Experiment: Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17685 and BWI76_RS17690 are separated by 83 nucleotides BWI76_RS17690 and BWI76_RS17695 are separated by 102 nucleotides
BWI76_RS17685: BWI76_RS17685 - beta-glucosidase, at 3,673,729 to 3,676,509
_RS17685
BWI76_RS17690: BWI76_RS17690 - putative glycoporin, at 3,676,593 to 3,677,984
_RS17690
BWI76_RS17695: BWI76_RS17695 - MFS transporter, at 3,678,087 to 3,679,445
_RS17695
Position (kb)
3676
3677
3678 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3675.627 kb on - strand, within BWI76_RS17685 at 3675.839 kb on + strand, within BWI76_RS17685 at 3675.893 kb on + strand, within BWI76_RS17685 at 3675.893 kb on + strand, within BWI76_RS17685 at 3676.066 kb on + strand, within BWI76_RS17685 at 3676.066 kb on + strand, within BWI76_RS17685 at 3676.254 kb on + strand at 3676.397 kb on - strand at 3676.867 kb on - strand, within BWI76_RS17690 at 3676.945 kb on - strand, within BWI76_RS17690 at 3677.022 kb on - strand, within BWI76_RS17690 at 3677.196 kb on - strand, within BWI76_RS17690 at 3677.241 kb on - strand, within BWI76_RS17690 at 3677.390 kb on - strand, within BWI76_RS17690 at 3677.412 kb on - strand, within BWI76_RS17690 at 3677.457 kb on - strand, within BWI76_RS17690 at 3677.606 kb on - strand, within BWI76_RS17690 at 3677.645 kb on - strand, within BWI76_RS17690 at 3677.740 kb on - strand, within BWI76_RS17690 at 3677.768 kb on + strand, within BWI76_RS17690 at 3677.776 kb on - strand, within BWI76_RS17690 at 3677.817 kb on + strand, within BWI76_RS17690 at 3677.825 kb on - strand, within BWI76_RS17690 at 3677.847 kb on + strand at 3677.852 kb on + strand at 3677.855 kb on - strand at 3677.855 kb on - strand at 3677.863 kb on + strand at 3677.873 kb on + strand at 3677.882 kb on + strand at 3677.882 kb on + strand at 3677.883 kb on + strand at 3677.936 kb on - strand at 3677.938 kb on + strand at 3677.953 kb on + strand at 3677.961 kb on - strand at 3677.961 kb on - strand at 3678.017 kb on + strand at 3678.048 kb on - strand at 3678.074 kb on - strand at 3678.084 kb on - strand at 3678.084 kb on - strand at 3678.104 kb on - strand at 3678.104 kb on - strand at 3678.119 kb on - strand at 3678.119 kb on - strand at 3678.119 kb on - strand at 3678.119 kb on - strand at 3678.125 kb on - strand at 3678.208 kb on - strand at 3678.208 kb on - strand at 3678.208 kb on - strand at 3678.208 kb on - strand at 3678.221 kb on - strand at 3678.226 kb on + strand, within BWI76_RS17695 at 3678.228 kb on - strand, within BWI76_RS17695 at 3678.233 kb on - strand, within BWI76_RS17695 at 3678.233 kb on - strand, within BWI76_RS17695 at 3678.235 kb on + strand, within BWI76_RS17695 at 3678.243 kb on - strand at 3678.243 kb on - strand, within BWI76_RS17695 at 3678.243 kb on - strand, within BWI76_RS17695 at 3678.243 kb on - strand, within BWI76_RS17695 at 3678.243 kb on - strand, within BWI76_RS17695 at 3678.250 kb on + strand, within