Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12965
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X |
---|---|---|---|---|---|
remove | |||||
2,701,853 | - | -0.5 | |||
2,701,935 | + | -0.3 | |||
2,702,072 | + | -1.3 | |||
2,702,080 | - | -1.8 | |||
2,702,497 | + | -1.6 | |||
2,702,575 | + | -3.2 | |||
2,702,583 | + | +2.5 | |||
2,702,583 | + | -0.9 | |||
2,702,590 | + | +0.5 | |||
2,702,591 | - | -1.5 | |||
2,702,779 | + | +0.3 | |||
2,702,779 | + | -2.1 | |||
2,703,053 | - | BWI76_RS12965 | 0.31 | -0.6 | |
2,703,123 | + | BWI76_RS12965 | 0.39 | -1.2 | |
2,703,151 | + | BWI76_RS12965 | 0.43 | -2.8 | |
2,703,169 | + | BWI76_RS12965 | 0.45 | -0.1 | |
2,703,194 | - | BWI76_RS12965 | 0.47 | -2.4 | |
2,703,338 | - | BWI76_RS12965 | 0.64 | +2.3 | |
2,703,491 | - | BWI76_RS12965 | 0.82 | +1.2 | |
2,703,757 | + | -0.3 | |||
2,703,937 | + | BWI76_RS12970 | 0.12 | -0.2 | |
2,704,208 | - | BWI76_RS12970 | 0.31 | -0.2 | |
2,704,340 | + | BWI76_RS12970 | 0.40 | +0.2 | |
2,704,441 | + | BWI76_RS12970 | 0.47 | +1.0 | |
2,704,556 | + | BWI76_RS12970 | 0.55 | -0.8 | |
2,704,587 | - | BWI76_RS12970 | 0.57 | +0.2 | |
2,704,587 | - | BWI76_RS12970 | 0.57 | -0.1 | |
2,704,593 | - | BWI76_RS12970 | 0.58 | +0.5 | |
2,704,597 | - | BWI76_RS12970 | 0.58 | +0.0 |
Or see this region's nucleotide sequence