Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_773 and Pf6N2E2_774 overlap by 4 nucleotides Pf6N2E2_774 and Pf6N2E2_775 are separated by 4 nucleotides Pf6N2E2_775 and Pf6N2E2_776 overlap by 4 nucleotides
Pf6N2E2_773 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 884,233 to 885,063
_773
Pf6N2E2_774 - Cold-shock DNA-binding domain, at 885,060 to 885,479
_774
Pf6N2E2_775 - FIG00955061: hypothetical protein, at 885,484 to 885,834
_775
Pf6N2E2_776 - Transcriptional regulator, LysR family, at 885,831 to 886,739
_776
Position (kb) 885
886 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 884.837 kb on - strand, within Pf6N2E2_773 at 884.846 kb on - strand, within Pf6N2E2_773 at 884.846 kb on - strand, within Pf6N2E2_773 at 884.851 kb on + strand, within Pf6N2E2_773 at 884.968 kb on + strand, within Pf6N2E2_773 at 884.968 kb on + strand, within Pf6N2E2_773 at 884.968 kb on + strand, within Pf6N2E2_773 at 884.969 kb on - strand, within Pf6N2E2_773 at 884.969 kb on - strand, within Pf6N2E2_773 at 884.969 kb on - strand, within Pf6N2E2_773 at 884.969 kb on - strand, within Pf6N2E2_773 at 884.969 kb on - strand, within Pf6N2E2_773 at 884.969 kb on - strand, within Pf6N2E2_773 at 885.469 kb on - strand at 885.485 kb on + strand at 885.486 kb on - strand at 885.486 kb on - strand at 885.624 kb on - strand, within Pf6N2E2_775 at 885.770 kb on + strand, within Pf6N2E2_775 at 885.771 kb on - strand, within Pf6N2E2_775 at 885.771 kb on - strand, within Pf6N2E2_775 at 885.771 kb on - strand, within Pf6N2E2_775 at 885.771 kb on - strand, within Pf6N2E2_775 at 885.771 kb on - strand, within Pf6N2E2_775 at 885.834 kb on + strand at 885.842 kb on + strand at 885.843 kb on - strand at 885.843 kb on - strand at 885.843 kb on - strand at 886.006 kb on + strand, within Pf6N2E2_776 at 886.006 kb on + strand, within Pf6N2E2_776 at 886.006 kb on + strand, within Pf6N2E2_776 at 886.006 kb on + strand, within Pf6N2E2_776 at 886.006 kb on + strand, within Pf6N2E2_776 at 886.006 kb on + strand at 886.006 kb on + strand, within Pf6N2E2_776 at 886.007 kb on - strand, within Pf6N2E2_776 at 886.007 kb on - strand, within Pf6N2E2_776 at 886.007 kb on - strand, within Pf6N2E2_776 at 886.010 kb on + strand, within Pf6N2E2_776 at 886.010 kb on + strand, within Pf6N2E2_776 at 886.011 kb on - strand, within Pf6N2E2_776 at 886.020 kb on + strand, within Pf6N2E2_776 at 886.367 kb on + strand, within Pf6N2E2_776 at 886.367 kb on + strand, within Pf6N2E2_776 at 886.388 kb on - strand, within Pf6N2E2_776 at 886.410 kb on + strand, within Pf6N2E2_776 at 886.546 kb on + strand, within Pf6N2E2_776 at 886.546 kb on + strand, within Pf6N2E2_776 at 886.714 kb on + strand at 886.714 kb on + strand at 886.714 kb on + strand at 886.717 kb on + strand at 886.717 kb on + strand at 886.718 kb on - strand at 886.718 kb on - strand at 886.773 kb on + strand at 886.774 kb on - strand at 886.811 kb on - strand at 886.814 kb on + strand at 886.814 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 884,837 - Pf6N2E2_773 0.73 +0.3 884,846 - Pf6N2E2_773 0.74 +0.7 884,846 - Pf6N2E2_773 0.74 +0.2 884,851 + Pf6N2E2_773 0.74 +1.2 884,968 + Pf6N2E2_773 0.88 -0.1 884,968 + Pf6N2E2_773 0.88 -1.1 884,968 + Pf6N2E2_773 0.88 +1.0 884,969 - Pf6N2E2_773 0.89 +0.4 884,969 - Pf6N2E2_773 0.89 -0.0 884,969 - Pf6N2E2_773 0.89 -1.5 884,969 - Pf6N2E2_773 0.89 +0.1 884,969 - Pf6N2E2_773 0.89 -0.3 884,969 - Pf6N2E2_773 0.89 +0.0 885,469 - +1.0 885,485 + -0.6 885,486 - +0.2 885,486 - +0.1 885,624 - Pf6N2E2_775 0.40 -0.0 885,770 + Pf6N2E2_775 0.81 +1.0 885,771 - Pf6N2E2_775 0.82 -0.6 885,771 - Pf6N2E2_775 0.82 -0.6 885,771 - Pf6N2E2_775 0.82 -1.3 885,771 - Pf6N2E2_775 0.82 -2.0 885,771 - Pf6N2E2_775 0.82 -2.8 885,834 + +0.3 885,842 + -0.6 885,843 - -0.1 885,843 - +1.0 885,843 - -0.7 886,006 + Pf6N2E2_776 0.19 +1.0 886,006 + Pf6N2E2_776 0.19 +0.0 886,006 + Pf6N2E2_776 0.19 +1.0 886,006 + Pf6N2E2_776 0.19 +0.4 886,006 + Pf6N2E2_776 0.19 +0.3 886,006 + -0.3 886,006 + Pf6N2E2_776 0.19 -1.7 886,007 - Pf6N2E2_776 0.19 -1.3 886,007 - Pf6N2E2_776 0.19 +0.0 886,007 - Pf6N2E2_776 0.19 +0.4 886,010 + Pf6N2E2_776 0.20 +0.4 886,010 + Pf6N2E2_776 0.20 -1.3 886,011 - Pf6N2E2_776 0.20 +0.0 886,020 + Pf6N2E2_776 0.21 -0.6 886,367 + Pf6N2E2_776 0.59 -0.1 886,367 + Pf6N2E2_776 0.59 -1.3 886,388 - Pf6N2E2_776 0.61 -1.0 886,410 + Pf6N2E2_776 0.64 -0.3 886,546 + Pf6N2E2_776 0.79 +0.7 886,546 + Pf6N2E2_776 0.79 -0.6 886,714 + +1.0 886,714 + +1.3 886,714 + +0.0 886,717 + -0.6 886,717 + -1.3 886,718 - +0.0 886,718 - -0.9 886,773 + -1.0 886,774 - -1.0 886,811 - -0.6 886,814 + -2.4 886,814 + +1.0
Or see this region's nucleotide sequence