Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2869

Experiment: NoPhage

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NoPhage
3,588,806	+				-1.2
3,588,806	+				-1.6
3,588,816	+				-0.2
3,588,816	+				+0.6
3,588,819	+				+1.0
3,588,834	+				-0.0
3,588,838	+				-1.0
3,588,848	+				-1.0
3,588,872	+				-1.7
3,588,895	+				-0.6
3,588,895	+				+2.0
3,588,898	-				+1.1
3,588,898	-				+2.7
3,588,939	-		BT2868	0.13	+1.0
3,588,939	-		BT2868	0.13	+0.7
3,588,939	-		BT2868	0.13	+0.2
3,588,977	+		BT2868	0.17	-0.4
3,588,978	-		BT2868	0.17	-1.1
3,588,987	+		BT2868	0.18	+0.2
3,588,996	+		BT2868	0.19	+1.0
3,589,015	+		BT2868	0.21	-1.2
3,589,045	+		BT2868	0.24	-2.3
3,589,046	-		BT2868	0.24	-0.2
3,589,075	+		BT2868	0.27	-1.8
3,589,094	+		BT2868	0.29	+1.4
3,589,094	+		BT2868	0.29	+0.4
3,589,097	-		BT2868	0.29	-0.0
3,589,097	-		BT2868	0.29	-0.5
3,589,109	-		BT2868	0.30	-1.5
3,589,115	-		BT2868	0.31	-1.5
3,589,115	-		BT2868	0.31	-1.0
3,589,115	-		BT2868	0.31	-1.0
3,589,118	-		BT2868	0.31	-1.2
3,589,120	-		BT2868	0.32	+1.8
3,589,120	-		BT2868	0.32	-0.9
3,589,158	+		BT2868	0.35	-1.2
3,589,167	+		BT2868	0.36	-1.0
3,589,168	-		BT2868	0.36	-0.6
3,589,168	-		BT2868	0.36	-0.0
3,589,168	-		BT2868	0.36	+0.2
3,589,170	-		BT2868	0.37	+1.6
3,589,239	+		BT2868	0.43	-2.5
3,589,275	+		BT2868	0.47	+0.1
3,589,289	+		BT2868	0.48	+0.6
3,589,319	-		BT2868	0.51	-0.7
3,589,371	+		BT2868	0.57	-2.3
3,589,371	+		BT2868	0.57	-0.4
3,589,374	+		BT2868	0.57	-1.0
3,589,374	+		BT2868	0.57	-0.5
3,589,376	+		BT2868	0.57	+0.3
3,589,377	-		BT2868	0.57	+0.5
3,589,392	+		BT2868	0.59	-0.3
3,589,395	-		BT2868	0.59	-1.5
3,589,421	+		BT2868	0.62	-0.3
3,589,422	-		BT2868	0.62	+0.7
3,589,496	-		BT2868	0.69	-0.1
3,589,496	-		BT2868	0.69	-0.8
3,589,496	-		BT2868	0.69	-0.6
3,589,496	-		BT2868	0.69	-0.2
3,589,513	+		BT2868	0.71	-0.3
3,589,517	+		BT2868	0.71	-2.1
3,589,520	+		BT2868	0.72	-0.0
3,589,557	+		BT2868	0.75	+1.6
3,589,571	-		BT2868	0.77	+0.5
3,589,646	-		BT2868	0.84	-1.3
3,589,646	-		BT2868	0.84	-0.4
3,589,646	-		BT2868	0.84	+0.4
3,589,646	-		BT2868	0.84	-1.0
3,589,648	+		BT2868	0.84	-1.0
3,589,651	-		BT2868	0.85	-0.9
3,589,652	+		BT2868	0.85	-2.0
3,589,669	-		BT2868	0.86	-0.3
3,589,671	+		BT2868	0.87	+1.3
3,589,672	-		BT2868	0.87	+1.3
3,589,716	+				-0.0
3,589,760	+				-1.9
3,589,760	+				-0.0
3,589,761	-				-1.5
3,589,761	-				+0.8
3,589,783	-				-1.3
3,589,786	+				-0.3
3,589,787	-				-0.0
3,589,909	-				-1.4
3,589,933	+		BT2869	0.12	+2.1
3,589,934	-		BT2869	0.12	-0.1
3,589,934	-		BT2869	0.12	+1.3
3,590,001	-		BT2869	0.18	-4.3
3,590,008	+		BT2869	0.19	-0.0
3,590,054	+		BT2869	0.23	+0.3
3,590,085	+		BT2869	0.26	+0.1
3,590,132	+		BT2869	0.30	+0.5
3,590,132	+		BT2869	0.30	+0.4
