Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4277

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,976,849	-		Pf6N2E2_4276	0.36	+0.5
4,976,849	-		Pf6N2E2_4276	0.36	+1.1
4,976,937	-		Pf6N2E2_4276	0.46	+2.1
4,976,937	-		Pf6N2E2_4276	0.46	-2.7
4,977,014	+		Pf6N2E2_4276	0.55	-1.4
4,977,283	-		Pf6N2E2_4276	0.86	+0.3
4,977,401	+				+2.1
4,977,401	+				+0.3
4,977,402	-				-0.1
4,977,402	-				+0.3
4,977,402	-				-0.0
4,977,402	-				-1.0
4,977,402	-				+1.3
4,977,402	-				-0.1
4,977,446	+				-0.2
4,977,446	+				+1.1
4,977,447	-				+0.6
4,977,447	-				-0.8
4,977,447	-				-0.9
4,977,490	+				+1.1
4,977,490	+				+1.1
4,977,491	-				+1.1
4,977,491	-				+0.5
4,977,491	-				-0.2
4,977,494	+				+0.3
4,977,494	+				-0.5
4,977,494	+				-0.6
4,977,494	+				-0.6
4,977,494	+				+2.4
4,977,494	+				+0.2
4,977,494	+				-0.0
4,977,494	+				-0.5
4,977,495	-				+1.1
4,977,495	-				+0.3
4,977,495	-				+1.1
4,977,495	-				-0.3
4,977,495	-				-1.5
4,977,495	-				+0.5
4,977,495	-				+1.1
4,977,495	-				+0.5
4,977,542	+				+0.5
4,977,543	-				-0.2
4,977,563	+				-1.6
4,977,564	-				+0.4
4,977,645	-				-0.1
4,977,657	+				+0.0
4,977,657	+				+1.1
4,977,657	+				-0.5
4,977,657	+				-1.8
4,977,657	+				-0.2
4,977,657	+				-0.1
4,977,657	+				+0.4
4,977,658	-				+0.1
4,977,658	-				-0.9
4,977,658	-				+1.5
4,977,658	-				+1.4
4,977,658	-				-1.7
4,977,658	-				+1.9
4,977,658	-				-0.6
4,977,658	-				+0.1
4,977,658	-				+0.6
4,977,690	-				-0.5
4,977,690	-				-0.5
4,977,690	-				+0.4
4,977,773	+				+1.1
4,977,774	-				-0.3
4,977,834	-				-1.1
4,978,200	+		Pf6N2E2_4277	0.39	-3.8
4,978,205	+		Pf6N2E2_4277	0.40	+0.5
4,978,205	+		Pf6N2E2_4277	0.40	-2.6
4,978,205	+		Pf6N2E2_4277	0.40	-2.5
4,978,206	-		Pf6N2E2_4277	0.40	-3.6
4,978,206	-		Pf6N2E2_4277	0.40	+1.3
4,978,206	-		Pf6N2E2_4277	0.40	-2.5
4,978,206	-		Pf6N2E2_4277	0.40	-3.1
4,978,206	-		Pf6N2E2_4277	0.40	+2.1
4,978,206	-		Pf6N2E2_4277	0.40	-4.1
4,978,206	-		Pf6N2E2_4277	0.40	-4.1
4,978,207	+		Pf6N2E2_4277	0.40	-1.3
4,978,207	+		Pf6N2E2_4277	0.40	-2.3
4,978,208	-		Pf6N2E2_4277	0.40	-0.7
4,978,208	-		Pf6N2E2_4277	0.40	-1.1
4,978,208	-		Pf6N2E2_4277	0.40	+1.1
4,978,208	-		Pf6N2E2_4277	0.40	-3.4
4,978,462	+		Pf6N2E2_4277	0.67	+1.1
4,978,462	+		Pf6N2E2_4277	0.67	-1.2
4,978,462	+		Pf6N2E2_4277	0.67	-2.5
4,978,463	-		Pf6N2E2_4277	0.67	-2.0
4,978,463	-		Pf6N2E2_4277	0.67	-2.9
4,978,463	-		Pf6N2E2_4277	0.67	-0.9
4,978,604	-		Pf6N2E2_4277	0.82	-3.4
4,978,604	-		Pf6N2E2_4277	0.82	+2.1
4,978,617	+		Pf6N2E2_4277	0.84	-2.1
4,978,617	+		Pf6N2E2_4277	0.84	+2.1
4,978,617	+		Pf6N2E2_4277	0.84	-2.6
4,978,617	+		Pf6N2E2_4277	0.84	+0.5
4,978,617	+		Pf6N2E2_4277	0.84	-3.0
4,978,618	-		Pf6N2E2_4277	0.84	-0.3
4,978,618	-		Pf6N2E2_4277	0.84	-1.3
4,978,618	-		Pf6N2E2_4277	0.84	-0.7
4,978,618	-		Pf6N2E2_4277	0.84	-0.5
4,978,618	-		Pf6N2E2_4277	0.84	-3.1
4,978,621	+		Pf6N2E2_4277	0.84	-0.8
4,978,621	+		Pf6N2E2_4277	0.84	+0.5
4,978,621	+		Pf6N2E2_4277	0.84	-2.7
4,978,621	+		Pf6N2E2_4277	0.84	-1.3
4,978,621	+		Pf6N2E2_4277	0.84	-2.9
4,978,621	+		Pf6N2E2_4277	0.84	-0.2
4,978,621	+		Pf6N2E2_4277	0.84	-0.6
4,978,622	-		Pf6N2E2_4277	0.84	-2.6
4,978,622	-		Pf6N2E2_4277	0.84	-4.6
4,978,622	-		Pf6N2E2_4277	0.84	-1.6
4,978,622	-		Pf6N2E2_4277	0.84	+1.1
4,978,622	-		Pf6N2E2_4277	0.84	-0.1
4,978,622	-		Pf6N2E2_4277	0.84	-4.4
4,978,622	-		Pf6N2E2_4277	0.84	-3.6
4,978,622	-		Pf6N2E2_4277	0.84	+0.5
4,978,622	-		Pf6N2E2_4277	0.84	-1.7
4,978,622	-		Pf6N2E2_4277	0.84	-2.3
4,978,622	-		Pf6N2E2_4277	0.84	-2.8
4,978,622	-		Pf6N2E2_4277	0.84	-2.4
4,978,668	+		Pf6N2E2_4277	0.89	+1.1
4,978,718	-				-2.5
4,978,718	-				-2.6
4,978,718	-				-2.1
4,978,818	+				-1.7
4,978,819	-				-0.6
4,978,890	-				-2.1
4,978,913	+				-0.3
4,978,914	-				+1.1
4,978,953	-				-1.8
4,978,953	-				-0.2
4,978,982	+				-0.7
4,978,982	+				-1.3
4,979,387	+		Pf6N2E2_4278	0.29	-2.5
4,979,734	+		Pf6N2E2_4278	0.53	-3.2
4,979,734	+		Pf6N2E2_4278	0.53	-2.2
4,979,735	-		Pf6N2E2_4278	0.53	+1.7