Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30525

Experiment: Ferulic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid 2 mM (C)
1,826,305	+		PFLU_RS30520	0.13	+2.4
1,826,308	+		PFLU_RS30520	0.13	+3.6
1,826,331	+		PFLU_RS30520	0.15	+3.0
1,826,401	+		PFLU_RS30520	0.22	+2.6
1,826,427	+		PFLU_RS30520	0.24	+3.2
1,826,450	+		PFLU_RS30520	0.26	+2.8
1,826,450	+		PFLU_RS30520	0.26	+2.8
1,826,451	-		PFLU_RS30520	0.26	+2.6
1,826,451	-		PFLU_RS30520	0.26	+4.4
1,826,544	-		PFLU_RS30520	0.35	+2.6
1,826,550	-		PFLU_RS30520	0.35	+1.2
1,826,607	+		PFLU_RS30520	0.41	+2.8
1,826,614	-		PFLU_RS30520	0.41	+2.9
1,826,629	+		PFLU_RS30520	0.43	-1.2
1,826,629	+		PFLU_RS30520	0.43	+0.8
1,826,630	-		PFLU_RS30520	0.43	+2.7
1,826,630	-		PFLU_RS30520	0.43	+2.9
1,826,635	-		PFLU_RS30520	0.43	+2.3
1,826,731	+		PFLU_RS30520	0.52	+2.4
1,826,844	-		PFLU_RS30520	0.62	+1.0
1,826,852	+		PFLU_RS30520	0.63	+2.9
1,826,904	+		PFLU_RS30520	0.68	+3.7
1,826,927	-		PFLU_RS30520	0.70	+0.6
1,826,953	+		PFLU_RS30520	0.72	+1.4
1,826,954	-		PFLU_RS30520	0.73	+3.6
1,826,954	-		PFLU_RS30520	0.73	+0.3
1,826,954	-		PFLU_RS30520	0.73	+2.8
1,826,957	+		PFLU_RS30520	0.73	+3.4
1,826,958	-		PFLU_RS30520	0.73	+3.0
1,826,958	-		PFLU_RS30520	0.73	+3.6
1,826,984	-		PFLU_RS30520	0.75	+4.0
1,827,088	+		PFLU_RS30520	0.85	+0.4
1,827,088	+		PFLU_RS30520	0.85	+1.0
1,827,088	+		PFLU_RS30520	0.85	+0.8
1,827,089	-		PFLU_RS30520	0.85	+3.8
1,827,089	-		PFLU_RS30520	0.85	+4.0
1,827,153	+				+1.5
1,827,153	+				+2.5
1,827,153	+				+1.3
1,827,153	+				+1.8
1,827,153	+				+2.4
1,827,154	-				+3.1
1,827,154	-				+2.5
1,827,175	+				+0.7
1,827,175	+				+2.6
1,827,175	+				-0.2
1,827,175	+				+2.4
1,827,222	+				+2.2
1,827,222	+				+2.4
1,827,222	+				+1.6
1,827,223	-				+2.7
1,827,223	-				+3.9
1,827,252	-				+2.3
1,827,287	+				+3.1
1,827,287	+				+3.2
1,827,287	+				+3.6
1,827,287	+				+2.1
1,827,287	+				+2.1
1,827,287	+				+3.3
1,827,287	+				+3.6
1,827,287	+				+3.4
1,827,288	-				+3.2
1,827,288	-				+2.6
1,827,288	-				+2.0
1,827,288	-				+3.0
1,827,288	-				+1.8
1,827,288	-				+1.6
1,827,288	-				+3.0
1,827,288	-				+4.2
1,827,288	-				+3.5
1,827,288	-				+3.2
1,827,354	+		PFLU_RS30525	0.14	+2.3
1,827,354	+		PFLU_RS30525	0.14	+2.9
1,827,355	-		PFLU_RS30525	0.14	+3.2
1,827,355	-		PFLU_RS30525	0.14	+2.8
1,827,355	-		PFLU_RS30525	0.14	+4.5
1,827,378	+		PFLU_RS30525	0.17	+2.7
1,827,378	+		PFLU_RS30525	0.17	+2.6
1,827,379	-		PFLU_RS30525	0.17	+3.4
1,827,379	-		PFLU_RS30525	0.17	+2.4
1,827,379	-		PFLU_RS30525	0.17	+2.8
1,827,417	+		PFLU_RS30525	0.22	-0.3