3,590,132	+		BT2869	0.30	-1.0
3,590,132	+		BT2869	0.30	+2.4
3,590,136	+		BT2869	0.30	-0.1
3,590,136	+		BT2869	0.30	+1.4
3,590,147	+		BT2869	0.31	-0.9
3,590,149	+		BT2869	0.32	-2.2
3,590,150	-		BT2869	0.32	+1.0
3,590,191	-		BT2869	0.35	-0.5
3,590,272	+		BT2869	0.43	+0.4
3,590,294	+		BT2869	0.45	-0.2
3,590,297	+		BT2869	0.45	-1.0
3,590,297	+		BT2869	0.45	+0.2
3,590,297	+		BT2869	0.45	-1.2
3,590,306	+		BT2869	0.46	+1.0
3,590,306	+		BT2869	0.46	+0.3
3,590,321	+		BT2869	0.47	-1.8
3,590,321	+		BT2869	0.47	+2.8
3,590,365	-		BT2869	0.51	-2.2
3,590,371	+		BT2869	0.52	-0.4
3,590,398	+		BT2869	0.54	-0.6
3,590,398	+		BT2869	0.54	+0.8
3,590,423	+		BT2869	0.56	-0.5
3,590,423	+		BT2869	0.56	-1.0
3,590,423	+		BT2869	0.56	-1.7
3,590,424	-		BT2869	0.57	+1.5
3,590,424	-		BT2869	0.57	+1.2
3,590,456	-		BT2869	0.59	-1.2
3,590,483	+		BT2869	0.62	+1.4
3,590,484	-		BT2869	0.62	+1.0
3,590,511	+		BT2869	0.64	-1.3
3,590,586	+		BT2869	0.71	-1.0
3,590,586	+		BT2869	0.71	-0.8
3,590,587	-		BT2869	0.71	+0.8
3,590,598	+		BT2869	0.72	-0.5
3,590,602	+		BT2869	0.73	-0.9
3,590,622	+		BT2869	0.74	-0.8
3,590,623	-		BT2869	0.75	+1.0
3,590,634	+		BT2869	0.76	+1.5
3,590,743	-		BT2869	0.85	-0.3
3,590,764	+		BT2869	0.87	-1.0
3,590,767	-		BT2869	0.88	+0.4
3,590,795	+				+0.1
3,590,838	+				-0.6
3,590,991	-		BT2870	0.10	-1.8
3,591,028	+		BT2870	0.15	-1.8
3,591,076	+		BT2870	0.20	-0.0
3,591,082	-		BT2870	0.21	-0.6
3,591,128	+		BT2870	0.26	+1.0
3,591,155	-		BT2870	0.29	-1.3
3,591,167	+		BT2870	0.31	-2.0
3,591,167	+		BT2870	0.31	-1.0
3,591,211	+		BT2870	0.36	+1.7
3,591,214	+		BT2870	0.36	-0.0
3,591,218	+		BT2870	0.37	-1.3
3,591,230	-		BT2870	0.38	+0.4
3,591,272	+		BT2870	0.43	-0.0
3,591,317	+				+3.3
3,591,371	-		BT2870	0.54	-2.1
3,591,371	-		BT2870	0.54	+2.7
3,591,485	-		BT2870	0.67	+0.9
3,591,510	+		BT2870	0.70	-1.6
3,591,515	-		BT2870	0.71	+0.7
3,591,515	-		BT2870	0.71	+1.0
3,591,566	+		BT2870	0.77	-2.8
3,591,566	+		BT2870	0.77	+0.3
3,591,567	-		BT2870	0.77	-1.3
3,591,572	+		BT2870	0.78	-1.5
3,591,572	+		BT2870	0.78	-1.6
3,591,572	+		BT2870	0.78	+0.4
3,591,573	-		BT2870	0.78	-1.2
3,591,573	-		BT2870	0.78	-0.6
3,591,573	-		BT2870	0.78	+1.0
3,591,575	-		BT2870	0.78	-0.2
3,591,595	+		BT2870	0.80	-1.0
3,591,596	-		BT2870	0.80	-2.1
3,591,675	+		BT2870	0.89	+0.2
3,591,675	+		BT2870	0.89	+0.6
3,591,675	+		BT2870	0.89	-1.0
3,591,675	+		BT2870	0.89	-2.2
3,591,676	-		BT2870	0.90	-0.2
3,591,676	-		BT2870	0.90	-2.9
3,591,737	-				-0.6
3,591,744	-				-0.3
3,591,744	-				+0.1
3,591,744	-				+0.2
3,591,754	-				-0.4
3,591,810	+				+0.8
3,591,811	-				-0.6
3,591,824	+				+1.0
3,591,828	+				+2.2
3,591,887	+		BT2871	0.14	-0.3
3,591,887	+		BT2871	0.14	+1.9
3,591,891	+		BT2871	0.14	-1.6