Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16110

Experiment: Ferulic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid 2 mM (C)
3,658,727	+				+0.4
3,658,727	+				+2.2
3,658,727	+				+0.6
3,658,728	-				+0.6
3,658,753	+				-0.3
3,658,753	+				+0.0
3,658,822	+				+2.2
3,658,823	-				-2.2
3,658,828	+				+0.0
3,658,828	+				-1.8
3,658,828	+				+1.2
3,658,829	-				-2.7
3,659,113	+		PFLU_RS16105	0.38	-0.7
3,659,113	+		PFLU_RS16105	0.38	+1.7
3,659,113	+		PFLU_RS16105	0.38	-0.7
3,659,114	-		PFLU_RS16105	0.38	-1.2
3,659,114	-		PFLU_RS16105	0.38	+0.5
3,659,119	+		PFLU_RS16105	0.39	-1.0
3,659,119	+		PFLU_RS16105	0.39	-0.7
3,659,119	+		PFLU_RS16105	0.39	+0.6
3,659,120	-		PFLU_RS16105	0.39	-0.4
3,659,294	+		PFLU_RS16105	0.62	+0.2
3,659,294	+		PFLU_RS16105	0.62	-1.4
3,659,294	+		PFLU_RS16105	0.62	+1.7
3,659,294	+		PFLU_RS16105	0.62	-1.7
3,659,294	+		PFLU_RS16105	0.62	-1.4
3,659,295	-		PFLU_RS16105	0.62	+0.8
3,659,295	-		PFLU_RS16105	0.62	-1.1
3,659,295	-		PFLU_RS16105	0.62	+1.2
3,659,295	-		PFLU_RS16105	0.62	+0.1
3,659,314	+		PFLU_RS16105	0.64	-0.4
3,659,314	+		PFLU_RS16105	0.64	+0.2
3,659,315	-		PFLU_RS16105	0.64	-2.5
3,659,315	-		PFLU_RS16105	0.64	-0.8
3,659,315	-		PFLU_RS16105	0.64	-0.8
3,659,315	-		PFLU_RS16105	0.64	+0.2
3,659,576	+				-0.4
3,659,576	+				+0.4
3,659,576	+				+0.5
3,659,577	-				+0.1
3,659,578	+				-1.4
3,659,578	+				+0.8
3,659,578	+				-1.0
3,659,578	+				-0.8
3,659,578	+				+0.2
3,659,578	+				-0.2
3,659,579	-				-1.6
3,659,579	-				-0.6
3,659,610	+				-1.2
3,659,610	+				-1.7
3,659,610	+				-0.5
3,659,610	+				-1.5
3,659,611	-				-2.2
3,659,612	+				-2.2
3,659,612	+				+0.8
3,659,613	-				-1.5
3,659,613	-				-0.8
3,659,613	-				+0.6
3,659,613	-				-2.3
3,659,650	+				+0.7
3,659,714	-				-2.2
3,659,733	+				-2.2
3,659,734	-				-3.0
3,659,734	-				-0.4
3,660,051	+		PFLU_RS16110	0.25	+0.2
3,660,051	+		PFLU_RS16110	0.25	-0.6
3,660,052	-		PFLU_RS16110	0.25	+0.8
3,660,052	-		PFLU_RS16110	0.25	-1.4
3,660,066	+		PFLU_RS16110	0.26	+1.8
3,660,067	-		PFLU_RS16110	0.26	+0.4
3,660,067	-		PFLU_RS16110	0.26	-0.1
3,660,612	-		PFLU_RS16110	0.63	+1.3
3,660,723	+		PFLU_RS16110	0.71	+0.8
3,660,864	+		PFLU_RS16110	0.80	-0.8
3,660,864	+		PFLU_RS16110	0.80	+1.0
3,660,864	+		PFLU_RS16110	0.80	-0.3
3,660,864	+		PFLU_RS16110	0.80	+2.2
3,660,864	+		PFLU_RS16110	0.80	-1.2
3,660,864	+		PFLU_RS16110	0.80	+1.6
3,660,865	-		PFLU_RS16110	0.80	+0.3
3,660,865	-		PFLU_RS16110	0.80	-0.7
3,660,865	-		PFLU_RS16110	0.80	-1.0
3,661,124	+				-0.8
3,661,172	+				-1.4
3,661,172	+				-1.1
3,661,172	+				-1.2
3,661,172	+				-0.4
3,661,173	-				-1.7
3,661,173	-				-1.2
3,661,192	+				+0.2
3,661,193	-				-0.7
3,661,227	-				-1.7
3,661,255	+				+1.2
3,661,255	+				-1.2
3,661,256	-				+0.7
3,661,272	+				-2.0
3,661,273	-				-0.8
3,661,291	+				+0.0
3,661,291	+				-0.7
3,661,291	+				+0.2
3,661,292	-				+0.3
3,661,292	-				-1.7
3,661,292	-				-1.4
3,661,355	+				+0.4
3,661,355	+				-2.2
3,661,361	+				-2.0
3,661,368	-				+1.5
3,661,374	+				+0.6
3,661,374	+				+0.7
3,661,375	-				-0.7
3,661,418	+				-1.7
3,661,418	+				+0.2
3,661,419	-				+1.2
3,661,724	+		PFLU_RS16115	0.17	+0.8
3,661,849	+		PFLU_RS16115	0.24	-1.0
3,661,849	+		PFLU_RS16115	0.24	-1.3
3,661,850	-		PFLU_RS16115	0.24	-0.4
3,661,850	-		PFLU_RS16115	0.24	+0.7
3,661,850	-		PFLU_RS16115	0.24	-0.2
3,661,949	-		PFLU_RS16115	0.30	-0.6