1,827,417	+		PFLU_RS30525	0.22	+3.0
1,827,426	+		PFLU_RS30525	0.23	+3.4
1,827,432	-		PFLU_RS30525	0.24	+1.4
1,827,432	-		PFLU_RS30525	0.24	+3.6
1,827,449	+		PFLU_RS30525	0.26	+3.3
1,827,449	+		PFLU_RS30525	0.26	+2.0
1,827,533	+		PFLU_RS30525	0.37	+2.0
1,827,534	-		PFLU_RS30525	0.37	+2.5
1,827,534	-		PFLU_RS30525	0.37	+2.6
1,827,534	-		PFLU_RS30525	0.37	+2.6
1,827,543	+		PFLU_RS30525	0.39	+3.9
1,827,552	-		PFLU_RS30525	0.40	+3.0
1,827,558	+		PFLU_RS30525	0.41	+1.4
1,827,595	-		PFLU_RS30525	0.45	+3.4
1,827,599	+		PFLU_RS30525	0.46	+4.3
1,827,599	+		PFLU_RS30525	0.46	+2.9
1,827,599	+		PFLU_RS30525	0.46	+2.6
1,827,599	+		PFLU_RS30525	0.46	+3.6
1,827,600	-		PFLU_RS30525	0.46	+3.0
1,827,622	-		PFLU_RS30525	0.49	+2.8
1,827,622	-		PFLU_RS30525	0.49	+1.7
1,827,622	-		PFLU_RS30525	0.49	+2.0
1,827,622	-		PFLU_RS30525	0.49	+3.6
1,827,644	+		PFLU_RS30525	0.52	+3.6
1,827,644	+		PFLU_RS30525	0.52	+3.1
1,827,644	+		PFLU_RS30525	0.52	+1.4
1,827,645	-		PFLU_RS30525	0.52	+3.7
1,827,645	-		PFLU_RS30525	0.52	+2.7
1,827,645	-		PFLU_RS30525	0.52	+3.5
1,827,645	-		PFLU_RS30525	0.52	-0.3
1,827,648	+		PFLU_RS30525	0.52	+3.2
1,827,648	+		PFLU_RS30525	0.52	+4.6
1,827,648	+		PFLU_RS30525	0.52	+3.2
1,827,648	+		PFLU_RS30525	0.52	+3.6
1,827,648	+		PFLU_RS30525	0.52	+2.6
1,827,649	-		PFLU_RS30525	0.53	+3.8
1,827,649	-		PFLU_RS30525	0.53	+2.1
1,827,649	-		PFLU_RS30525	0.53	+2.9
1,827,649	-		PFLU_RS30525	0.53	+2.3
1,827,653	+		PFLU_RS30525	0.53	+2.0
1,827,654	-		PFLU_RS30525	0.53	+2.2
1,827,673	-		PFLU_RS30525	0.56	+2.1
1,827,673	-		PFLU_RS30525	0.56	+2.0
1,827,673	-		PFLU_RS30525	0.56	+3.5
1,827,673	-		PFLU_RS30525	0.56	+3.3
1,827,673	-		PFLU_RS30525	0.56	+2.6
1,827,773	+		PFLU_RS30525	0.69	+3.9
1,827,773	+		PFLU_RS30525	0.69	+3.9
1,827,773	+		PFLU_RS30525	0.69	+2.6
1,827,774	-		PFLU_RS30525	0.69	+0.8
1,827,774	-		PFLU_RS30525	0.69	+3.9
1,827,774	-		PFLU_RS30525	0.69	+3.1
1,827,774	-		PFLU_RS30525	0.69	+2.5
1,827,786	+		PFLU_RS30525	0.71	+4.4
1,827,786	+		PFLU_RS30525	0.71	+4.2
1,827,786	+		PFLU_RS30525	0.71	+2.3
1,827,787	-		PFLU_RS30525	0.71	+3.4
1,827,796	-		PFLU_RS30525	0.72	+3.2
1,827,837	+		PFLU_RS30525	0.77	+3.5
1,827,838	-		PFLU_RS30525	0.77	+1.5
1,827,852	-		PFLU_RS30525	0.79	+2.9
1,827,875	+		PFLU_RS30525	0.82	+1.6
1,827,876	-		PFLU_RS30525	0.82	+2.8
1,827,896	+		PFLU_RS30525	0.85	+3.0
1,827,920	+		PFLU_RS30525	0.88	+4.7
1,827,920	+		PFLU_RS30525	0.88	+2.0
1,827,920	+		PFLU_RS30525	0.88	+1.6
1,827,920	+		PFLU_RS30525	0.88	+3.2
1,827,921	-		PFLU_RS30525	0.88	+2.5
1,827,921	-		PFLU_RS30525	0.88	+3.0
