Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3802

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,429,003	+				-0.8
4,429,003	+				-1.3
4,429,003	+				-1.1
4,429,004	-				+0.7
4,429,004	-				-0.0
4,429,300	+		Pf6N2E2_3801	0.41	+0.9
4,429,301	-		Pf6N2E2_3801	0.41	+0.6
4,429,541	+		Pf6N2E2_3801	0.70	+1.4
4,429,541	+		Pf6N2E2_3801	0.70	+0.5
4,429,541	+		Pf6N2E2_3801	0.70	-0.7
4,429,697	+		Pf6N2E2_3801	0.88	+1.9
4,429,697	+		Pf6N2E2_3801	0.88	-0.6
4,429,697	+		Pf6N2E2_3801	0.88	+0.5
4,429,821	+				+1.9
4,429,821	+				+0.2
4,429,821	+				+1.5
4,429,822	-				+0.8
4,429,834	+				-0.1
4,429,834	+				+1.9
4,429,834	+				-0.1
4,429,834	+				-1.6
4,429,835	-				-0.2
4,430,102	+		Pf6N2E2_3802	0.37	-1.3
4,430,151	+		Pf6N2E2_3802	0.42	-0.4
4,430,151	+		Pf6N2E2_3802	0.42	-1.3
4,430,151	+		Pf6N2E2_3802	0.42	-1.0
4,430,152	-		Pf6N2E2_3802	0.42	-0.7
4,430,152	-		Pf6N2E2_3802	0.42	+0.7
4,430,217	+		Pf6N2E2_3802	0.50	+0.5
4,430,217	+		Pf6N2E2_3802	0.50	+0.1
4,430,568	+				+0.3
4,430,568	+				-0.2
4,430,568	+				-1.4
4,430,568	+				+0.4
4,430,623	+				+0.3
4,430,623	+				-1.2
4,430,641	+				-0.2
4,430,641	+				+1.9
4,430,641	+				-1.1
4,430,641	+				+1.2
4,430,641	+				-0.4
4,430,641	+				-0.1
4,430,642	-				-0.6
4,430,642	-				+0.7
4,430,688	+				-0.4
4,430,712	+				-1.1
4,430,712	+				+0.1
4,431,019	-		Pf6N2E2_3803	0.32	-0.7
4,431,019	-		Pf6N2E2_3803	0.32	-0.7
4,431,021	+		Pf6N2E2_3803	0.32	+0.3
4,431,021	+		Pf6N2E2_3803	0.32	+1.3
4,431,021	+		Pf6N2E2_3803	0.32	+0.5
4,431,022	-		Pf6N2E2_3803	0.32	+0.2
4,431,022	-		Pf6N2E2_3803	0.32	+0.1
4,431,022	-		Pf6N2E2_3803	0.32	+0.7
4,431,048	+		Pf6N2E2_3803	0.35	-0.1
4,431,048	+		Pf6N2E2_3803	0.35	+1.9
4,431,048	+		Pf6N2E2_3803	0.35	-1.2
4,431,105	+		Pf6N2E2_3803	0.41	+0.9
4,431,106	-		Pf6N2E2_3803	0.41	+1.7
4,431,123	+		Pf6N2E2_3803	0.43	-1.3
4,431,180	+		Pf6N2E2_3803	0.48	-0.1
4,431,228	+		Pf6N2E2_3803	0.53	-0.9
4,431,306	+		Pf6N2E2_3803	0.61	+1.3
4,431,306	+		Pf6N2E2_3803	0.61	+0.4
4,431,318	+		Pf6N2E2_3803	0.63	+0.6
4,431,318	+		Pf6N2E2_3803	0.63	-3.5
4,431,318	+		Pf6N2E2_3803	0.63	+1.9
4,431,319	-		Pf6N2E2_3803	0.63	+0.4
4,431,319	-		Pf6N2E2_3803	0.63	-0.1
4,431,319	-		Pf6N2E2_3803	0.63	+0.9
4,431,319	-		Pf6N2E2_3803	0.63	+0.1
4,431,319	-		Pf6N2E2_3803	0.63	+0.5
4,431,319	-		Pf6N2E2_3803	0.63	+1.9
4,431,319	-		Pf6N2E2_3803	0.63	-0.2
4,431,502	-		Pf6N2E2_3803	0.82	+0.3