Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27435
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X |
---|---|---|---|---|---|
remove | |||||
5,691,447 | - | BWI76_RS27430 | 0.71 | -3.2 | |
5,691,721 | - | BWI76_RS27430 | 0.84 | -1.0 | |
5,691,896 | + | -0.6 | |||
5,692,004 | - | -3.0 | |||
5,692,139 | + | -0.0 | |||
5,692,287 | + | BWI76_RS27435 | 0.31 | -0.6 | |
5,692,295 | - | BWI76_RS27435 | 0.32 | -3.4 | |
5,692,295 | - | BWI76_RS27435 | 0.32 | -3.6 | |
5,692,333 | + | BWI76_RS27435 | 0.38 | -2.7 | |
5,692,333 | + | BWI76_RS27435 | 0.38 | -1.7 | |
5,692,420 | - | BWI76_RS27435 | 0.50 | -1.8 | |
5,692,471 | + | BWI76_RS27435 | 0.58 | +0.1 | |
5,692,545 | + | BWI76_RS27435 | 0.69 | -0.1 | |
5,692,553 | - | BWI76_RS27435 | 0.70 | -4.3 | |
5,692,605 | + | BWI76_RS27435 | 0.77 | -0.9 | |
5,692,678 | + | BWI76_RS27435 | 0.88 | -3.2 | |
5,692,868 | - | -3.4 | |||
5,693,250 | - | BWI76_RS27440 | 0.23 | -1.5 | |
5,693,383 | + | BWI76_RS27440 | 0.30 | -3.6 | |
5,693,391 | - | BWI76_RS27440 | 0.30 | -1.4 | |
5,693,506 | + | BWI76_RS27440 | 0.36 | -2.2 |
Or see this region's nucleotide sequence