Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20205

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,233,470	-		BWI76_RS20200	0.88	-0.7
4,233,472	-		BWI76_RS20200	0.89	+0.2
4,233,532	-				+0.5
4,233,532	-				+1.0
4,233,532	-				-0.7
4,233,594	-				+0.1
4,233,594	-				-0.3
4,233,594	-				+0.3
4,233,601	+				-1.7
4,233,601	+				+0.6
4,233,601	+				+0.5
4,233,601	+				+0.6
4,233,601	+				+0.9
4,233,601	+				+0.1
4,233,604	-				-0.2
4,233,604	-				+0.8
4,233,604	-				-2.1
4,233,604	-				-1.5
4,233,604	-				+0.8
4,233,609	-				-1.0
4,233,614	-				+0.1
4,233,615	+				+0.6
4,233,634	-				-1.7
4,233,635	-				-0.8
4,233,646	+				+1.0
4,233,646	+				-1.7
4,233,646	+				-0.1
4,233,646	+				-0.2
4,233,646	+				+0.5
4,233,646	+				-0.7
4,233,647	+				+0.1
4,233,654	-				-0.6
4,233,654	-				+0.9
4,233,654	-				-0.2
4,233,654	-				+1.6
4,233,654	-				-0.2
4,233,654	-				+0.7
4,233,654	-				-0.5
4,233,654	-				-1.0
4,233,654	-				-0.0
4,233,654	-				-0.5
4,233,654	-				+0.7
4,233,654	-				-0.7
4,233,654	-				-0.2
4,233,654	-				-0.7
4,233,675	-				-1.5
4,233,675	-				-1.6
4,233,675	-				-1.1
4,233,680	-				+0.2
4,233,721	+				+0.0
4,233,724	-				-0.3
4,233,724	-				-2.0
4,233,724	-				-0.3
4,233,725	-				-0.0
4,233,735	-				-2.6
4,233,735	-				-0.5
4,233,740	+				-1.5
4,233,770	-				-0.0
4,233,777	-				-0.3
4,233,828	+				+0.4
4,233,838	-				-1.3
4,233,840	+				-0.5
4,233,840	+				+1.4
4,233,840	+				-2.0
4,233,848	-				-1.1
4,233,848	-				+1.6
4,233,862	+				+0.1
4,233,864	-				+0.5
4,233,905	+				-0.4
4,233,930	+				+1.2
4,233,934	+				-2.8
4,233,938	-				+1.6
4,233,940	+				+2.0
4,233,940	+				-0.1
4,233,940	+				-1.1
4,233,942	-				+0.3
4,233,948	-				+0.7
4,233,948	-				+0.1
4,233,948	-				+1.1
4,233,948	-				-3.1
4,233,948	-				-0.2
4,233,948	-				-0.1
4,233,948	-				+1.5
4,233,960	+				-0.1
4,233,968	-				-1.3
4,234,002	-				+0.3
4,234,004	+				-0.1
4,234,004	+				-1.0
4,234,004	+				-0.2
4,234,012	-				-0.5
4,234,012	-				-0.2
4,234,012	-				-0.2
4,234,012	-				-1.5
4,234,012	-				-0.4
4,234,012	-				+0.2
4,234,012	-				+0.8
4,234,086	-				-0.6
4,234,086	-				-0.5
4,234,086	-				-0.7
4,234,153	-				+0.7
4,234,177	-				-2.0
4,234,377	-				+0.1
4,234,402	+				-2.3
4,234,404	+				+1.1
4,234,404	+				+1.7
4,234,410	-				+0.6
4,234,414	+				+2.3
4,234,442	-				-0.4
4,234,460	+				+0.1
4,234,468	-				+0.2
4,234,468	-				-0.2
4,234,468	-				-0.2
4,234,509	-				-0.8
4,234,512	-				-1.4
4,234,534	-				+0.7
4,234,648	+		BWI76_RS20205	0.15	-2.7
4,234,664	+		BWI76_RS20205	0.16	-2.2
4,234,666	-		BWI76_RS20205	0.16	-0.4
4,234,705	-		BWI76_RS20205	0.20	+0.0
4,234,908	+		BWI76_RS20205	0.36	-2.2
4,235,130	-		BWI76_RS20205	0.55	+0.2
4,235,207	+		BWI76_RS20205	0.61	-0.3
4,235,291	-		BWI76_RS20205	0.68	+1.3
4,235,390	-		BWI76_RS20205	0.76	+0.0
4,235,442	-		BWI76_RS20205	0.80	+0.6
4,235,459	+		BWI76_RS20205	0.82	+0.9
4,235,459	+		BWI76_RS20205	0.82	-0.1
4,235,757	+				-0.4
4,235,757	+				+0.3
4,235,872	-		BWI76_RS20210	0.17	+1.1
4,235,935	+		BWI76_RS20210	0.27	-0.2
4,235,943	-		BWI76_RS20210	0.29	-0.7
4,235,943	-		BWI76_RS20210	0.29	+0.9
4,235,943	-		BWI76_RS20210	0.29	-0.1
4,236,053	-		BWI76_RS20210	0.47	-0.2
4,236,285	+		BWI76_RS20210	0.86	-0.8
4,236,290	+		BWI76_RS20210	0.86	-0.6
4,236,390	+				-1.3
4,236,458	+				-0.8
4,236,619	-		BWI76_RS20215	0.11	-0.5