BWI76_RS17695 at 3678.251 kb on - strand, within BWI76_RS17695 at 3678.279 kb on + strand, within BWI76_RS17695 at 3678.280 kb on + strand, within BWI76_RS17695 at 3678.284 kb on + strand, within BWI76_RS17695 at 3678.287 kb on - strand, within BWI76_RS17695 at 3678.287 kb on - strand, within BWI76_RS17695 at 3678.287 kb on - strand, within BWI76_RS17695 at 3678.287 kb on - strand, within BWI76_RS17695 at 3678.287 kb on - strand, within BWI76_RS17695 at 3678.287 kb on - strand, within BWI76_RS17695 at 3678.287 kb on - strand at 3678.291 kb on + strand, within BWI76_RS17695 at 3678.291 kb on + strand, within BWI76_RS17695 at 3678.291 kb on + strand, within BWI76_RS17695 at 3678.299 kb on - strand, within BWI76_RS17695 at 3678.299 kb on - strand, within BWI76_RS17695 at 3678.299 kb on - strand, within BWI76_RS17695 at 3678.299 kb on - strand, within BWI76_RS17695 at 3678.299 kb on - strand, within BWI76_RS17695 at 3678.299 kb on - strand, within BWI76_RS17695 at 3678.299 kb on - strand, within BWI76_RS17695 at 3678.299 kb on - strand, within BWI76_RS17695 at 3678.301 kb on + strand, within BWI76_RS17695 at 3678.324 kb on - strand at 3678.359 kb on - strand, within BWI76_RS17695 at 3678.360 kb on + strand, within BWI76_RS17695 at 3678.369 kb on - strand, within BWI76_RS17695 at 3678.369 kb on - strand, within BWI76_RS17695 at 3678.369 kb on - strand, within BWI76_RS17695 at 3678.369 kb on - strand, within BWI76_RS17695 at 3678.401 kb on - strand, within BWI76_RS17695 at 3678.418 kb on - strand, within BWI76_RS17695 at 3678.418 kb on - strand, within BWI76_RS17695 at 3678.420 kb on + strand, within BWI76_RS17695 at 3678.423 kb on - strand, within BWI76_RS17695 at 3678.425 kb on - strand, within BWI76_RS17695 at 3678.428 kb on - strand, within BWI76_RS17695 at 3678.428 kb on - strand, within BWI76_RS17695 at 3678.508 kb on - strand, within BWI76_RS17695 at 3678.508 kb on - strand at 3678.521 kb on + strand, within BWI76_RS17695 at 3678.521 kb on + strand, within BWI76_RS17695 at 3678.521 kb on + strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.529 kb on - strand, within BWI76_RS17695 at 3678.534 kb on - strand, within BWI76_RS17695 at 3678.534 kb on - strand, within BWI76_RS17695 at 3678.534 kb on - strand, within BWI76_RS17695 at 3678.544 kb on - strand, within BWI76_RS17695 at 3678.544 kb on - strand, within BWI76_RS17695 at 3678.544 kb on - strand, within BWI76_RS17695 at 3678.544 kb on - strand, within BWI76_RS17695 at 3678.544 kb on - strand, within BWI76_RS17695 at 3678.561 kb on - strand, within BWI76_RS17695 at 3678.561 kb on - strand, within BWI76_RS17695 at 3678.588 kb on + strand at 3678.588 kb on + strand, within BWI76_RS17695 at 3678.596 kb on - strand, within BWI76_RS17695 at 3678.596 kb on - strand, within BWI76_RS17695 at 3678.596 kb on - strand, within BWI76_RS17695 at 3678.596 kb on - strand, within BWI76_RS17695 at 3678.596 kb on - strand, within BWI76_RS17695 at 3678.601 