Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10450

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,208,134	-		BWI76_RS10440	0.85	-0.5
2,208,164	+		BWI76_RS10440	0.87	+0.4
2,208,269	+				-0.4
2,208,282	-				+0.1
2,208,357	-				+0.0
2,208,532	+		BWI76_RS10445	0.13	+0.1
2,208,701	-		BWI76_RS10445	0.58	-0.0
2,208,741	-		BWI76_RS10445	0.68	-0.0
2,208,846	+				-0.8
2,208,854	-				-0.2
2,208,953	+				-0.1
2,208,953	+				-0.2
2,208,961	-				-0.5
2,208,961	-				+0.8
2,208,961	-				+0.9
2,208,963	+				-0.9
2,209,081	-				+0.6
2,209,112	-		BWI76_RS10450	0.15	-1.5
2,209,112	-		BWI76_RS10450	0.15	-1.5
2,209,145	-				+0.8
2,209,145	-		BWI76_RS10450	0.59	-0.3
2,209,152	+		BWI76_RS10450	0.68	-2.3
2,209,190	+				+0.7
2,209,237	+				+0.4
2,209,245	-				-0.3
2,209,326	+				+0.3
2,209,334	-				-1.0
2,209,337	+				+0.6
2,209,337	+				-0.4
2,209,337	+				+0.1
2,209,337	+				-1.3
2,209,345	-				-1.0
2,209,345	-				+0.3
2,209,345	-				-0.6
2,209,345	-				+0.1
2,209,347	+				-3.3
2,209,355	-				+0.1
2,209,395	+				-0.9
2,209,402	-				-0.8
2,209,445	-				+0.4
2,209,484	+				+0.9
2,209,492	-				-0.4
2,209,492	-				-0.1
2,209,492	-				+0.2
2,209,494	+				-0.3
2,209,494	+				+0.1
2,209,554	+		BWI76_RS10455	0.15	+0.0
2,209,562	-		BWI76_RS10455	0.19	-1.4
2,209,562	-		BWI76_RS10455	0.19	-0.1
2,209,573	+				+0.6
2,209,623	+		BWI76_RS10455	0.49	-1.2
2,209,632	+		BWI76_RS10455	0.53	-0.4
2,209,637	+		BWI76_RS10455	0.56	-1.4
2,209,657	+		BWI76_RS10455	0.65	-0.2
2,209,696	+		BWI76_RS10455	0.84	+0.6
2,209,696	+		BWI76_RS10455	0.84	+0.3
2,209,702	+		BWI76_RS10455	0.87	+0.5
2,209,702	+		BWI76_RS10455	0.87	-0.3
2,209,702	+		BWI76_RS10455	0.87	+0.3
2,209,703	-		BWI76_RS10455	0.87	-0.1
2,209,710	-				+0.1
2,209,710	-				-0.5
2,209,710	-				+0.8
2,209,718	-				-0.4
2,209,741	+				-0.2
2,209,744	+				-1.0
2,209,744	+				+0.1
2,209,774	-				-0.4
2,209,778	+				+0.2
2,209,778	+				-0.7
2,209,809	+				+0.2
2,209,820	+				-0.1
2,209,866	-		BWI76_RS10460	0.12	+0.9
2,209,869	+		BWI76_RS10460	0.13	+0.7
2,209,896	+		BWI76_RS10460	0.15	+0.9
2,209,898	-		BWI76_RS10460	0.16	+1.2
2,209,997	+		BWI76_RS10460	0.26	+0.8
2,210,088	+		BWI76_RS10460	0.36	-0.1
2,210,096	-		BWI76_RS10460	0.36	+0.2
2,210,171	+		BWI76_RS10460	0.44	-0.7