Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1335
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
1,570,509 | + | Pf6N2E2_1334 | 0.64 | -1.2 | |
1,570,950 | - | +0.8 | |||
1,570,967 | + | -0.2 | |||
1,570,967 | + | +0.3 | |||
1,571,224 | + | -0.2 | |||
1,571,224 | + | -1.2 | |||
1,571,225 | - | -0.5 | |||
1,571,243 | + | +0.8 | |||
1,571,350 | + | Pf6N2E2_1335 | 0.16 | -0.8 | |
1,571,480 | + | Pf6N2E2_1335 | 0.40 | +1.4 | |
1,571,480 | + | Pf6N2E2_1335 | 0.40 | -0.8 | |
1,571,545 | + | Pf6N2E2_1335 | 0.52 | -1.5 | |
1,571,595 | + | Pf6N2E2_1335 | 0.61 | +0.8 | |
1,571,744 | + | Pf6N2E2_1335 | 0.89 | -1.2 | |
1,571,828 | + | -0.2 | |||
1,571,829 | - | +0.6 | |||
1,571,865 | - | +0.8 | |||
1,571,865 | - | -0.8 | |||
1,572,053 | - | Pf6N2E2_1336 | 0.16 | -2.2 | |
1,572,111 | + | Pf6N2E2_1336 | 0.24 | -0.3 | |
1,572,112 | - | Pf6N2E2_1336 | 0.24 | -1.2 | |
1,572,237 | - | Pf6N2E2_1336 | 0.43 | +0.6 | |
1,572,400 | - | Pf6N2E2_1336 | 0.67 | +0.8 | |
1,572,658 | + | -0.0 | |||
1,572,658 | + | +0.8 | |||
1,572,658 | + | +0.1 |
Or see this region's nucleotide sequence