Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2302

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
2,726,277	+		Pf6N2E2_2301	0.79	+0.0
2,726,382	+		Pf6N2E2_2301	0.83	+1.2
2,726,382	+		Pf6N2E2_2301	0.83	+1.9
2,726,382	+		Pf6N2E2_2301	0.83	-0.5
2,726,382	+		Pf6N2E2_2301	0.83	+0.7
2,726,382	+		Pf6N2E2_2301	0.83	-0.2
2,726,382	+		Pf6N2E2_2301	0.83	-0.8
2,726,382	+		Pf6N2E2_2301	0.83	-0.0
2,726,383	-		Pf6N2E2_2301	0.83	-1.1
2,726,383	-		Pf6N2E2_2301	0.83	+0.2
2,726,383	-		Pf6N2E2_2301	0.83	+0.2
2,726,383	-		Pf6N2E2_2301	0.83	+0.9
2,726,383	-		Pf6N2E2_2301	0.83	-2.1
2,726,383	-		Pf6N2E2_2301	0.83	+0.1
2,726,383	-		Pf6N2E2_2301	0.83	-0.3
2,726,383	-		Pf6N2E2_2301	0.83	-2.5
2,726,412	+		Pf6N2E2_2301	0.84	-0.7
2,726,412	+		Pf6N2E2_2301	0.84	+1.2
2,726,412	+		Pf6N2E2_2301	0.84	+0.2
2,726,430	+		Pf6N2E2_2301	0.85	-1.6
2,726,430	+		Pf6N2E2_2301	0.85	+1.2
2,726,430	+		Pf6N2E2_2301	0.85	+0.1
2,726,430	+		Pf6N2E2_2301	0.85	-0.5
2,726,430	+		Pf6N2E2_2301	0.85	-1.0
2,726,431	-		Pf6N2E2_2301	0.85	-1.0
2,726,476	-		Pf6N2E2_2301	0.86	-0.1
2,726,562	-		Pf6N2E2_2301	0.90	+0.4
2,726,771	+				+0.3
2,726,790	+				-0.7
2,726,791	-				-0.2
2,726,791	-				-0.3
2,726,791	-				-0.9
2,726,791	-				+1.3
2,726,817	+				+0.8
2,726,817	+				-0.7
2,726,817	+				+0.7
2,726,817	+				-0.2
2,726,817	+				-0.7
2,726,817	+				-0.5
2,726,817	+				+0.6
2,726,818	-				+1.3
2,726,818	-				+0.7
2,726,818	-				-0.8
2,726,818	-				+1.6
2,726,818	-				+0.5
2,726,818	-				+0.3
2,726,818	-				+0.4
2,726,818	-				-0.3
2,726,818	-				-0.2
2,726,844	+				+0.5
2,726,844	+				+1.3
2,726,844	+				+0.3
2,726,861	+				-1.6
2,726,861	+				-0.7
2,726,925	-				-0.5
2,726,925	-				-0.7
2,726,997	-				+0.7
2,726,997	-				+1.3
2,726,997	-				-0.7
2,727,009	+				-0.3
2,727,018	-				+1.1
2,727,047	+				+1.3
2,727,047	+				+0.3
2,727,047	+				-1.6
2,727,048	-				-0.3
2,727,048	-				-0.5
2,727,048	-				+0.5
2,727,050	-				+0.9
2,727,100	+				+0.7
2,727,101	-				+0.5
2,727,101	-				-0.5
2,727,101	-				-1.2
2,727,101	-				-1.9
2,727,120	+				+0.3
2,727,121	-				-0.9
2,727,121	-				-1.1
2,727,157	-				+0.3
2,727,187	+				-1.1
2,727,188	-				-0.1
2,727,188	-				-0.7
2,727,207	+				-0.3
2,727,207	+				+0.1
2,727,207	+				+0.3
2,727,207	+				+0.3
2,727,207	+				-0.3
2,727,207	+				-0.1
2,727,208	-				+1.3
2,727,208	-				+0.8
2,727,208	-				-0.7
2,727,208	-				-1.5
2,727,208	-				+0.7
2,727,208	-				+0.7
2,727,208	-				+0.3
2,727,208	-				+1.5
2,727,208	-				+0.3
2,727,208	-				+0.8
2,727,219	-				-0.0
2,727,230	-				+0.3
2,727,380	+		Pf6N2E2_2302	0.22	+0.1
2,727,380	+		Pf6N2E2_2302	0.22	-0.7
2,727,380	+		Pf6N2E2_2302	0.22	-0.1
2,727,380	+		Pf6N2E2_2302	0.22	-1.1
2,727,380	+		Pf6N2E2_2302	0.22	-0.3
2,727,380	+		Pf6N2E2_2302	0.22	-0.1
2,727,381	-		Pf6N2E2_2302	0.22	-0.0
2,727,381	-		Pf6N2E2_2302	0.22	+0.6
2,727,381	-		Pf6N2E2_2302	0.22	-0.7
2,727,389	+		Pf6N2E2_2302	0.23	-0.3
2,727,490	+		Pf6N2E2_2302	0.36	+2.8
2,727,490	+		Pf6N2E2_2302	0.36	+0.7
2,727,490	+		Pf6N2E2_2302	0.36	+0.0
2,727,491	-		Pf6N2E2_2302	0.36	+1.3
2,727,491	-		Pf6N2E2_2302	0.36	+0.5
2,727,580	+		Pf6N2E2_2302	0.47	+1.3
2,727,708	-		Pf6N2E2_2302	0.63	+1.3
2,727,745	+		Pf6N2E2_2302	0.68	-0.1
2,727,745	+		Pf6N2E2_2302	0.68	+0.7
2,727,746	-		Pf6N2E2_2302	0.68	+0.3
2,727,836	+		Pf6N2E2_2302	0.80	+0.5
2,727,971	+				+1.3
2,727,972	-				-1.6
2,727,972	-				+1.3
2,727,975	+				+0.6
2,727,975	+				-1.7
2,727,975	+				+2.5
2,727,975	+				+0.4
2,727,976	-				+1.1
2,728,023	+				-1.1
2,728,052	+				+1.6
2,728,089	-				+2.0
2,728,176	+				+0.3
2,728,176	+				+0.4
2,728,375	-		Pf6N2E2_2303	0.19	+1.2
2,728,375	-		Pf6N2E2_2303	0.19	+0.0
2,728,375	-		Pf6N2E2_2303	0.19	-0.8
2,728,375	-		Pf6N2E2_2303	0.19	-1.1
2,728,375	-		Pf6N2E2_2303	0.19	-0.6
2,728,470	+		Pf6N2E2_2303	0.25	+1.2
2,728,470	+		Pf6N2E2_2303	0.25	+0.9
2,728,470	+		Pf6N2E2_2303	0.25	+0.6
2,728,471	-		Pf6N2E2_2303	0.25	+1.2
2,728,734	+		Pf6N2E2_2303	0.42	+1.2
2,728,734	+		Pf6N2E2_2303	0.42	+0.8
2,728,735	-		Pf6N2E2_2303	0.42	+0.4
2,728,735	-		Pf6N2E2_2303	0.42	-0.3
2,728,735	-		Pf6N2E2_2303	0.42	+1.2
2,728,735	-		Pf6N2E2_2303	0.42	-1.0
2,728,866	-		Pf6N2E2_2303	0.50	-0.1
2,728,878	-		Pf6N2E2_2303	0.51	+0.8
2,728,878	-		Pf6N2E2_2303	0.51	+0.5