kb on - strand, within BWI76_RS17695 at 3678.608 kb on - strand, within BWI76_RS17695 at 3678.608 kb on - strand, within BWI76_RS17695 at 3678.655 kb on - strand, within BWI76_RS17695 at 3678.663 kb on - strand, within BWI76_RS17695 at 3678.684 kb on - strand, within BWI76_RS17695 at 3678.687 kb on - strand, within BWI76_RS17695 at 3678.687 kb on - strand, within BWI76_RS17695 at 3678.689 kb on - strand, within BWI76_RS17695 at 3678.689 kb on - strand, within BWI76_RS17695 at 3678.751 kb on - strand, within BWI76_RS17695 at 3678.758 kb on - strand, within BWI76_RS17695 at 3678.790 kb on + strand, within BWI76_RS17695 at 3678.835 kb on - strand, within BWI76_RS17695 at 3678.884 kb on - strand, within BWI76_RS17695 at 3678.891 kb on + strand at 3678.893 kb on + strand, within BWI76_RS17695 at 3678.901 kb on - strand, within BWI76_RS17695 at 3678.922 kb on - strand, within BWI76_RS17695 at 3678.922 kb on - strand, within BWI76_RS17695
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB remove 3,675,627 - BWI76_RS17685 0.68 -0.9 3,675,839 + BWI76_RS17685 0.76 +0.4 3,675,893 + BWI76_RS17685 0.78 -0.7 3,675,893 + BWI76_RS17685 0.78 +0.6 3,676,066 + BWI76_RS17685 0.84 -0.3 3,676,066 + BWI76_RS17685 0.84 +0.6 3,676,254 + -0.9 3,676,397 - -0.3 3,676,867 - BWI76_RS17690 0.20 +0.9 3,676,945 - BWI76_RS17690 0.25 -0.2 3,677,022 - BWI76_RS17690 0.31 +1.8 3,677,196 - BWI76_RS17690 0.43 +0.2 3,677,241 - BWI76_RS17690 0.47 +0.9 3,677,390 - BWI76_RS17690 0.57 -0.3 3,677,412 - BWI76_RS17690 0.59 +0.4 3,677,457 - BWI76_RS17690 0.62 -0.6 3,677,606 - BWI76_RS17690 0.73 +0.4 3,677,645 - BWI76_RS17690 0.76 -0.1 3,677,740 - BWI76_RS17690 0.82 +0.5 3,677,768 + BWI76_RS17690 0.84 +0.7 3,677,776 - BWI76_RS17690 0.85 -1.0 3,677,817 + BWI76_RS17690 0.88 +0.2 3,677,825 - BWI76_RS17690 0.89 -1.9 3,677,847 + -0.1 3,677,852 + -0.2 3,677,855 - -1.0 3,677,855 - -0.1 3,677,863 + +2.5 3,677,873 + -0.5 3,677,882 + +1.2 3,677,882 + -0.3 3,677,883 + -0.4 3,677,936 - +1.0 3,677,938 + +0.0 3,677,953 + -0.7 3,677,961 - +0.4 3,677,961 - +0.6 3,678,017 + -0.3 3,678,048 - +0.9 3,678,074 - -0.0 3,678,084 - +0.0 3,678,084 - -0.1 3,678,104 - -0.1 3,678,104 - -0.7 3,678,119 - +0.1 3,678,119 - -0.2 3,678,119 - +0.5 3,678,119 - -0.4 3,678,125 - +0.3 3,678,208 - +2.1 3,678,208 - +1.9 3,678,208 - -0.2 3,678,208 - +1.0 3,678,221 - +0.6 3,678,226 + BWI76_RS17695 0.10 -0.7 3,678,228 - BWI76_RS17695 0.10 +1.0 3,678,233 - BWI76_RS17695 0.11 -2.0 3,678,233 - BWI76_RS17695 0.11 -0.1 3,678,235 + BWI76_RS17695 0.11 -0.8 3,678,243 - -0.3 3,678,243 - BWI76_RS17695 0.11 +1.1 3,678,243 - BWI76_RS17695 0.11 -1.4 3,678,243 - BWI76_RS17695 0.11 +0.7 3,678,243 - BWI76_RS17695 0.11 -1.0 3,678,250 + BWI76_RS17695 0.12 -1.4 3,678,251 - BWI76_RS17695 0.12 -0.4 3,678,279 + BWI76_RS17695 0.14 -1.2 3,678,280 + BWI76_RS17695 0.14 +0.6 3,678,284 + BWI76_RS17695 0.14 -0.7 3,678,287 - BWI76_RS17695 0.15 -1.2 3,678,287 - BWI76_RS17695 0.15 -0.5 3,678,287 - BWI76_RS17695 