Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14500 and BWI76_RS14505 are separated by 69 nucleotides BWI76_RS14505 and BWI76_RS14510 are separated by 27 nucleotides
BWI76_RS14500: BWI76_RS14500 - MFS transporter, at 3,027,047 to 3,028,438
_RS14500
BWI76_RS14505: BWI76_RS14505 - salicylate synthase Irp9, at 3,028,508 to 3,029,818
_RS14505
BWI76_RS14510: BWI76_RS14510 - MFS transporter, at 3,029,846 to 3,031,126
_RS14510
Position (kb)
3028
3029
3030 Strain fitness (log2 ratio)
-1
0
1 at 3027.675 kb on - strand, within BWI76_RS14500 at 3027.695 kb on - strand, within BWI76_RS14500 at 3027.707 kb on + strand, within BWI76_RS14500 at 3027.798 kb on - strand, within BWI76_RS14500 at 3027.852 kb on + strand, within BWI76_RS14500 at 3027.874 kb on + strand, within BWI76_RS14500 at 3028.049 kb on - strand, within BWI76_RS14500 at 3028.203 kb on - strand, within BWI76_RS14500 at 3028.251 kb on + strand, within BWI76_RS14500 at 3028.342 kb on + strand at 3028.426 kb on - strand at 3028.527 kb on - strand at 3028.527 kb on - strand at 3028.565 kb on - strand at 3028.983 kb on - strand, within BWI76_RS14505 at 3029.349 kb on - strand, within BWI76_RS14505 at 3029.734 kb on - strand at 3030.343 kb on - strand, within BWI76_RS14510 at 3030.519 kb on + strand, within BWI76_RS14510 at 3030.530 kb on + strand, within BWI76_RS14510 at 3030.653 kb on + strand, within BWI76_RS14510 at 3030.661 kb on - strand, within BWI76_RS14510
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB remove 3,027,675 - BWI76_RS14500 0.45 -0.1 3,027,695 - BWI76_RS14500 0.47 -0.5 3,027,707 + BWI76_RS14500 0.47 +0.9 3,027,798 - BWI76_RS14500 0.54 -0.1 3,027,852 + BWI76_RS14500 0.58 -0.8 3,027,874 + BWI76_RS14500 0.59 -0.8 3,028,049 - BWI76_RS14500 0.72 -1.5 3,028,203 - BWI76_RS14500 0.83 +0.1 3,028,251 + BWI76_RS14500 0.86 -1.0 3,028,342 + -0.6 3,028,426 - -1.2 3,028,527 - -0.5 3,028,527 - -0.0 3,028,565 - -0.2 3,028,983 - BWI76_RS14505 0.36 -1.3 3,029,349 - BWI76_RS14505 0.64 -0.8 3,029,734 - +0.1 3,030,343 - BWI76_RS14510 0.39 +0.0 3,030,519 + BWI76_RS14510 0.53 +0.6 3,030,530 + BWI76_RS14510 0.53 +0.4 3,030,653 + BWI76_RS14510 0.63 -0.4 3,030,661 - BWI76_RS14510 0.64 -0.2
Or see this region's nucleotide sequence