Experiment: NoPhage
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0634 and BT0635 are separated by 209 nucleotides BT0635 and BT0636 are separated by 70 nucleotides BT0636 and BT0637 are separated by 114 nucleotides
BT0634: BT0634 - Na+/H+ antiporter 1 (NCBI ptt file), at 781,573 to 782,892
BT0634
BT0635: BT0635 - putative transcriptional regulator (NCBI ptt file), at 783,102 to 783,479
BT0635
BT0636: BT0636 - putative transcriptional regulator (NCBI ptt file), at 783,550 to 785,196
BT0636
BT0637: BT0637 - conserved hypothetical protein (NCBI ptt file), at 785,311 to 786,540
BT0637
Position (kb) 783
784
785
786 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 782.654 kb on + strand, within BT0634 at 782.711 kb on + strand, within BT0634 at 782.712 kb on - strand, within BT0634 at 782.827 kb on - strand at 782.867 kb on + strand at 782.870 kb on + strand at 782.871 kb on - strand at 782.893 kb on + strand at 782.961 kb on + strand at 782.965 kb on - strand at 782.966 kb on + strand at 783.143 kb on + strand, within BT0635 at 783.222 kb on - strand, within BT0635 at 783.230 kb on + strand, within BT0635 at 783.363 kb on + strand, within BT0635 at 783.446 kb on - strand at 783.478 kb on - strand at 783.594 kb on - strand at 783.775 kb on - strand, within BT0636 at 783.823 kb on - strand, within BT0636 at 783.883 kb on - strand, within BT0636 at 783.884 kb on + strand, within BT0636 at 783.989 kb on + strand, within BT0636 at 784.037 kb on - strand, within BT0636 at 784.274 kb on + strand, within BT0636 at 784.296 kb on + strand, within BT0636 at 784.306 kb on + strand, within BT0636 at 784.350 kb on + strand, within BT0636 at 784.435 kb on + strand, within BT0636 at 784.556 kb on - strand, within BT0636 at 784.596 kb on + strand, within BT0636 at 784.611 kb on + strand, within BT0636 at 784.638 kb on + strand, within BT0636 at 784.690 kb on - strand, within BT0636 at 784.725 kb on + strand, within BT0636 at 784.746 kb on + strand, within BT0636 at 784.792 kb on - strand, within BT0636 at 784.795 kb on - strand, within BT0636 at 784.860 kb on + strand, within BT0636 at 784.861 kb on - strand, within BT0636 at 785.004 kb on - strand, within BT0636 at 785.116 kb on - strand at 785.125 kb on + strand at 785.126 kb on - strand at 785.175 kb on + strand at 785.190 kb on + strand at 785.195 kb on - strand at 785.199 kb on - strand at 785.223 kb on - strand at 785.253 kb on + strand at 785.378 kb on - strand at 785.588 kb on - strand, within BT0637 at 785.679 kb on - strand, within BT0637 at 785.679 kb on - strand, within BT0637 at 785.735 kb on - strand, within BT0637 at 785.752 kb on - strand, within BT0637 at 785.837 kb on + strand, within BT0637 at 785.851 kb on + strand, within BT0637 at 785.887 kb on + strand, within BT0637
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhage remove 782,654 + BT0634 0.82 -1.5 782,711 + BT0634 0.86 -1.8 782,712 - BT0634 0.86 +1.2 782,827 - -0.6 782,867 + -2.4 782,870 + -0.5 782,871 - -1.2 782,893 + -0.6 782,961 + -0.8 782,965 - +0.7 782,966 + +0.2 783,143 + BT0635 0.11 -2.2 783,222 - BT0635 0.32 -0.0 783,230 + BT0635 0.34 -1.8 783,363 + BT0635 0.69 -0.3 783,446 - -0.3 783,478 - -2.2 783,594 - -1.0 783,775 - BT0636 0.14 +0.6 783,823 - BT0636 0.17 +1.3 783,883 - BT0636 0.20 +1.0 783,884 + BT0636 0.20 +1.0 783,989 + BT0636 0.27 -0.4 784,037 - BT0636 0.30 +1.3 784,274 + BT0636 0.44 +1.3 784,296 + BT0636 0.45 +0.6 784,306 + BT0636 0.46 -0.8 784,350 + BT0636 0.49 -1.8 784,435 + BT0636 0.54 +0.1 784,556 - BT0636 0.61 +0.1 784,596 + BT0636 0.64 -1.7 784,611 + BT0636 0.64 -0.2 784,638 + BT0636 0.66 +1.7 784,690 - BT0636 0.69 +1.8 784,725 + BT0636 0.71 +0.8 784,746 + BT0636 0.73 +1.0 784,792 - BT0636 0.75 -1.1 784,795 - BT0636 0.76 -0.5 784,860 + BT0636 0.80 -0.0 784,861 - BT0636 0.80 -0.3 785,004 - BT0636 0.88 -0.6 785,116 - -1.3 785,125 + +0.9 785,126 - -1.0 785,175 + -1.9 785,190 + +0.7 785,195 - +1.7 785,199 - -0.3 785,223 - -3.0 785,253 + -1.8 785,378 - -0.4 785,588 - BT0637 0.23 -1.8 785,679 - BT0637 0.30 -2.7 785,679 - BT0637 0.30 -0.9 785,735 - BT0637 0.34 -1.7 785,752 - BT0637 0.36 -1.8 785,837 + BT0637 0.43 -2.3 785,851 + BT0637 0.44 -2.0 785,887 + BT0637 0.47 -1.8
Or see this region's nucleotide sequence