Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11695 and BWI76_RS11700 are separated by 208 nucleotides BWI76_RS11700 and BWI76_RS11705 are separated by 4 nucleotides
BWI76_RS11695: BWI76_RS11695 - ATP-independent periplasmic protein-refolding chaperone, at 2,461,237 to 2,461,719
_RS11695
BWI76_RS11700: BWI76_RS11700 - hypothetical protein, at 2,461,928 to 2,462,470
_RS11700
BWI76_RS11705: BWI76_RS11705 - hypothetical protein, at 2,462,475 to 2,464,517
_RS11705
Position (kb)
2461
2462
2463 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2461.161 kb on + strand at 2461.161 kb on - strand at 2461.182 kb on + strand at 2461.195 kb on + strand at 2461.195 kb on - strand at 2461.252 kb on + strand at 2461.257 kb on + strand at 2461.265 kb on + strand at 2461.270 kb on + strand at 2461.273 kb on - strand at 2461.281 kb on + strand at 2461.286 kb on + strand, within BWI76_RS11695 at 2461.294 kb on - strand, within BWI76_RS11695 at 2461.294 kb on - strand, within BWI76_RS11695 at 2461.316 kb on + strand, within BWI76_RS11695 at 2461.324 kb on - strand, within BWI76_RS11695 at 2461.386 kb on + strand, within BWI76_RS11695 at 2461.394 kb on - strand, within BWI76_RS11695 at 2461.479 kb on - strand, within BWI76_RS11695 at 2461.480 kb on - strand, within BWI76_RS11695 at 2461.535 kb on - strand, within BWI76_RS11695 at 2461.554 kb on + strand, within BWI76_RS11695 at 2461.579 kb on + strand, within BWI76_RS11695 at 2461.714 kb on + strand at 2461.714 kb on + strand at 2461.731 kb on + strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.857 kb on - strand at 2461.869 kb on - strand at 2462.037 kb on + strand, within BWI76_RS11700 at 2462.426 kb on + strand at 2462.634 kb on + strand at 2462.979 kb on + strand, within BWI76_RS11705
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X remove 2,461,161 + -1.0 2,461,161 - -2.1 2,461,182 + +0.7 2,461,195 + +0.2 2,461,195 - +1.2 2,461,252 + +0.2 2,461,257 + +0.2 2,461,265 + +0.7 2,461,270 + +0.3 2,461,273 - -0.0 2,461,281 + +0.2 2,461,286 + BWI76_RS11695 0.10 +1.4 2,461,294 - BWI76_RS11695 0.12 +1.2 2,461,294 - BWI76_RS11695 0.12 +0.7 2,461,316 + BWI76_RS11695 0.16 -1.1 2,461,324 - BWI76_RS11695 0.18 +0.8 2,461,386 + BWI76_RS11695 0.31 +1.9 2,461,394 - BWI76_RS11695 0.33 -1.2 2,461,479 - BWI76_RS11695 0.50 -0.4 2,461,480 - BWI76_RS11695 0.50 -0.3 2,461,535 - BWI76_RS11695 0.62 -0.3 2,461,554 + BWI76_RS11695 0.66 -0.4 2,461,579 + BWI76_RS11695 0.71 -0.4 2,461,714 + +0.4 2,461,714 + +0.1 2,461,731 + +0.9 2,461,777 - -1.1 2,461,777 - -0.6 2,461,777 - -0.7 2,461,777 - -0.1 2,461,857 - -0.3 2,461,869 - +0.3 2,462,037 + BWI76_RS11700 0.20 -1.7 2,462,426 + -1.4 2,462,634 + -0.2 2,462,979 + BWI76_RS11705 0.25 -0.6
Or see this region's nucleotide sequence