Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_149 and Pf6N2E2_150 are separated by 155 nucleotides Pf6N2E2_150 and Pf6N2E2_151 are separated by 2 nucleotides Pf6N2E2_151 and Pf6N2E2_152 are separated by 24 nucleotides Pf6N2E2_152 and Pf6N2E2_153 are separated by 111 nucleotides
Pf6N2E2_149 - Inner membrane component of tripartite multidrug resistance system, at 204,500 to 206,029
_149
Pf6N2E2_150 - UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54), at 206,185 to 206,934
_150
Pf6N2E2_151 - Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8), at 206,937 to 207,440
_151
Pf6N2E2_152 - hypothetical protein, at 207,465 to 207,578
_152
Pf6N2E2_153 - Glutaminyl-tRNA synthetase (EC 6.1.1.18), at 207,690 to 209,390
_153
Position (kb) 206
207 Strain fitness (log2 ratio) -1
0
1
2 at 205.340 kb on + strand, within Pf6N2E2_149 at 205.341 kb on - strand, within Pf6N2E2_149 at 205.478 kb on + strand, within Pf6N2E2_149 at 205.479 kb on - strand, within Pf6N2E2_149 at 205.479 kb on - strand, within Pf6N2E2_149 at 205.479 kb on - strand, within Pf6N2E2_149 at 205.787 kb on + strand, within Pf6N2E2_149 at 205.787 kb on + strand, within Pf6N2E2_149 at 205.788 kb on - strand, within Pf6N2E2_149 at 205.788 kb on - strand, within Pf6N2E2_149 at 205.788 kb on - strand, within Pf6N2E2_149 at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.925 kb on + strand at 205.925 kb on + strand at 205.926 kb on - strand at 205.926 kb on - strand at 205.926 kb on - strand at 205.926 kb on - strand at 205.926 kb on - strand at 207.506 kb on - strand, within Pf6N2E2_152 at 207.646 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 205,340 + Pf6N2E2_149 0.55 +0.1 205,341 - Pf6N2E2_149 0.55 +1.2 205,478 + Pf6N2E2_149 0.64 -0.4 205,479 - Pf6N2E2_149 0.64 -0.9 205,479 - Pf6N2E2_149 0.64 -0.8 205,479 - Pf6N2E2_149 0.64 -0.6 205,787 + Pf6N2E2_149 0.84 +0.7 205,787 + Pf6N2E2_149 0.84 +1.2 205,788 - Pf6N2E2_149 0.84 +1.7 205,788 - Pf6N2E2_149 0.84 -0.6 205,788 - Pf6N2E2_149 0.84 +0.2 205,904 + -0.7 205,904 + +0.4 205,904 + -0.8 205,904 + -1.2 205,904 + -0.0 205,904 + -0.6 205,904 + -1.3 205,904 + -1.2 205,904 + -1.6 205,904 + -0.1 205,904 + -1.3 205,904 + +0.2 205,904 + +0.1 205,905 - -1.7 205,905 - +0.2 205,905 - +0.4 205,905 - +1.2 205,905 - +0.3 205,905 - +2.2 205,905 - +2.1 205,905 - +0.7 205,905 - -0.6 205,905 - +0.4 205,905 - +0.3 205,905 - -0.3 205,925 + -0.0 205,925 + +1.7 205,926 - +0.2 205,926 - -0.8 205,926 - +0.9 205,926 - +0.8 205,926 - -0.8 207,506 - Pf6N2E2_152 0.36 +0.3 207,646 + -0.2
Or see this region's nucleotide sequence