Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23225
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X |
---|---|---|---|---|---|
remove | |||||
4,837,458 | - | BWI76_RS23220 | 0.28 | -1.3 | |
4,837,462 | - | BWI76_RS23220 | 0.29 | -4.5 | |
4,837,491 | + | BWI76_RS23220 | 0.31 | -2.8 | |
4,837,491 | + | BWI76_RS23220 | 0.31 | -3.5 | |
4,837,499 | - | BWI76_RS23220 | 0.31 | -3.0 | |
4,837,499 | - | BWI76_RS23220 | 0.31 | -3.4 | |
4,837,631 | + | BWI76_RS23220 | 0.41 | -2.5 | |
4,837,644 | - | BWI76_RS23220 | 0.42 | -3.6 | |
4,838,047 | - | BWI76_RS23220 | 0.73 | -2.2 | |
4,838,141 | - | BWI76_RS23220 | 0.80 | -2.8 | |
4,838,516 | + | -0.2 | |||
4,838,516 | + | +0.2 | |||
4,838,561 | + | -0.0 | |||
4,838,624 | - | +1.0 | |||
4,838,649 | - | BWI76_RS23225 | 0.11 | +0.7 | |
4,838,700 | + | BWI76_RS23225 | 0.13 | -1.1 | |
4,839,068 | - | BWI76_RS23225 | 0.33 | -0.7 | |
4,839,150 | - | BWI76_RS23225 | 0.38 | -0.3 | |
4,839,411 | + | BWI76_RS23225 | 0.52 | +2.5 | |
4,839,713 | - | BWI76_RS23225 | 0.69 | -0.7 | |
4,839,788 | + | BWI76_RS23225 | 0.73 | -0.3 | |
4,839,951 | + | BWI76_RS23225 | 0.82 | -0.1 | |
4,839,951 | + | BWI76_RS23225 | 0.82 | +0.4 | |
4,840,660 | - | BWI76_RS23230 | 0.11 | +0.4 | |
4,841,007 | - | BWI76_RS23230 | 0.20 | -0.6 |
Or see this region's nucleotide sequence