Experiment: Sucrose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS09250 and PFLU_RS09255 are separated by 139 nucleotides PFLU_RS09255 and PFLU_RS09260 are separated by 159 nucleotides PFLU_RS09260 and PFLU_RS09265 are separated by 19 nucleotides PFLU_RS09265 and PFLU_RS09270 are separated by 176 nucleotides PFLU_RS09270 and PFLU_RS09275 are separated by 19 nucleotides PFLU_RS09275 and PFLU_RS09280 are separated by 233 nucleotides
PFLU_RS09250: PFLU_RS09250 - bile acid:sodium symporter family protein, at 2,047,798 to 2,048,763
_RS09250
PFLU_RS09255: PFLU_RS09255 - recombination-associated protein RdgC, at 2,048,903 to 2,049,823
_RS09255
PFLU_RS09260: PFLU_RS09260 - tRNA-Val, at 2,049,983 to 2,050,058
_RS09260
PFLU_RS09265: PFLU_RS09265 - tRNA-Asp, at 2,050,078 to 2,050,154
_RS09265
PFLU_RS09270: PFLU_RS09270 - tRNA-Val, at 2,050,331 to 2,050,406
_RS09270
PFLU_RS09275: PFLU_RS09275 - tRNA-Asp, at 2,050,426 to 2,050,502
_RS09275
PFLU_RS09280: PFLU_RS09280 - DUF4102 domain-containing protein, at 2,050,736 to 2,052,049
_RS09280
Position (kb)
2048
2049
2050 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2048.043 kb on - strand, within PFLU_RS09250 at 2048.043 kb on - strand, within PFLU_RS09250 at 2048.188 kb on + strand, within PFLU_RS09250 at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.836 kb on + strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.837 kb on - strand at 2048.845 kb on + strand at 2048.845 kb on + strand at 2048.845 kb on + strand at 2048.846 kb on - strand at 2048.846 kb on - strand at 2048.904 kb on + strand at 2048.904 kb on + strand at 2048.904 kb on + strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2048.905 kb on - strand at 2049.463 kb on + strand, within PFLU_RS09255 at 2049.464 kb on - strand, within PFLU_RS09255 at 2049.464 kb on - strand, within PFLU_RS09255 at 2049.523 kb on + strand, within PFLU_RS09255 at 2049.523 kb on + strand, within PFLU_RS09255 at 2049.523 kb on + strand, within PFLU_RS09255 at 2049.523 kb on + strand, within PFLU_RS09255 at 2049.523 kb on + strand, within PFLU_RS09255 at 2049.523 kb on + strand, within PFLU_RS09255 at 2049.524 kb on - strand, within PFLU_RS09255 at 2049.524 kb on - strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.525 kb on + strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.526 kb on - strand, within PFLU_RS09255 at 2049.676 kb on + strand, within PFLU_RS09255 at 2049.677 kb on - strand, within PFLU_RS09255 at 2049.699 kb on + strand, within PFLU_RS09255 at 2049.699 kb on + strand, within PFLU_RS09255 at 2049.699 kb on + strand, within PFLU_RS09255 at 2049.699 kb on + strand, within PFLU_RS09255 at 2049.699 kb on + strand, within PFLU_RS09255 at 2049.700 kb on - strand, within PFLU_RS09255 at 2049.700 kb on - strand, within PFLU_RS09255 at 2049.700 kb on - strand, within PFLU_RS09255 at 2049.700 kb on - strand, within PFLU_RS09255 at 2049.700 kb on - strand, within PFLU_RS09255 at 2049.700 kb on - strand, within PFLU_RS09255 at 2049.798 kb on + strand at 2049.798 kb on + strand at 2049.798 kb on + strand