Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24455 and BWI76_RS24460 are separated by 58 nucleotides BWI76_RS24460 and BWI76_RS24465 are separated by 23 nucleotides
BWI76_RS24455: BWI76_RS24455 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase, at 5,097,884 to 5,099,317
_RS24455
BWI76_RS24460: BWI76_RS24460 - bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase, at 5,099,376 to 5,102,210
_RS24460
BWI76_RS24465: BWI76_RS24465 - adenylate cyclase, at 5,102,234 to 5,103,532
_RS24465
Position (kb)
5099
5100
5101
5102
5103 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5099.498 kb on - strand at 5099.550 kb on - strand at 5099.550 kb on - strand at 5099.627 kb on - strand at 5099.872 kb on + strand, within BWI76_RS24460 at 5100.118 kb on + strand, within BWI76_RS24460 at 5100.281 kb on - strand, within BWI76_RS24460 at 5100.584 kb on + strand, within BWI76_RS24460 at 5100.735 kb on - strand, within BWI76_RS24460 at 5101.134 kb on + strand, within BWI76_RS24460 at 5101.472 kb on - strand, within BWI76_RS24460 at 5101.566 kb on + strand, within BWI76_RS24460 at 5101.612 kb on - strand, within BWI76_RS24460 at 5101.815 kb on - strand, within BWI76_RS24460 at 5101.862 kb on + strand, within BWI76_RS24460 at 5101.862 kb on + strand, within BWI76_RS24460 at 5101.862 kb on + strand, within BWI76_RS24460 at 5101.870 kb on - strand, within BWI76_RS24460 at 5101.870 kb on - strand, within BWI76_RS24460 at 5101.870 kb on - strand, within BWI76_RS24460 at 5102.171 kb on - strand at 5102.330 kb on + strand at 5102.359 kb on + strand at 5102.444 kb on - strand, within BWI76_RS24465 at 5102.514 kb on + strand, within BWI76_RS24465 at 5102.925 kb on + strand, within BWI76_RS24465 at 5102.996 kb on - strand, within BWI76_RS24465 at 5103.013 kb on + strand, within BWI76_RS24465 at 5103.021 kb on - strand, within BWI76_RS24465
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X remove 5,099,498 - -0.9 5,099,550 - -1.5 5,099,550 - -2.1 5,099,627 - -0.1 5,099,872 + BWI76_RS24460 0.17 -1.8 5,100,118 + BWI76_RS24460 0.26 -0.4 5,100,281 - BWI76_RS24460 0.32 -0.4 5,100,584 + BWI76_RS24460 0.43 -0.8 5,100,735 - BWI76_RS24460 0.48 -2.8 5,101,134 + BWI76_RS24460 0.62 -1.2 5,101,472 - BWI76_RS24460 0.74 -1.0 5,101,566 + BWI76_RS24460 0.77 -2.7 5,101,612 - BWI76_RS24460 0.79 -1.5 5,101,815 - BWI76_RS24460 0.86 -1.7 5,101,862 + BWI76_RS24460 0.88 -1.3 5,101,862 + BWI76_RS24460 0.88 -0.1 5,101,862 + BWI76_RS24460 0.88 -1.1 5,101,870 - BWI76_RS24460 0.88 -2.9 5,101,870 - BWI76_RS24460 0.88 -1.0 5,101,870 - BWI76_RS24460 0.88 -0.7 5,102,171 - -1.3 5,102,330 + -1.1 5,102,359 + +0.9 5,102,444 - BWI76_RS24465 0.16 +0.3 5,102,514 + BWI76_RS24465 0.22 +0.8 5,102,925 + BWI76_RS24465 0.53 -1.0 5,102,996 - BWI76_RS24465 0.59 +0.2 5,103,013 + BWI76_RS24465 0.60 +0.2 5,103,021 - BWI76_RS24465 0.61 -3.0
Or see this region's nucleotide sequence