1,827,925	+		PFLU_RS30525	0.89	+3.6
1,827,926	-		PFLU_RS30525	0.89	+2.3
1,827,926	-		PFLU_RS30525	0.89	+1.9
1,827,933	+				+3.9
1,827,934	-				+2.8
1,827,934	-				+2.3
1,827,937	+				+3.2
1,827,937	+				+3.6
1,827,937	+				+1.6
1,827,937	+				+3.6
1,827,937	+				+1.3
1,827,937	+				+5.0
1,827,938	-				+4.0
1,827,938	-				+2.1
1,827,938	-				+2.5
1,827,972	+				+0.2
1,827,980	+				+1.6
1,827,980	+				+1.4
1,827,981	-				+4.1
1,827,997	+				+3.1
1,827,998	-				+3.1
1,828,024	+				+1.7
1,828,028	-				+3.7
1,828,100	+		PFLU_RS30530	0.14	+1.9
1,828,100	+		PFLU_RS30530	0.14	+3.7
1,828,100	+		PFLU_RS30530	0.14	+3.1
1,828,101	-		PFLU_RS30530	0.14	+1.7
1,828,101	-		PFLU_RS30530	0.14	+4.0
1,828,101	-		PFLU_RS30530	0.14	+2.0
1,828,106	+		PFLU_RS30530	0.15	+1.4
1,828,106	+		PFLU_RS30530	0.15	+3.7
1,828,107	-		PFLU_RS30530	0.15	+3.1
1,828,107	-		PFLU_RS30530	0.15	+3.6
1,828,119	-		PFLU_RS30530	0.17	+3.7
1,828,155	-		PFLU_RS30530	0.23	+3.2
1,828,187	+		PFLU_RS30530	0.27	+3.0
1,828,188	-		PFLU_RS30530	0.27	+3.9
1,828,227	-		PFLU_RS30530	0.33	+1.3
1,828,230	+		PFLU_RS30530	0.34	-0.4
1,828,230	+		PFLU_RS30530	0.34	+3.6
1,828,230	+		PFLU_RS30530	0.34	+2.6
1,828,230	+		PFLU_RS30530	0.34	+1.1
1,828,230	+		PFLU_RS30530	0.34	+3.7
1,828,230	+		PFLU_RS30530	0.34	+1.0
1,828,230	+		PFLU_RS30530	0.34	+5.1
1,828,230	+		PFLU_RS30530	0.34	+3.8
1,828,231	-		PFLU_RS30530	0.34	+2.2
1,828,231	-		PFLU_RS30530	0.34	+3.7
1,828,231	-		PFLU_RS30530	0.34	+3.0
1,828,231	-		PFLU_RS30530	0.34	+2.2
1,828,231	-		PFLU_RS30530	0.34	+3.5
1,828,231	-		PFLU_RS30530	0.34	+1.5
1,828,231	-		PFLU_RS30530	0.34	+1.6
1,828,231	-		PFLU_RS30530	0.34	+2.7
1,828,231	-		PFLU_RS30530	0.34	+3.1
1,828,231	-		PFLU_RS30530	0.34	+4.5
1,828,231	-		PFLU_RS30530	0.34	+1.3
1,828,231	-		PFLU_RS30530	0.34	+1.6
1,828,238	-		PFLU_RS30530	0.35	+2.8
1,828,426	+		PFLU_RS30530	0.63	+3.6
1,828,440	-		PFLU_RS30530	0.65	+2.7
1,828,476	-		PFLU_RS30530	0.71	+2.5
1,828,499	+		PFLU_RS30530	0.74	+4.2
1,828,499	+		PFLU_RS30530	0.74	+4.2
1,828,559	+		PFLU_RS30530	0.83	+2.8
1,828,560	-		PFLU_RS30530	0.83	+3.2
1,828,604	-				+2.1
1,828,604	-				+2.2
1,828,613	+				+0.6
1,828,700	+				+0.6
1,828,714	+				+3.0
1,828,725	-				+2.6
1,828,725	-				+3.9
1,828,771	+				+0.4
1,828,911	-		PFLU_RS08180	0.23	+1.5
1,828,915	+		PFLU_RS08180	0.24	+2.1
1,828,935	+		PFLU_RS08180	0.26	+3.8
1,828,935	+		PFLU_RS08180	0.26	+1.9
1,828,958	+		PFLU_RS08180	0.28	+2.5
1,828,959	-		PFLU_RS08180	0.28	+4.7
1,828,959	-		PFLU_RS08180	0.28	+3.4
1,828,986	-		PFLU_RS08180	0.31	+2.6