at 2049.798 kb on + strand at 2049.799 kb on - strand at 2049.799 kb on - strand at 2049.799 kb on - strand at 2049.799 kb on - strand at 2049.799 kb on - strand at 2049.799 kb on - strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.802 kb on + strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.803 kb on - strand at 2049.841 kb on + strand at 2049.841 kb on + strand at 2049.842 kb on - strand at 2049.842 kb on - strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.843 kb on + strand at 2049.844 kb on - strand at 2049.844 kb on - strand at 2049.844 kb on - strand at 2049.844 kb on - strand at 2049.844 kb on - strand at 2049.844 kb on - strand at 2049.844 kb on - strand at 2049.858 kb on + strand at 2049.858 kb on + strand at 2049.859 kb on - strand at 2049.859 kb on - strand at 2049.859 kb on - strand at 2049.859 kb on - strand at 2049.859 kb on - strand at 2049.892 kb on + strand at 2049.893 kb on - strand at 2049.893 kb on - strand at 2049.923 kb on + strand at 2049.957 kb on + strand at 2050.163 kb on + strand at 2050.278 kb on + strand at 2050.306 kb on + strand at 2050.503 kb on + strand at 2050.503 kb on + strand at 2050.503 kb on + strand at 2050.516 kb on + strand at 2050.549 kb on + strand at 2050.615 kb on + strand at 2050.616 kb on - strand at 2050.616 kb on - strand at 2050.616 kb on - strand at 2050.616 kb on - strand at 2050.619 kb on + strand at 2050.620 kb on - strand at 2050.627 kb on + strand at 2050.627 kb on + strand at 2050.627 kb on + strand at 2050.627 kb on + strand at 2050.627 kb on + strand at 2050.628 kb on - strand at 2050.628 kb on - strand at 2050.628 kb on - strand at 2050.628 kb on - strand at 2050.632 kb on - strand at 2050.652 kb on + strand at 2050.652 kb on + strand at 2050.653 kb on - strand at 2050.678 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.703 kb on + strand at 2050.704 kb on - strand at 2050.704 kb on - strand at 2050.704 kb on - strand at 2050.704 kb on - strand at 2050.704 kb on - strand at 2050.704 kb on - strand at 2050.704 kb on - strand at 2050.704 kb on - strand at 2050.750 kb on + strand at 2050.750 kb on + strand at 2050.750 kb on + strand at 2050.750 kb on + strand at 2050.751 kb on - strand at 2050.751 kb on - strand at 2050.751 kb on - strand at 2050.787 kb on + strand at 2050.787 kb on + strand at 2050.787 kb on + strand at 2050.787 kb on + strand at 2050.787 kb on + strand at 2050.787 kb on + strand at 2050.787 kb on + strand at 2050.788 kb on - strand at 2050.788 kb on - strand at 2050.788 kb on - strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.789 kb on + strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.790 kb on - strand at 2050.794 kb on + strand at 2050.794 kb on + strand at 2050.795 kb on - strand at 2050.795 kb on - strand at 2050.795 kb on - strand at 2050.795 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose 5 mM (C) remove 2,048,043 - PFLU_RS09250 0.25 -2.0 2,048,043 - PFLU_RS09250 0.25 +0.0 2,048,188 + PFLU_RS09250 0.40 +2.6 2,048,836 + -0.2 2,048,836 + -0.3 2,048,836 + -0.9 2,048,836 + -0.1 2,048,836 + +1.0 2,048,836 + -0.1 2,048,836 + +0.1 2,048,836 + +0.8 2,048,836 + -1.1 2,048,836 + -2.1 2,048,836 + -0.1 2,048,836 + -1.2 2,048,836 + -0.8 2,048,836 + +0.2 2,048,836 + -0.6 2,048,836 + +0.5 2,048,836 + -0.4 2,048,836 + +1.0 2,048,836 + +0.6 2,048,836 + +0.2 2,048,837 - +0.4 2,048,837 - +1.0 2,048,837 - +0.9 2,048,837 - +1.4 2,048,837 - -2.3 2,048,837 - -0.6 2,048,837 - -0.4 2,048,837 - +0.3 2,048,837 - +0.1 2,048,837 - -2.1 2,048,837 - +0.4 2,048,837 - +1.2 2,048,837 - +0.3 2,048,837 - -1.6 2,048,837 - -0.6 2,048,837 - +0.7 2,048,837 - -0.5 2,048,837 - +0.1 2,048,837 - +0.5 2,048,837 - +0.4 2,048,837 - +1.4 2,048,837 - +0.4 2,048,845 + -2.6 2,048,845 + -0.2 2,048,845 + -1.0 2,048,846 - +1.7 2,048,846 - -1.5 2,048,904 + +0.2 2,048,904 + +1.1 2,048,904 + -0.2 2,048,905 - -0.6 2,048,905 - +1.7 2,048,905 - -0.4 2,048,905 - +1.0 2,048,905 - -1.8 2,048,905 - -2.3 2,048,905 - -1.2 2,048,905 - +0.4 2,048,905 - -2.0 2,048,905 - +0.0 2,049,463 + PFLU_RS09255 0.61 -0.7 2,049,464 - PFLU_RS09255 0.61 +0.1 2,049,464 - PFLU_RS09255 0.61 -2.2 2,049,523 + PFLU_RS09255 0.67 -0.2 2,049,523 + PFLU_RS09255 0.67 -0.0 2,049,523 + PFLU_RS09255 0.67 +1.0 2,049,523 + PFLU_RS09255 0.67 +1.9 2,049,523 + PFLU_RS09255 0.67 -0.3 2,049,523 + PFLU_RS09255 0.67 -1.5 2,049,524 - PFLU_RS09255 0.67 -0.2 2,049,524 - PFLU_RS09255 0.67 -2.7 2,049,525 + PFLU_RS09255 0.68 +1.8 2,049,525 + PFLU_RS09255 0.68 +0.4 2,049,525 + PFLU_RS09255 0.68 +1.4 2,049,525 + PFLU_RS09255 0.68 +0.6 2,049,525 + PFLU_RS09255 0.68 +0.1 2,049,525 + PFLU_RS09255 0.68 -0.5 2,049,525 + PFLU_RS09255 0.68 +0.0 2,049,525 + PFLU_RS09255 0.68 -0.8 2,049,525 + PFLU_RS09255 0.68 +1.4 2,049,525 + PFLU_RS09255 0.68 -0.3 2,049,525 + PFLU_RS09255 0.68 -0.1 2,049,525 + PFLU_RS09255 0.68 -2.1 2,049,526 - PFLU_RS09255 0.68 -0.0 2,049,526 - PFLU_RS09255 0.68 +0.7 2,049,526 - PFLU_RS09255 0.68 -0.0 2,049,526 - PFLU_RS09255 0.68 -1.8 2,049,526 - PFLU_RS09255 0.68 +2.4 2,049,526 - PFLU_RS09255 0.68 -0.3 2,049,526 - PFLU_RS09255 0.68 +1.2 2,049,526 - PFLU_RS09255 0.68 +1.1 2,049,526 - PFLU_RS09255 0.68 -1.3 2,049,526 - PFLU_RS09255 0.68 +0.0 2,049,676 + PFLU_RS09255 0.84 -0.2 2,049,677 - PFLU_RS09255 0.84 -1.6 2,049,699 + PFLU_RS09255 0.86 +2.2 2,049,699 + PFLU_RS09255 0.86 -1.6 2,049,699 + PFLU_RS09255 0.86 -0.4 2,049,699 + PFLU_RS09255 0.86 +0.2 2,049,699 + PFLU_RS09255 0.86 +0.0 2,049,700 - PFLU_RS09255 0.87 -1.0 2,049,700 - PFLU_RS09255 0.87 -0.6 2,049,700 - PFLU_RS09255 0.87 -2.5 2,049,700 - PFLU_RS09255 0.87 +0.4 2,049,700 - PFLU_RS09255 0.87 +0.4 2,049,700 - PFLU_RS09255 0.87 +0.6 2,049,798 + -0.2 2,049,798 + -0.2 2,049,798 + -0.6 2,049,798 + -0.6 2,049,799 - -1.5 2,049,799 - -1.6 2,049,799 - +1.5 2,049,799 - -1.2 2,049,799 - -1.2 2,049,799 - -0.5 2,049,802 + +0.9 2,049,802 + +0.8 2,049,802 + +0.6 2,049,802 + +0.0 2,049,802 + -0.9 2,049,802 + +0.2 2,049,802 + -0.8 2,049,802 + +1.9 2,049,802 + +0.8 2,049,802 + -0.2 2,049,802 + -1.5 2,049,802 + +1.9 2,049,802 + +1.4 2,049,802 + +0.4 2,049,802 + +1.9 2,049,802 + +0.8 2,049,802 + -0.2 2,049,802 + +2.4 2,049,802 + -1.0 2,049,802 + +1.4 2,049,803 - +0.4 2,049,803 - -0.8 2,049,803 - +0.8 2,049,803 - -1.6 2,049,803 - -0.6 2,049,803 - +0.4 2,049,803 - -0.8 2,049,803 - +0.7 2,049,803 - -1.2 2,049,803 - -0.2 2,049,803 - +0.1 2,049,803 - -1.8 2,049,803 - +0.4 2,049,803 - +0.1 2,049,803 - -1.2 2,049,803 - +2.8 2,049,803 - -1.5 2,049,803 - -0.2 2,049,803 - +0.4 2,049,841 + -0.0 2,049,841 + +1.2 2,049,842 - +0.5 2,049,842 - +0.0 2,049,843 + +0.7 2,049,843 + -0.6 2,049,843 + +0.7 2,049,843 + -1.6 2,049,843 + -2.1 2,049,843 + -2.6 2,049,843 + +0.7 2,049,843 + +0.4 2,049,843 + +0.0 2,049,843 + +0.4 2,049,843 + -1.3 2,049,844 - -0.4 2,049,844 - -2.5 2,049,844 - +0.8 2,049,844 - -0.1 2,049,844 - +0.4 2,049,844 - +0.8 2,049,844 - +0.4 2,049,858 + -2.3 2,049,858 + +1.1 2,049,859 - +0.0 2,049,859 - +0.4 2,049,859 - -1.8 2,049,859 - -1.6 2,049,859 - +1.1 2,049,892 + +0.4 2,049,893 - +2.0 2,049,893 - +1.4 2,049,923 + +1.4 2,049,957 + -0.2 2,050,163 + -2.5 2,050,278 + +0.2 2,050,306 + +0.4 2,050,503 + +0.9 2,050,503 + +0.5 2,050,503 + -0.9 2,050,516 + +0.0 2,050,549 + +0.3 2,050,615 + -0.8 2,050,616 - +1.1 2,050,616 - -0.2 2,050,616 - +0.4 2,050,616 - -3.0 2,050,619 + -2.5 2,050,620 - +1.9 2,050,627 + +1.0 2,050,627 + +0.4 2,050,627 + -0.5 2,050,627 + -1.1 2,050,627 + -0.9 2,050,628 - -0.6 2,050,628 - -0.2 2,050,628 - +0.1 2,050,628 - +0.4 2,050,632 - +0.4 2,050,652 + +0.4 2,050,652 + +0.6 2,050,653 - +1.1 2,050,678 + +0.1 2,050,703 + -1.2 2,050,703 + +0.8 2,050,703 + +0.4 2,050,703 + +1.7 2,050,703 + -0.1 2,050,703 + +0.4 2,050,703 + +0.2 2,050,703 + -2.8 2,050,703 + -0.6 2,050,703 + +0.2 2,050,703 + +0.0 2,050,703 + -1.1 2,050,703 + -1.6 2,050,703 + -1.0 2,050,703 + -0.1 2,050,703 + +1.2 2,050,703 + -0.1 2,050,704 - -0.5 2,050,704 - -0.6 2,050,704 - +0.7 2,050,704 - +0.5 2,050,704 - +3.4 2,050,704 - -0.3 2,050,704 - +0.4 2,050,704 - +0.1 2,050,750 + -0.3 2,050,750 + -0.6 2,050,750 + -0.2 2,050,750 + +0.0 2,050,751 - +0.1 2,050,751 - +0.7 2,050,751 - -0.4 2,050,787 + -1.5 2,050,787 + +1.1 2,050,787 + -0.5 2,050,787 + -3.2 2,050,787 + +1.4 2,050,787 + -0.9 2,050,787 + +0.8 2,050,788 - -0.3 2,050,788 - -0.6 2,050,788 - -0.9 2,050,789 + -1.2 2,050,789 + -0.6 2,050,789 + -0.0 2,050,789 + -0.1 2,050,789 + -0.9 2,050,789 + +1.2 2,050,789 + +0.8 2,050,789 + +1.4 2,050,789 + +0.1 2,050,789 + +0.8 2,050,789 + +1.0 2,050,789 + +0.1 2,050,789 + +0.9 2,050,789 + +0.4 2,050,789 + +0.0 2,050,789 + -0.6 2,050,789 + -0.7 2,050,789 + -0.2 2,050,789 + +0.7 2,050,789 + +0.4 2,050,789 + -1.2 2,050,789 + -0.1 2,050,789 + -1.6 2,050,790 - +0.1 2,050,790 - +0.7 2,050,790 - +0.4 2,050,790 - -0.2 2,050,790 - +1.9 2,050,790 - +1.0 2,050,790 - -2.1 2,050,790 - -2.0 2,050,790 - -1.2 2,050,790 - -2.2 2,050,790 - +0.8 2,050,790 - +0.6 2,050,790 - -0.6 2,050,790 - +0.9 2,050,790 - -0.5 2,050,790 - +0.0 2,050,790 - -1.6 2,050,790 - +0.4 2,050,790 - -0.2 2,050,790 - +1.9 2,050,790 - +0.0 2,050,790 - +1.4 2,050,790 - +0.4 2,050,790 - +1.1 2,050,790 - -0.6 2,050,790 - -1.2 2,050,794 + +1.6 2,050,794 + -0.4 2,050,795 - +3.4 2,050,795 - -0.0 2,050,795 - -0.5 2,050,795 - +1.4
Or see this region's nucleotide sequence