Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17055
Experiment: Vogels_fungal_media; pH 5.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vogels_fungal_media; pH 5.5 |
---|---|---|---|---|---|
remove | |||||
3,537,675 | - | BWI76_RS17050 | 0.78 | -0.7 | |
3,537,685 | + | BWI76_RS17050 | 0.79 | -1.5 | |
3,537,858 | - | BWI76_RS17050 | 0.84 | -1.2 | |
3,537,880 | + | BWI76_RS17050 | 0.85 | -1.5 | |
3,538,096 | - | -0.9 | |||
3,538,096 | - | -0.2 | |||
3,538,214 | + | -0.9 | |||
3,538,214 | + | -1.2 | |||
3,538,372 | + | -0.8 | |||
3,538,487 | + | +0.4 | |||
3,538,524 | + | -0.5 | |||
3,538,574 | + | -0.1 | |||
3,538,643 | - | +0.0 | |||
3,538,665 | - | BWI76_RS17055 | 0.11 | +1.7 | |
3,538,813 | - | BWI76_RS17055 | 0.25 | +1.6 | |
3,538,896 | + | BWI76_RS17055 | 0.32 | +0.5 | |
3,538,903 | + | BWI76_RS17055 | 0.33 | -0.6 | |
3,538,903 | + | BWI76_RS17055 | 0.33 | -2.0 | |
3,538,911 | - | BWI76_RS17055 | 0.33 | -0.4 | |
3,539,053 | + | BWI76_RS17055 | 0.46 | +0.2 | |
3,539,214 | - | BWI76_RS17055 | 0.60 | +0.1 | |
3,539,214 | - | BWI76_RS17055 | 0.60 | -0.7 | |
3,539,232 | + | BWI76_RS17055 | 0.62 | +0.4 | |
3,539,240 | - | BWI76_RS17055 | 0.63 | -2.1 | |
3,539,325 | - | BWI76_RS17055 | 0.70 | +0.0 | |
3,539,439 | - | BWI76_RS17055 | 0.80 | +0.2 | |
3,539,555 | - | -0.4 | |||
3,539,569 | + | +0.1 | |||
3,539,706 | - | -0.1 | |||
3,539,940 | + | +1.3 | |||
3,539,940 | + | +0.6 | |||
3,540,597 | - | BWI76_RS17065 | 0.23 | -0.9 |
Or see this region's nucleotide sequence