Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13695

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,857,252	+				+0.4
2,857,306	+		BWI76_RS13690	0.24	-0.1
2,857,314	-		BWI76_RS13690	0.25	+0.7
2,857,323	+		BWI76_RS13690	0.26	+1.0
2,857,379	+		BWI76_RS13690	0.31	-0.0
2,857,387	-		BWI76_RS13690	0.31	-0.1
2,857,387	-		BWI76_RS13690	0.31	-1.3
2,857,412	+		BWI76_RS13690	0.34	-0.2
2,857,457	+		BWI76_RS13690	0.38	+1.3
2,857,721	+				-1.2
2,857,729	-		BWI76_RS13690	0.62	-0.1
2,857,889	+		BWI76_RS13690	0.76	+0.2
2,857,978	+		BWI76_RS13690	0.84	-0.2
2,857,978	+		BWI76_RS13690	0.84	+0.1
2,857,978	+		BWI76_RS13690	0.84	-0.8
2,858,003	-		BWI76_RS13690	0.87	-0.5
2,858,022	+		BWI76_RS13690	0.88	-0.2
2,858,059	+				+2.9
2,858,067	-				+0.4
2,858,077	-				-0.2
2,858,082	-				-0.8
2,858,082	-				-0.4
2,858,100	-				+0.2
2,858,104	+				+0.1
2,858,104	+				-1.4
2,858,104	+				-0.2
2,858,104	+				+0.3
2,858,104	+				+0.5
2,858,104	+				-1.5
2,858,112	-				+0.8
2,858,112	-				-0.2
2,858,114	+				+0.5
2,858,115	+				-0.9
2,858,117	-				-0.8
2,858,122	-				-0.9
2,858,123	-				+0.2
2,858,123	-				-1.3
2,858,148	+				+0.6
2,858,148	+				-1.0
2,858,148	+				-1.0
2,858,156	-				+0.6
2,858,156	-				+0.5
2,858,156	-				-1.4
2,858,156	-				+0.1
2,858,156	-				-0.2
2,858,156	-				-0.4
2,858,156	-				+0.3
2,858,156	-				-0.3
2,858,167	-				-1.5
2,858,171	+				-2.2
2,858,179	-				+0.1
2,858,230	+		BWI76_RS13695	0.22	+1.0
2,858,238	-		BWI76_RS13695	0.25	-2.0
2,858,264	+		BWI76_RS13695	0.34	+0.7
2,858,270	+		BWI76_RS13695	0.36	-0.7
2,858,270	+		BWI76_RS13695	0.36	+1.0
2,858,278	-		BWI76_RS13695	0.38	+1.1
2,858,310	+		BWI76_RS13695	0.49	+0.8
2,858,419	+		BWI76_RS13695	0.87	+1.9
2,858,419	+		BWI76_RS13695	0.87	+0.7
2,858,419	+		BWI76_RS13695	0.87	-0.2
2,858,419	+		BWI76_RS13695	0.87	-1.0
2,858,419	+		BWI76_RS13695	0.87	+0.7
2,858,419	+		BWI76_RS13695	0.87	+0.2
2,858,419	+		BWI76_RS13695	0.87	-0.9
2,858,419	+		BWI76_RS13695	0.87	-1.2
2,858,419	+				+2.7
2,858,419	+		BWI76_RS13695	0.87	-0.3
2,858,419	+		BWI76_RS13695	0.87	+0.1
2,858,419	+		BWI76_RS13695	0.87	-1.2
2,858,419	+		BWI76_RS13695	0.87	+0.1
2,858,419	+		BWI76_RS13695	0.87	+0.8
2,858,419	+		BWI76_RS13695	0.87	-1.2
2,858,421	+		BWI76_RS13695	0.88	+1.0
2,858,421	+		BWI76_RS13695	0.88	-1.8
2,858,547	+				-1.7
2,858,547	+				+0.1
2,858,547	+				-0.6
2,858,547	+				-2.3
2,858,547	+				-0.2
2,858,547	+				+1.9
2,858,555	-				-0.3
2,858,645	-		BWI76_RS13700	0.13	-0.7
2,858,665	+		BWI76_RS13700	0.15	-0.6
2,858,678	+		BWI76_RS13700	0.16	-1.2
2,858,686	+		BWI76_RS13700	0.17	+1.6
2,858,688	+		BWI76_RS13700	0.17	-0.6
2,858,694	-		BWI76_RS13700	0.18	-2.4
2,858,696	-		BWI76_RS13700	0.18	-2.0
2,858,745	+		BWI76_RS13700	0.24	-2.1
2,858,762	+		BWI76_RS13700	0.25	-0.6
2,858,764	-		BWI76_RS13700	0.26	-2.7
2,858,772	-		BWI76_RS13700	0.26	-0.6
2,858,774	+		BWI76_RS13700	0.27	-0.1
2,858,782	-		BWI76_RS13700	0.28	+1.6
2,858,787	-		BWI76_RS13700	0.28	+1.7
2,858,882	-		BWI76_RS13700	0.38	-1.2
2,858,940	+		BWI76_RS13700	0.45	-2.6
2,858,950	+		BWI76_RS13700	0.46	-1.5
2,858,958	-		BWI76_RS13700	0.46	+0.3
2,858,996	+		BWI76_RS13700	0.51	-0.2
2,859,041	+		BWI76_RS13700	0.55	+0.8
2,859,049	-		BWI76_RS13700	0.56	+1.0
2,859,055	-		BWI76_RS13700	0.57	-0.8
2,859,056	+		BWI76_RS13700	0.57	-0.2
2,859,106	-		BWI76_RS13700	0.62	-1.7
2,859,106	-		BWI76_RS13700	0.62	+0.4
2,859,106	-		BWI76_RS13700	0.62	-0.2
2,859,232	+		BWI76_RS13700	0.76	-1.2
2,859,290	+		BWI76_RS13700	0.82	-1.5
2,859,311	+		BWI76_RS13700	0.85	-1.5
2,859,334	-		BWI76_RS13700	0.87	-1.5
2,859,354	+		BWI76_RS13700	0.89	-0.5
2,859,382	+				-2.3
2,859,383	+				-1.0
2,859,383	+				-2.6
2,859,391	-				+1.0
2,859,391	-				+1.0
2,859,393	+				+2.9
2,859,393	+				+0.3
2,859,393	+				-0.1
2,859,393	+				+0.4
2,859,393	+				+1.4
2,859,393	+				-0.7
2,859,393	+				-0.9
2,859,402	+				-0.4
2,859,402	+				+3.4
2,859,402	+				+1.7
2,859,402	+				+0.4
2,859,413	+				-0.1
2,859,421	-				-1.8
2,859,421	-				-1.4
2,859,428	+				+1.1
2,859,428	+				-1.3
2,859,428	+				-1.7
2,859,428	+				-0.6
2,859,428	+				-1.0
2,859,428	+				-0.1
2,859,428	+				+0.3
2,859,428	+				-0.7
2,859,428	+				-0.6
2,859,428	+				-0.7
2,859,428	+				-0.8
2,859,428	+				-0.3
2,859,428	+				-2.0
2,859,435	+				-0.5
2,859,436	-				-0.7
2,859,440	-				-1.3
2,859,447	+				-1.1
2,859,447	+				-0.3
2,859,447	+				-1.0