 -0.0 1,017,232 - Pf6N2E2_868 0.56 -1.0 1,017,328 - Pf6N2E2_868 0.81 -0.0 1,017,415 + -0.0 1,017,416 - +1.0 1,017,416 - -0.0 1,017,416 - +1.0 1,017,417 + -0.2 1,017,418 - -0.0 1,017,418 - +1.0 1,017,418 - -0.9 1,017,418 - -0.6 1,017,422 - +0.4 1,017,422 - -1.0 1,017,463 - -1.4 1,017,470 - -0.6 1,017,526 + +1.0 1,017,527 - -0.4 1,017,636 + Pf6N2E2_869 0.12 +0.2 1,017,636 + Pf6N2E2_869 0.12 +1.2 1,017,687 - Pf6N2E2_869 0.17 +0.6 1,017,687 - Pf6N2E2_869 0.17 -0.6 1,017,840 + Pf6N2E2_869 0.30 -0.0 1,018,026 + Pf6N2E2_869 0.47 +0.5 1,018,026 + Pf6N2E2_869 0.47 +0.5 1,018,056 - Pf6N2E2_869 0.50 -0.6 1,018,201 - Pf6N2E2_869 0.63 -0.6
Or see this region's nucleotide sequence