Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11845
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X |
---|---|---|---|---|---|
remove | |||||
2,488,873 | - | BWI76_RS11835 | 0.88 | -2.6 | |
2,489,110 | + | BWI76_RS11840 | 0.19 | -0.5 | |
2,489,118 | - | BWI76_RS11840 | 0.20 | -2.9 | |
2,489,335 | - | BWI76_RS11840 | 0.46 | -0.1 | |
2,489,732 | + | -1.1 | |||
2,489,811 | + | -4.3 | |||
2,490,020 | - | BWI76_RS11845 | 0.21 | -0.7 | |
2,490,126 | + | BWI76_RS11845 | 0.30 | -3.0 | |
2,490,913 | + | -1.5 | |||
2,490,932 | + | -0.9 | |||
2,490,937 | + | -3.2 | |||
2,490,955 | + | -2.2 | |||
2,491,046 | - | -3.9 | |||
2,491,136 | + | BWI76_RS11850 | 0.12 | -2.5 | |
2,491,136 | + | BWI76_RS11850 | 0.12 | -2.1 | |
2,491,324 | - | BWI76_RS11850 | 0.26 | -3.1 | |
2,491,426 | - | BWI76_RS11850 | 0.33 | -2.8 | |
2,491,542 | + | BWI76_RS11850 | 0.42 | -2.5 | |
2,491,601 | - | BWI76_RS11850 | 0.46 | -1.6 | |
2,491,672 | - | BWI76_RS11850 | 0.52 | -2.5 | |
2,491,712 | - | BWI76_RS11850 | 0.54 | -2.3 | |
2,491,732 | - | BWI76_RS11850 | 0.56 | -3.2 | |
2,491,855 | + | BWI76_RS11850 | 0.65 | -2.0 |
Or see this region's nucleotide sequence