Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5391

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
6,197,064	-		Pf6N2E2_5390	0.55	-2.0
6,197,162	+		Pf6N2E2_5390	0.63	-0.4
6,197,162	+		Pf6N2E2_5390	0.63	-0.1
6,197,162	+		Pf6N2E2_5390	0.63	-1.6
6,197,162	+		Pf6N2E2_5390	0.63	+0.5
6,197,163	-		Pf6N2E2_5390	0.63	+0.6
6,197,163	-		Pf6N2E2_5390	0.63	+0.3
6,197,163	-		Pf6N2E2_5390	0.63	+0.8
6,197,213	+		Pf6N2E2_5390	0.68	+0.7
6,197,213	+		Pf6N2E2_5390	0.68	-0.2
6,197,213	+		Pf6N2E2_5390	0.68	-1.4
6,197,282	+		Pf6N2E2_5390	0.74	-0.4
6,197,624	+				+0.1
6,197,625	-				-1.2
6,197,681	-				+1.6
6,197,699	+				+0.0
6,197,749	+				-1.7
6,197,749	+				-0.4
6,197,750	-				+1.3
6,197,750	-				-0.5
6,197,899	+				+1.6
6,197,899	+				-1.6
6,197,899	+				+1.6
6,197,899	+				+0.6
6,197,899	+				-1.0
6,197,899	+				-0.6
6,197,899	+				+1.6
6,197,899	+				-0.5
6,197,899	+				-1.2
6,197,899	+				+0.0
6,197,899	+				+0.6
6,197,899	+				-1.4
6,197,899	+				-1.4
6,197,899	+				+0.0
6,197,899	+				+0.0
6,197,900	-				-1.4
6,197,900	-				+1.6
6,197,900	-				-1.5
6,197,900	-				+0.0
6,197,900	-				-2.1
6,197,912	-				-1.8
6,197,929	+				-0.5
6,197,930	-				-2.5
6,197,957	+				+0.6
6,197,957	+				+0.0
6,197,958	-				+0.6
6,197,958	-				-0.7
6,197,958	-				+0.8
6,197,958	-				-0.6
6,197,958	-				+1.6
6,197,961	+				-0.4
6,197,961	+				+0.6
6,197,961	+				-0.4
6,197,961	+				-0.7
6,197,961	+				-1.3
6,197,961	+				-1.9
6,197,962	-				+0.0
6,197,962	-				+1.6
6,197,962	-				-1.7
6,197,962	-				-1.2
6,197,976	+				+0.0
6,197,976	+				+0.0
6,197,976	+				-0.4
6,197,976	+				-1.5
6,197,977	-				-0.4
6,197,977	-				+0.6
6,197,977	-				+0.8
6,198,181	+		Pf6N2E2_5391	0.19	-0.7
6,198,181	+		Pf6N2E2_5391	0.19	+1.6
6,198,181	+		Pf6N2E2_5391	0.19	-0.4
6,198,181	+		Pf6N2E2_5391	0.19	+1.6
6,198,182	-		Pf6N2E2_5391	0.19	-0.7
6,198,389	+		Pf6N2E2_5391	0.34	+0.6
6,198,389	+		Pf6N2E2_5391	0.34	+1.6
6,198,390	-		Pf6N2E2_5391	0.34	-1.7
6,198,689	+		Pf6N2E2_5391	0.56	-0.5
6,198,689	+		Pf6N2E2_5391	0.56	+1.6
6,198,690	-		Pf6N2E2_5391	0.56	+0.6
6,198,690	-		Pf6N2E2_5391	0.56	-0.5
6,198,690	-		Pf6N2E2_5391	0.56	-2.0
6,198,690	-		Pf6N2E2_5391	0.56	-1.6
6,198,690	-		Pf6N2E2_5391	0.56	-1.4
6,198,690	-		Pf6N2E2_5391	0.56	+0.0
6,198,983	+		Pf6N2E2_5391	0.77	-0.4
6,198,983	+		Pf6N2E2_5391	0.77	-0.1
6,198,983	+		Pf6N2E2_5391	0.77	-1.5
6,198,983	+		Pf6N2E2_5391	0.77	+0.3
6,198,983	+		Pf6N2E2_5391	0.77	-1.0
6,198,983	+		Pf6N2E2_5391	0.77	+0.0
6,198,984	-		Pf6N2E2_5391	0.77	-2.1
6,198,984	-		Pf6N2E2_5391	0.77	-1.5
6,198,984	-		Pf6N2E2_5391	0.77	+0.6
6,198,984	-		Pf6N2E2_5391	0.77	-1.2
6,198,984	-		Pf6N2E2_5391	0.77	-0.8
6,198,984	-		Pf6N2E2_5391	0.77	+0.0
6,199,025	+		Pf6N2E2_5391	0.80	-1.1
6,199,025	+		Pf6N2E2_5391	0.80	-1.8
6,199,025	+		Pf6N2E2_5391	0.80	-1.3
6,199,026	-		Pf6N2E2_5391	0.80	-1.8
6,199,026	-		Pf6N2E2_5391	0.80	-1.5
6,199,026	-		Pf6N2E2_5391	0.80	+0.2
6,199,026	-		Pf6N2E2_5391	0.80	-0.7
6,199,026	-		Pf6N2E2_5391	0.80	-2.5
6,199,026	-		Pf6N2E2_5391	0.80	-2.3
6,199,168	+				+0.2
6,199,175	+				-2.2
6,199,175	+				-0.3
6,199,175	+				-0.5
6,199,175	+				-1.1
6,199,175	+				+0.6
6,199,175	+				+0.2
6,199,175	+				-1.4
6,199,176	-				+0.0
6,199,176	-				-1.4
6,199,176	-				-1.0
6,199,176	-				-0.6
6,199,176	-				+0.5
6,199,205	+				+1.6
6,199,205	+				+1.6
6,199,205	+				-1.1
6,199,205	+				-1.4
6,199,206	-				-0.7
6,199,206	-				-0.1
6,199,332	-				-1.1
6,199,347	-				-1.4
6,199,347	-				-0.0
6,199,347	-				-0.1
6,199,347	-				-1.0
6,199,347	-				+0.3
6,199,353	+				-0.2
6,199,353	+				-1.7
6,199,354	-				-0.2
6,199,354	-				+0.9
6,199,354	-				-0.5
6,199,435	+				+0.4
6,199,435	+				+0.0
6,199,443	+				-1.7
6,199,443	+				-0.9
6,199,444	-				+1.0
6,199,469	-				-0.4
6,199,755	+		Pf6N2E2_5392	0.59	-2.5
6,199,844	+		Pf6N2E2_5392	0.78	+0.0
6,199,844	+		Pf6N2E2_5392	0.78	-1.0
6,199,844	+		Pf6N2E2_5392	0.78	+0.2
6,199,845	-		Pf6N2E2_5392	0.78	+0.9
6,199,845	-		Pf6N2E2_5392	0.78	+1.3