Experiment: Vogels_fungal_media; pH 5.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25430 and BWI76_RS25435 are separated by 103 nucleotides BWI76_RS25435 and BWI76_RS25440 are separated by 50 nucleotides BWI76_RS25440 and BWI76_RS25445 are separated by 140 nucleotides
BWI76_RS25430: BWI76_RS25430 - membrane protein, at 5,285,409 to 5,285,672
_RS25430
BWI76_RS25435: BWI76_RS25435 - membrane protein, at 5,285,776 to 5,286,042
_RS25435
BWI76_RS25440: BWI76_RS25440 - putative barnase inhibitor, at 5,286,093 to 5,286,368
_RS25440
BWI76_RS25445: BWI76_RS25445 - p-hydroxybenzoic acid efflux pump subunit AaeB, at 5,286,509 to 5,288,476
_RS25445
Position (kb) 5286
5287 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5285.498 kb on + strand, within BWI76_RS25430 at 5285.498 kb on + strand, within BWI76_RS25430 at 5285.506 kb on - strand, within BWI76_RS25430 at 5285.507 kb on - strand, within BWI76_RS25430 at 5285.545 kb on + strand, within BWI76_RS25430 at 5285.620 kb on + strand, within BWI76_RS25430 at 5285.632 kb on + strand, within BWI76_RS25430 at 5285.637 kb on + strand, within BWI76_RS25430 at 5285.717 kb on - strand at 5285.811 kb on + strand, within BWI76_RS25435 at 5285.891 kb on - strand, within BWI76_RS25435 at 5285.908 kb on + strand, within BWI76_RS25435 at 5286.018 kb on + strand at 5286.144 kb on - strand, within BWI76_RS25440 at 5286.144 kb on - strand, within BWI76_RS25440 at 5286.166 kb on - strand, within BWI76_RS25440 at 5286.241 kb on - strand, within BWI76_RS25440 at 5286.255 kb on - strand at 5286.268 kb on - strand, within BWI76_RS25440 at 5286.290 kb on + strand, within BWI76_RS25440 at 5286.298 kb on - strand, within BWI76_RS25440 at 5286.379 kb on - strand at 5286.420 kb on + strand at 5286.457 kb on + strand at 5286.591 kb on + strand at 5286.591 kb on + strand at 5286.953 kb on - strand, within BWI76_RS25445 at 5287.103 kb on - strand, within BWI76_RS25445
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media; pH 5.5 remove 5,285,498 + BWI76_RS25430 0.34 -1.5 5,285,498 + BWI76_RS25430 0.34 +0.3 5,285,506 - BWI76_RS25430 0.37 +0.2 5,285,507 - BWI76_RS25430 0.37 -0.4 5,285,545 + BWI76_RS25430 0.52 -0.2 5,285,620 + BWI76_RS25430 0.80 -0.2 5,285,632 + BWI76_RS25430 0.84 +0.1 5,285,637 + BWI76_RS25430 0.86 +1.0 5,285,717 - -0.7 5,285,811 + BWI76_RS25435 0.13 -0.7 5,285,891 - BWI76_RS25435 0.43 +0.4 5,285,908 + BWI76_RS25435 0.49 -2.3 5,286,018 + -1.4 5,286,144 - BWI76_RS25440 0.18 +0.2 5,286,144 - BWI76_RS25440 0.18 +0.2 5,286,166 - BWI76_RS25440 0.26 +0.0 5,286,241 - BWI76_RS25440 0.54 +0.0 5,286,255 - -0.1 5,286,268 - BWI76_RS25440 0.63 +0.3 5,286,290 + BWI76_RS25440 0.71 +1.1 5,286,298 - BWI76_RS25440 0.74 +1.3 5,286,379 - -1.0 5,286,420 + -0.2 5,286,457 + -0.2 5,286,591 + -0.2 5,286,591 + +3.8 5,286,953 - BWI76_RS25445 0.23 -3.1 5,287,103 - BWI76_RS25445 0.30 -0.0
Or see this region's nucleotide sequence