Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25480 and BWI76_RS25485 are separated by 2 nucleotides BWI76_RS25485 and BWI76_RS25490 are separated by 7 nucleotides BWI76_RS25490 and BWI76_RS25495 overlap by 1 nucleotides
BWI76_RS25480: BWI76_RS25480 - ribonuclease E/G, at 5,296,898 to 5,298,367
_RS25480
BWI76_RS25485: BWI76_RS25485 - septum formation protein Maf, at 5,298,370 to 5,298,951
_RS25485
BWI76_RS25490: BWI76_RS25490 - rod shape-determining protein MreD, at 5,298,959 to 5,299,447
_RS25490
BWI76_RS25495: BWI76_RS25495 - rod shape-determining protein MreC, at 5,299,447 to 5,300,433
_RS25495
Position (kb) 5298
5299 Strain fitness (log2 ratio) -1
0
1 at 5297.525 kb on - strand, within BWI76_RS25480 at 5297.591 kb on - strand, within BWI76_RS25480 at 5297.593 kb on + strand, within BWI76_RS25480 at 5297.654 kb on + strand, within BWI76_RS25480 at 5297.865 kb on + strand, within BWI76_RS25480 at 5298.411 kb on + strand at 5298.870 kb on - strand, within BWI76_RS25485
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB remove 5,297,525 - BWI76_RS25480 0.43 -1.3 5,297,591 - BWI76_RS25480 0.47 -1.0 5,297,593 + BWI76_RS25480 0.47 -1.2 5,297,654 + BWI76_RS25480 0.51 -0.4 5,297,865 + BWI76_RS25480 0.66 -0.6 5,298,411 + +0.2 5,298,870 - BWI76_RS25485 0.86 +0.6
Or see this region's nucleotide sequence