0.15 -0.1 3,678,287 - BWI76_RS17695 0.15 -0.5 3,678,287 - BWI76_RS17695 0.15 +0.1 3,678,287 - BWI76_RS17695 0.15 -0.3 3,678,287 - +1.5 3,678,291 + BWI76_RS17695 0.15 +0.5 3,678,291 + BWI76_RS17695 0.15 +0.8 3,678,291 + BWI76_RS17695 0.15 +0.4 3,678,299 - BWI76_RS17695 0.16 -1.2 3,678,299 - BWI76_RS17695 0.16 -0.6 3,678,299 - BWI76_RS17695 0.16 +0.0 3,678,299 - BWI76_RS17695 0.16 -0.6 3,678,299 - BWI76_RS17695 0.16 -0.7 3,678,299 - BWI76_RS17695 0.16 -0.2 3,678,299 - BWI76_RS17695 0.16 +0.1 3,678,299 - BWI76_RS17695 0.16 +1.3 3,678,301 + BWI76_RS17695 0.16 -0.5 3,678,324 - +2.5 3,678,359 - BWI76_RS17695 0.20 +1.3 3,678,360 + BWI76_RS17695 0.20 +1.2 3,678,369 - BWI76_RS17695 0.21 +0.0 3,678,369 - BWI76_RS17695 0.21 +0.2 3,678,369 - BWI76_RS17695 0.21 -1.8 3,678,369 - BWI76_RS17695 0.21 -1.6 3,678,401 - BWI76_RS17695 0.23 -0.4 3,678,418 - BWI76_RS17695 0.24 -0.3 3,678,418 - BWI76_RS17695 0.24 +0.6 3,678,420 + BWI76_RS17695 0.25 -0.7 3,678,423 - BWI76_RS17695 0.25 +0.2 3,678,425 - BWI76_RS17695 0.25 -0.4 3,678,428 - BWI76_RS17695 0.25 +0.6 3,678,428 - BWI76_RS17695 0.25 -1.0 3,678,508 - BWI76_RS17695 0.31 +0.5 3,678,508 - +2.5 3,678,521 + BWI76_RS17695 0.32 +1.1 3,678,521 + BWI76_RS17695 0.32 +1.1 3,678,521 + BWI76_RS17695 0.32 -0.5 3,678,529 - BWI76_RS17695 0.33 -0.8 3,678,529 - BWI76_RS17695 0.33 -0.8 3,678,529 - BWI76_RS17695 0.33 +0.2 3,678,529 - BWI76_RS17695 0.33 -0.2 3,678,529 - BWI76_RS17695 0.33 +1.2 3,678,529 - BWI76_RS17695 0.33 -1.1 3,678,529 - BWI76_RS17695 0.33 -0.1 3,678,529 - BWI76_RS17695 0.33 +0.0 3,678,529 - BWI76_RS17695 0.33 +1.4 3,678,529 - BWI76_RS17695 0.33 +0.9 3,678,534 - BWI76_RS17695 0.33 +0.2 3,678,534 - BWI76_RS17695 0.33 -0.5 3,678,534 - BWI76_RS17695 0.33 +0.2 3,678,544 - BWI76_RS17695 0.34 +0.1 3,678,544 - BWI76_RS17695 0.34 -0.3 3,678,544 - BWI76_RS17695 0.34 -0.8 3,678,544 - BWI76_RS17695 0.34 +1.0 3,678,544 - BWI76_RS17695 0.34 -0.3 3,678,561 - BWI76_RS17695 0.35 -0.6 3,678,561 - BWI76_RS17695 0.35 +4.1 3,678,588 + +2.5 3,678,588 + BWI76_RS17695 0.37 -1.8 3,678,596 - BWI76_RS17695 0.37 +1.0 3,678,596 - BWI76_RS17695 0.37 -0.7 3,678,596 - BWI76_RS17695 0.37 -0.1 3,678,596 - BWI76_RS17695 0.37 +0.1 3,678,596 - BWI76_RS17695 0.37 -0.2 3,678,601 - BWI76_RS17695 0.38 +0.2 3,678,608 - BWI76_RS17695 0.38 +0.6 3,678,608 - BWI76_RS17695 0.38 +2.2 3,678,655 - BWI76_RS17695 0.42 -0.4 3,678,663 - BWI76_RS17695 0.42 -0.2 3,678,684 - BWI76_RS17695 0.44 -0.1 3,678,687 - BWI76_RS17695 0.44 -0.7 3,678,687 - BWI76_RS17695 0.44 -0.0 3,678,689 - BWI76_RS17695 0.44 +1.0 3,678,689 - BWI76_RS17695 0.44 -0.2 3,678,751 - BWI76_RS17695 0.49 +0.6 3,678,758 - BWI76_RS17695 0.49 +1.1 3,678,790 + BWI76_RS17695 0.52 +1.5 3,678,835 - BWI76_RS17695 0.55 +1.2 3,678,884 - BWI76_RS17695 0.59 -1.0 3,678,891 + +0.2 3,678,893 + BWI76_RS17695 0.59 +0.7 3,678,901 - BWI76_RS17695 0.60 +1.4 3,678,922 - BWI76_RS17695 0.61 -0.5 3,678,922 - BWI76_RS17695 0.61 +0.5
Or see this region's nucleotide sequence