Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3701 and Pf6N2E2_3702 overlap by 4 nucleotides Pf6N2E2_3702 and Pf6N2E2_3703 are separated by 14 nucleotides Pf6N2E2_3703 and Pf6N2E2_3704 are separated by 70 nucleotides
Pf6N2E2_3701 - Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family, at 4,316,185 to 4,317,189
_3701
Pf6N2E2_3702 - FIG00953907: hypothetical protein, at 4,317,186 to 4,317,485
_3702
Pf6N2E2_3703 - Oxidoreductase, short chain dehydrogenase/reductase family, at 4,317,500 to 4,318,249
_3703
Pf6N2E2_3704 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 4,318,320 to 4,319,081
_3704
Position (kb) 4317
4318 Strain fitness (log2 ratio) -1
0
1
2 at 4316.274 kb on + strand at 4316.274 kb on + strand at 4316.274 kb on + strand at 4316.274 kb on + strand at 4316.274 kb on + strand at 4316.275 kb on - strand at 4316.279 kb on - strand at 4316.323 kb on + strand, within Pf6N2E2_3701 at 4316.431 kb on + strand, within Pf6N2E2_3701 at 4316.431 kb on + strand, within Pf6N2E2_3701 at 4316.431 kb on + strand, within Pf6N2E2_3701 at 4316.432 kb on - strand, within Pf6N2E2_3701 at 4316.432 kb on - strand, within Pf6N2E2_3701 at 4316.432 kb on - strand, within Pf6N2E2_3701 at 4316.602 kb on + strand, within Pf6N2E2_3701 at 4316.602 kb on + strand, within Pf6N2E2_3701 at 4316.602 kb on + strand, within Pf6N2E2_3701 at 4316.602 kb on + strand, within Pf6N2E2_3701 at 4316.602 kb on + strand, within Pf6N2E2_3701 at 4316.602 kb on + strand, within Pf6N2E2_3701 at 4316.603 kb on - strand, within Pf6N2E2_3701 at 4316.603 kb on - strand, within Pf6N2E2_3701 at 4316.769 kb on + strand, within Pf6N2E2_3701 at 4316.800 kb on + strand, within Pf6N2E2_3701 at 4317.325 kb on + strand, within Pf6N2E2_3702 at 4317.325 kb on + strand, within Pf6N2E2_3702 at 4317.325 kb on + strand, within Pf6N2E2_3702 at 4317.325 kb on + strand, within Pf6N2E2_3702 at 4317.465 kb on + strand at 4317.465 kb on + strand at 4317.465 kb on + strand at 4317.755 kb on - strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.865 kb on + strand, within Pf6N2E2_3703 at 4317.866 kb on - strand, within Pf6N2E2_3703 at 4317.866 kb on - strand, within Pf6N2E2_3703 at 4317.866 kb on - strand, within Pf6N2E2_3703 at 4317.866 kb on - strand, within Pf6N2E2_3703 at 4317.866 kb on - strand, within Pf6N2E2_3703 at 4317.866 kb on - strand, within Pf6N2E2_3703 at 4317.866 kb on - strand, within Pf6N2E2_3703 at 4318.174 kb on - strand, within Pf6N2E2_3703 at 4318.284 kb on + strand at 4318.378 kb on + strand at 4318.378 kb on + strand at 4318.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 4,316,274 + -0.5 4,316,274 + +0.9 4,316,274 + +0.2 4,316,274 + +0.2 4,316,274 + -0.5 4,316,275 - -0.2 4,316,279 - +1.9 4,316,323 + Pf6N2E2_3701 0.14 -1.1 4,316,431 + Pf6N2E2_3701 0.24 +0.9 4,316,431 + Pf6N2E2_3701 0.24 -1.4 4,316,431 + Pf6N2E2_3701 0.24 +0.9 4,316,432 - Pf6N2E2_3701 0.25 -0.6 4,316,432 - Pf6N2E2_3701 0.25 +0.3 4,316,432 - Pf6N2E2_3701 0.25 +1.9 4,316,602 + Pf6N2E2_3701 0.41 -0.1 4,316,602 + Pf6N2E2_3701 0.41 +0.3 4,316,602 + Pf6N2E2_3701 0.41 -0.8 4,316,602 + Pf6N2E2_3701 0.41 -0.5 4,316,602 + Pf6N2E2_3701 0.41 +0.2 4,316,602 + Pf6N2E2_3701 0.41 +0.9 4,316,603 - Pf6N2E2_3701 0.42 -0.1 4,316,603 - Pf6N2E2_3701 0.42 +1.9 4,316,769 + Pf6N2E2_3701 0.58 -0.7 4,316,800 + Pf6N2E2_3701 0.61 -0.3 4,317,325 + Pf6N2E2_3702 0.46 -1.6 4,317,325 + Pf6N2E2_3702 0.46 +0.3 4,317,325 + Pf6N2E2_3702 0.46 +0.9 4,317,325 + Pf6N2E2_3702 0.46 -0.9 4,317,465 + -1.2 4,317,465 + +0.9 4,317,465 + -0.1 4,317,755 - Pf6N2E2_3703 0.34 -0.1 4,317,865 + Pf6N2E2_3703 0.49 -1.1 4,317,865 + Pf6N2E2_3703 0.49 -0.1 4,317,865 + Pf6N2E2_3703 0.49 +0.7 4,317,865 + Pf6N2E2_3703 0.49 -1.6 4,317,865 + Pf6N2E2_3703 0.49 +0.9 4,317,865 + Pf6N2E2_3703 0.49 +0.0 4,317,865 + Pf6N2E2_3703 0.49 +0.4 4,317,865 + Pf6N2E2_3703 0.49 +0.4 4,317,865 + Pf6N2E2_3703 0.49 -0.3 4,317,865 + Pf6N2E2_3703 0.49 +0.0 4,317,865 + Pf6N2E2_3703 0.49 +0.5 4,317,865 + Pf6N2E2_3703 0.49 +0.1 4,317,866 - Pf6N2E2_3703 0.49 +0.7 4,317,866 - Pf6N2E2_3703 0.49 +1.9 4,317,866 - Pf6N2E2_3703 0.49 -0.1 4,317,866 - Pf6N2E2_3703 0.49 -0.4 4,317,866 - Pf6N2E2_3703 0.49 +0.1 4,317,866 - Pf6N2E2_3703 0.49 -0.5 4,317,866 - Pf6N2E2_3703 0.49 +0.1 4,318,174 - Pf6N2E2_3703 0.90 -0.5 4,318,284 + -0.1 4,318,378 + +0.5 4,318,378 + +0.3 4,318,379 - -0.1
Or see this region's nucleotide sequence