Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15125

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,169,629	-				-1.8
3,169,629	-				-0.7
3,169,629	-				-0.5
3,169,629	-				-1.9
3,169,629	-				-0.9
3,169,629	-				-0.5
3,169,629	-				-2.7
3,169,640	-				-2.8
3,169,640	-				-0.9
3,169,640	-				-0.7
3,169,678	+				-0.5
3,169,684	-				+0.5
3,169,686	-				-3.2
3,169,686	-				-1.6
3,169,741	-				-0.7
3,169,741	-				-0.5
3,169,977	-				-0.4
3,170,019	+				+0.4
3,170,019	+				-1.6
3,170,019	+				+0.6
3,170,019	+				+0.8
3,170,019	+				-2.2
3,170,019	+				-2.5
3,170,019	+				-1.1
3,170,019	-				-1.0
3,170,026	+				-1.2
3,170,026	+				+3.1
3,170,031	+				+2.1
3,170,031	+				-1.6
3,170,034	-				-2.1
3,170,034	-				+1.6
3,170,039	-				+0.7
3,170,051	-				+0.9
3,170,213	+				-0.2
3,170,300	+				+2.1
3,170,346	+				-0.9
3,170,402	+				-1.1
3,170,402	+				-1.2
3,170,402	+				+0.5
3,170,410	-				-0.9
3,170,410	-				+1.6
3,170,410	-				+1.0
3,170,410	-				-0.9
3,170,410	-				-0.0
3,170,418	-				+0.3
3,170,422	+				-1.4
3,170,422	+				-1.0
3,170,423	-				-2.7
3,170,430	-		BWI76_RS15120	0.11	-0.0
3,170,439	-		BWI76_RS15120	0.16	+0.9
3,170,445	-				-1.0
3,170,496	-		BWI76_RS15120	0.42	-0.4
3,170,511	+		BWI76_RS15120	0.48	+1.2
3,170,519	-				-0.5
3,170,548	-		BWI76_RS15120	0.65	+0.4
3,170,625	+				+0.8
3,170,633	-				-0.2
3,170,655	-				+0.9
3,170,707	-		BWI76_RS15125	0.16	-1.0
3,170,814	-		BWI76_RS15125	0.34	-1.2
3,170,822	-		BWI76_RS15125	0.35	-2.9
3,170,880	+		BWI76_RS15125	0.45	-2.5
3,170,991	+		BWI76_RS15125	0.65	-1.1
3,171,183	-				+1.6
3,171,359	+		BWI76_RS15130	0.37	-0.5
3,171,413	-		BWI76_RS15130	0.49	-0.7
3,171,745	-				+0.4
3,171,904	-				+0.3
3,172,060	-		BWI76_RS15135	0.42	+0.4
3,172,090	-		BWI76_RS15135	0.52	-3.3
3,172,159	+		BWI76_RS15135	0.76	-0.5
3,172,167	-		BWI76_RS15135	0.78	+0.0