Experiment: Sucrose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS18365 and PFLU_RS18370 overlap by 4 nucleotides PFLU_RS18370 and PFLU_RS18375 overlap by 1 nucleotides PFLU_RS18375 and PFLU_RS18380 overlap by 4 nucleotides PFLU_RS18380 and PFLU_RS18385 are separated by 24 nucleotides
PFLU_RS18365: PFLU_RS18365 - UDP-N-acetylmuramate dehydrogenase, at 4,164,606 to 4,165,625
_RS18365
PFLU_RS18370: PFLU_RS18370 - low molecular weight phosphotyrosine protein phosphatase, at 4,165,622 to 4,166,086
_RS18370
PFLU_RS18375: PFLU_RS18375 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 4,166,086 to 4,166,850
_RS18375
PFLU_RS18380: PFLU_RS18380 - Trm112 family protein, at 4,166,847 to 4,167,032
_RS18380
PFLU_RS18385: PFLU_RS18385 - tetraacyldisaccharide 4'-kinase, at 4,167,057 to 4,168,067
_RS18385
Position (kb) 4165
4166
4167 Strain fitness (log2 ratio) -2
-1
0
1 at 4165.652 kb on + strand at 4165.653 kb on - strand at 4165.653 kb on - strand at 4165.710 kb on + strand, within PFLU_RS18370 at 4165.710 kb on + strand, within PFLU_RS18370 at 4165.710 kb on + strand, within PFLU_RS18370 at 4165.710 kb on + strand, within PFLU_RS18370 at 4165.711 kb on - strand, within PFLU_RS18370 at 4165.711 kb on - strand, within PFLU_RS18370 at 4165.713 kb on + strand, within PFLU_RS18370 at 4165.714 kb on - strand, within PFLU_RS18370 at 4165.803 kb on - strand, within PFLU_RS18370 at 4165.803 kb on - strand, within PFLU_RS18370 at 4165.803 kb on - strand, within PFLU_RS18370 at 4165.845 kb on + strand, within PFLU_RS18370 at 4165.845 kb on + strand, within PFLU_RS18370 at 4165.899 kb on + strand, within PFLU_RS18370 at 4165.979 kb on + strand, within PFLU_RS18370 at 4165.980 kb on - strand, within PFLU_RS18370 at 4165.980 kb on - strand, within PFLU_RS18370 at 4165.980 kb on - strand, within PFLU_RS18370 at 4166.018 kb on - strand, within PFLU_RS18370 at 4166.018 kb on - strand, within PFLU_RS18370 at 4166.027 kb on + strand, within PFLU_RS18370 at 4166.027 kb on + strand, within PFLU_RS18370 at 4166.027 kb on + strand, within PFLU_RS18370 at 4166.028 kb on - strand, within PFLU_RS18370 at 4166.028 kb on - strand, within PFLU_RS18370 at 4166.056 kb on + strand at 4166.056 kb on + strand at 4166.057 kb on - strand at 4166.057 kb on - strand at 4167.058 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose 5 mM (C) remove 4,165,652 + -1.4 4,165,653 - -0.7 4,165,653 - +0.6 4,165,710 + PFLU_RS18370 0.19 +0.2 4,165,710 + PFLU_RS18370 0.19 +0.2 4,165,710 + PFLU_RS18370 0.19 +0.0 4,165,710 + PFLU_RS18370 0.19 -1.6 4,165,711 - PFLU_RS18370 0.19 -0.7 4,165,711 - PFLU_RS18370 0.19 +0.6 4,165,713 + PFLU_RS18370 0.20 +0.5 4,165,714 - PFLU_RS18370 0.20 -0.5 4,165,803 - PFLU_RS18370 0.39 -1.0 4,165,803 - PFLU_RS18370 0.39 +1.3 4,165,803 - PFLU_RS18370 0.39 -0.0 4,165,845 + PFLU_RS18370 0.48 +1.7 4,165,845 + PFLU_RS18370 0.48 +0.6 4,165,899 + PFLU_RS18370 0.60 -0.4 4,165,979 + PFLU_RS18370 0.77 -1.3 4,165,980 - PFLU_RS18370 0.77 -0.5 4,165,980 - PFLU_RS18370 0.77 +0.3 4,165,980 - PFLU_RS18370 0.77 -1.4 4,166,018 - PFLU_RS18370 0.85 -0.1 4,166,018 - PFLU_RS18370 0.85 +1.2 4,166,027 + PFLU_RS18370 0.87 -0.3 4,166,027 + PFLU_RS18370 0.87 +0.2 4,166,027 + PFLU_RS18370 0.87 -0.5 4,166,028 - PFLU_RS18370 0.87 +0.3 4,166,028 - PFLU_RS18370 0.87 -2.0 4,166,056 + -1.2 4,166,056 + +0.8 4,166,057 - +0.2 4,166,057 - +1.5 4,167,058 + -2.7
Or see this region's nucleotide sequence