Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2852

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
3,341,537	+				-0.3
3,341,538	-				+1.6
3,341,631	+				-0.2
3,342,315	+				-0.0
3,342,316	-				-0.2
3,342,316	-				+0.4
3,342,417	+				-1.4
3,342,418	-				-1.8
3,342,489	+				+0.6
3,342,489	+				-1.8
3,342,490	-				-1.8
3,342,490	-				+1.6
3,342,574	-				+1.6
3,342,647	+				+1.6
3,342,725	+				+1.6
3,342,726	-				-0.6
3,342,933	-		Pf6N2E2_2852	0.19	-0.2
3,342,933	-		Pf6N2E2_2852	0.19	-0.8
3,342,934	+		Pf6N2E2_2852	0.19	+0.4
3,342,935	-		Pf6N2E2_2852	0.19	+0.2
3,342,941	+		Pf6N2E2_2852	0.20	+0.6
3,342,942	-		Pf6N2E2_2852	0.20	-2.8
3,342,962	-		Pf6N2E2_2852	0.21	-1.2
3,342,980	+		Pf6N2E2_2852	0.22	-0.2
3,342,981	-		Pf6N2E2_2852	0.22	-1.0
3,343,061	+		Pf6N2E2_2852	0.26	-0.4
3,343,061	+		Pf6N2E2_2852	0.26	-0.7
3,343,062	-		Pf6N2E2_2852	0.26	+0.6
3,343,062	-		Pf6N2E2_2852	0.26	-2.3
3,343,062	-		Pf6N2E2_2852	0.26	-0.4
3,343,070	+		Pf6N2E2_2852	0.26	-0.8
3,343,204	+		Pf6N2E2_2852	0.33	-0.8
3,343,204	+		Pf6N2E2_2852	0.33	-0.0
3,343,396	-		Pf6N2E2_2852	0.42	+0.6
3,343,396	-		Pf6N2E2_2852	0.42	-0.0
3,343,436	+		Pf6N2E2_2852	0.44	-1.0
3,343,766	+		Pf6N2E2_2852	0.60	+0.1
3,343,766	+		Pf6N2E2_2852	0.60	-1.6
3,343,766	+		Pf6N2E2_2852	0.60	-0.6
3,343,766	+		Pf6N2E2_2852	0.60	-0.6
3,343,766	+		Pf6N2E2_2852	0.60	-2.1
3,343,766	+		Pf6N2E2_2852	0.60	-1.3
3,343,767	-		Pf6N2E2_2852	0.60	-1.9
3,343,767	-		Pf6N2E2_2852	0.60	-1.1
3,343,767	-		Pf6N2E2_2852	0.60	-0.4
3,343,767	-		Pf6N2E2_2852	0.60	-1.4
3,343,859	+		Pf6N2E2_2852	0.64	-0.3
3,343,859	+		Pf6N2E2_2852	0.64	-0.8
3,343,860	-		Pf6N2E2_2852	0.65	-0.6
3,343,860	-		Pf6N2E2_2852	0.65	-2.1
3,343,877	+		Pf6N2E2_2852	0.65	-1.0
3,344,300	+		Pf6N2E2_2852	0.86	+1.6
3,344,301	-		Pf6N2E2_2852	0.86	-0.8
3,344,468	+				-0.0
3,344,468	+				-2.4
3,344,468	+				+0.6
3,344,468	+				-2.3
3,344,468	+				-0.5
3,344,468	+				-0.7
3,344,468	+				+0.6
3,344,469	-				-0.9
3,344,469	-				+0.6
3,344,469	-				-0.4
3,344,469	-				+0.6
3,344,469	-				+0.3
3,344,469	-				-1.4
3,344,469	-				-0.1
3,344,504	+				+1.0
3,344,505	-				+0.2
3,344,505	-				-0.0
3,344,507	+				-0.6
3,344,507	+				+0.6
3,344,507	+				+0.6
3,344,508	-				-1.0
3,344,508	-				+1.6
3,344,508	-				-1.0
3,344,508	-				-0.8
3,344,508	-				+0.1
3,344,508	-				-2.5
3,344,508	-				+0.6
3,344,508	-				-1.1
3,344,508	-				-0.4
3,344,508	-				-0.9
3,344,510	+				+1.0
3,344,510	+				-0.9
3,344,510	+				-0.2
3,344,510	+				-1.4
3,344,510	+				-1.6
3,344,510	+				-0.2
3,344,510	+				-0.6
3,344,510	+				-0.4
3,344,511	-				+1.6
3,344,511	-				-0.9
3,344,511	-				+0.7
3,344,511	-				-1.5
3,344,511	-				+1.6
3,344,546	+				+0.7
3,344,546	+				+0.6
3,344,547	-				-1.0
3,344,547	-				-0.0
3,344,547	-				-1.5
3,344,547	-				+0.2
3,344,547	-				-0.0
3,344,547	-				-0.8
3,344,547	-				-0.2
3,344,632	-				+0.5
3,344,723	-				-0.8
3,344,828	+				+0.9
3,344,973	+		Pf6N2E2_2853	0.14	-0.4
3,344,973	+		Pf6N2E2_2853	0.14	-0.2
3,344,973	+		Pf6N2E2_2853	0.14	-0.8
3,344,974	-		Pf6N2E2_2853	0.14	+2.6
3,344,989	-		Pf6N2E2_2853	0.15	+0.6
3,344,989	-		Pf6N2E2_2853	0.15	+1.6
3,344,998	-		Pf6N2E2_2853	0.16	-0.1
3,345,213	+		Pf6N2E2_2853	0.32	-0.0
3,345,213	+		Pf6N2E2_2853	0.32	+1.6
3,345,214	-		Pf6N2E2_2853	0.32	-0.6
3,345,228	+		Pf6N2E2_2853	0.33	+1.6
3,345,313	+		Pf6N2E2_2853	0.39	-1.8
3,345,313	+		Pf6N2E2_2853	0.39	+0.3
3,345,313	+		Pf6N2E2_2853	0.39	+0.1
3,345,314	-		Pf6N2E2_2853	0.39	+0.1
3,345,314	-		Pf6N2E2_2853	0.39	+2.0
3,345,314	-		Pf6N2E2_2853	0.39	+3.1
3,345,314	-		Pf6N2E2_2853	0.39	-0.3
3,345,468	+		Pf6N2E2_2853	0.51	-0.4
3,345,468	+		Pf6N2E2_2853	0.51	-0.0
3,345,469	-		Pf6N2E2_2853	0.51	-0.3
3,345,519	+		Pf6N2E2_2853	0.55	+0.6